Cyclopterus lumpus (lumpfish): 117749460
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Entry
117749460 CDS
T09199
Name
(RefSeq) cadherin-12-like
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117749460
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Major cadherins
117749460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_4
Stevor
RET_CLD1
TM_ErbB1
DUF443
Motif
Other DBs
NCBI-GeneID:
117749460
NCBI-ProteinID:
XP_034415911
Ensembl:
ENSCLMG00005009087
LinkDB
All DBs
Position
20:complement(2885587..2938629)
Genome browser
AA seq
803 aa
AA seq
DB search
MLTRNCLLLFLWILVDEGSVSSLRPPSPALGRSRVAREHARGLVGPMRNGAAGFQRVKRG
WVWNQFFVLEEYMGSDPQYVGKLHTDLDGGHSAVKYTLSGDGAGSIFTIDQTTGDIHALR
SLDREAKPYYTLRAQAVDIDTNRPLEPESEFVIKVQDINDNEPKFLEGPYTATVPEMSPV
GTYVTQVTATDADDPTYGNSARVVYSILHGQPYFSVDPKTGVIKTALPNMDREVKEQYQV
LIQAKDMGGQLGGLAGTTTINISLSDVNDNPPRFSKSFFHLRVPESSSVGSAVGRIKAHD
LDVGRNAEVEYTIVPGDGGAMFGITTNEHNQEGIIILKRPLDYESKKAYTFKVDASNAHL
DPRYQSFGAFKDTATVKINVLDVDEPPVFNKPSYVMDVYEDTPAGTIIGAVTAQDLDASS
GPVRYSIDWKSDMDSYFDIDPVEGTISTNELLDRESIARHNISIVATKLNSPVLTSRVAV
TVNVLDINEFPPELASPHETFVCENAKMGQVIQTFGAKDEDLPTAGQRFSFKSPKDDMKN
KNFTIRDFGNNTAGIVTKRNGFRRRLQEIYFLPVVIDDNGYPPKSSTGTLTVRVCGCESN
GSLLTCSAEAIFLPVGLSTGALVAILLCIVILLVIVVLYVGLRRQKKKETLMSSKEDIRD
NVIHYDDEGGGEEDTHAFDMGTLRNPKVVKENLFRRDVKPEMRRGPRPPVSQDSADIRDF
INQRLKEHDVDNAAPPYDSLATYAYEGDGSVAESLSSIDTLAVDVEEDYDYLDDWGPRFK
TLAGIFGEQSETQSDSTTTENTH
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atgctaacaaggaactgcctgctgctgttcctttggattctcgtcgacgaaggctcggtc
tcctccctgcgtccgccgtcgccggcactgggacgcagcagggtggcgcgggagcacgcc
agaggcttggtgggcccgatgaggaatggggcggccggatttcaacgagtcaagaggggc
tgggtgtggaaccagttctttgtgctcgaggagtacatggggtcggacccgcagtacgtg
ggcaagctgcacactgacctcgacggggggcacagcgcggtgaagtacactctctcggga
gacggggccggctccattttcaccatcgaccaaacgaccggggacatccacgccttaagg
agtctcgacagggaggcgaagccttactacaccctccgcgcccaggctgtcgacatcgac
accaacaggcccctcgaacccgaatcggaattcgtcatcaaggttcaagacatcaacgac
aatgagccgaagttcctggagggaccgtacacggccactgtgcccgagatgtccccagta
gggacgