Cyclopterus lumpus (lumpfish): 117749455
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Entry
117749455 CDS
T09199
Symbol
prpf4bb
Name
(RefSeq) pre-mRNA processing factor 4Bb
KO
K08827
serine/threonine-protein kinase PRP4 [EC:
2.7.11.1
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
clum01001
]
117749455 (prpf4bb)
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117749455 (prpf4bb)
Enzymes [BR:
clum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
117749455 (prpf4bb)
Protein kinases [BR:
clum01001
]
Serine/threonine kinases: CMGC group
DYRK family [OT]
117749455 (prpf4bb)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
117749455 (prpf4bb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Pox_ser-thr_kin
Pkinase_fungal
CSTF_C
CoV_S1_C
Motif
Other DBs
NCBI-GeneID:
117749455
NCBI-ProteinID:
XP_034415894
Ensembl:
ENSCLMG00005009339
UniProt:
A0A8C2XIR3
LinkDB
All DBs
Position
20:5472342..5480955
Genome browser
AA seq
1021 aa
AA seq
DB search
MADVEIDIASTRMNNGNEHVKQDLESQEKSANEESGEMSEEEEEEEQAEANGEKTEDGPK
HHSSSGGKHKRKKHKHRSKHKKHKHASDEDKDRKRKHRHKHRKHKRKEVASPSGAALFAP
SGHKKVESSPSSGNPSLDDRALLEDLEKRRAMIKAELDSQLMEGKVQSGMGLILQGYNSG
SEEDGDGRIRNGEPRQRGSSGKPISPRGGKGGKSRRDSTEGSKSSSKRRSRSKSAERLGQ
TKESKPDKVTKTTKDTAVKDRSRGRSRSKDRKHSDSTDRSKERAGKSNSPTAWRGEQKGS
RTDKRSSPQREDRPNQERVGRRSRSPGRERPSRLDADRDKRPAKSPSKDASSGKENRSPH
RRGLHSPMRKRSASPRHRDAHHPPASASDRTSKPSYSPPKTRSPPRRPRSRSPDVRRRDV
DRQDSPMRKRIRPDAGGPGRDWSRENSPRSAARRRMSRSPLRRRSPSPRRRSRSSPRRRS
RSPLGHRFGERDRYGRLRQYRRSMSRDRGRRRRRSRDEDKFKGSLSEGMKVDKESSGEEV
LEDFDGEEVDEEFVIEQRRQQRLAIVQKYKVASDDTNMVSEPSSPQSSTRSRSPSPDDIL
ERVAADVKEYERENLDTFEASIKAKHNLIAQEKDGANPKKPSAPDMFTESDDMFAADFDN
ARMRAAGVGKDFKENPNLRDNWTDAEGYYRVNIGETLDKRYDVYGYTGHGVFSNVIRARD
TARAGQEVAVKIIRNNELMQKTGLKELEFLKKLNDADPDDKFHCLRLFRHFYHKQHLCLV
FEPLSMNLREVLKKYGKDVGLHIKAVRSYSQQLFLALKLLKRCNILHADIKPDNILVNES
KTILKLCDFGSASHVADNDITPYLVSRFYRAPEIIIGKPYDYGIDMWSVGCTLHELYTGK
ILFPGSSNNHMIKLAMDLKGKMPNKMIRKGLFKDQHFDQNLNFLYIEVDKVTEREKVTVM
STINSTKDLLTDMIGCQRLPEDQRKKVMMLKDLLDSTLMLDPAKRISINQALQHPFIQEK
I
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atggccgacgttgagatagacatcgcgtccacaagaatgaataatggcaacgaacacgtg
aagcaggatctggagagccaagaaaaaagtgccaatgaggaaagcggagagatgtcggag
gaagaagaggaggaagagcaggcagaggctaacggggagaagacagaagatgggcccaaa
catcacagcagcagtggcggcaaacacaagaggaaaaaacacaagcatcgcagtaagcac
aaaaagcacaagcatgcctctgatgaggacaaggaccgcaaacggaagcaccgtcacaaa
cacaggaaacacaagcgcaaagaggttgcctctccctccggtgctgccctctttgccccc
tccggccacaaaaaagttgaatcctctccctcctctggaaatccaagtctggacgacagg
gccttgctggaggatttggagaagcggagggccatgatcaaagctgagctggacagccag
ttgatggagggcaaggtccagtcaggaatgggccttatccttcagggttataactctgga
tctgaagaggacggagatggtaggatcagaaatggtgaaccgcgtcaaaggggcagctca
ggtaaacccatatctcccagagggggaaaaggagggaaatctagacgggactcaacagag
ggcagtaagtccagctccaagcgtcgcagtcggagtaagtcagcggagaggctcggacag
accaaggagtctaagccagacaaggtgaccaaaaccaccaaggacacagctgttaaagac
agaagccgtggcagaagccggtcgaaagacagaaagcattcggacagcaccgataggtcc
aaggagagagccgggaagtccaactcccccaccgcctggagaggagagcagaaaggcagc
cgcactgataaacgttcctctccacagcgcgaagacagaccaaatcaggagagagtgggg
cgacggtcccgatcacctggacgagaacgaccaagtcgcttagatgctgaccgggacaaa
cgaccagccaagtccccgtccaaggatgcttcatcggggaaggagaaccgctcccctcat
cggcgaggccttcacagccccatgaggaaacgaagcgcttcccctcgtcacagagatgcc
caccaccccccggctagtgcctcagacaggacctcaaagccgagctactctccacccaaa
accaggtctccccccaggagaccccgcagccgctcgccagacgtcaggaggagggatgtt
gacaggcaggactccccaatgaggaagcgcatacggccagatgcaggaggaccaggcaga
gattggtcacgtgagaacagtcccagatcagccgctcggcgcaggatgagtcgctcacct
ttaagacggcggtcgccgtcaccacggcgacgctcccggtcttccccccgcagacggagc
aggtctcccttgggacacaggtttggagagagagacaggtatggaaggctccggcagtac
cgacgctcaatgtcccgcgatcgaggcaggagaagaagacgcagcagagatgaggacaag
ttcaagggaagcctttcagagggcatgaaagttgacaaagagtcctcgggggaagaagtg
ttggaggacttcgacggagaggaggttgatgaagaatttgtcattgaacagcgccggcag
caacgtttggccatagtccagaaatacaaggtcgcgagcgacgacaccaacatggtgtcg
gagcccagcagcccccagagcagcacgcgcagccgatcgccgtcacccgatgacatcctg
gagcgagtcgccgcggacgtcaaggagtatgaacgagagaacctcgacaccttcgaggcc
agcatcaaagccaagcacaacctcatcgcccaggagaaagacggagccaacccaaagaag
ccttcagcccccgacatgtttacagagtcggacgacatgttcgctgctgactttgataat
gccaggatgagagcggcaggtgtcgggaaggatttcaaggagaaccccaaccttagggac
aactggactgatgctgagggttactaccgggtgaacattggggagacactagacaagcgc
tatgatgtgtatggctacaccggccatggtgttttcagcaacgtgatcagagccagggac
actgccagggccggccaggaggtggcagtcaagatcatccgcaacaatgagctcatgcag
aagaccggattaaaagagttagagtttctcaagaagctgaatgacgccgatcctgacgac
aagttccactgccttcgcctcttcaggcacttctaccacaagcagcatctctgtctggtc
tttgagcctctcagcatgaatctgcgtgaggtcttgaagaagtacggtaaagacgttggg
ctccacattaaggcggtgcgctcctacagccagcagctcttcttggccctcaagctgctg
aagcgatgcaacatactccacgctgacatcaagccagacaacatcctggtgaacgagtca
aagaccattttgaagctttgtgactttggctcggcgtcccacgtcgccgacaacgacatc
acaccgtacctggtcagcaggttctacagagctccggagatcatcatcggaaagccgtac
gactacgggatcgacatgtggtctgtcggctgcactttacatgagctttacactggcaaa
atcctgttccccggatcctccaacaatcacatgatcaaactagcgatggacctgaagggc
aagatgcccaacaagatgatccgtaaaggcctgttcaaagaccagcacttcgatcagaat
ttgaacttcctgtacattgaagtagacaaagtgacggaaagggagaaggtgacggtgatg
agcaccatcaactccaccaaagacctgctgacagacatgataggatgccagcgactgcct
gaggaccagaggaagaaggtgatgatgctgaaggacctgctggacagcaccctgatgctg
gacccggccaaacgcatcagcatcaaccaggctctgcagcacccctttatccaggagaag
atctga
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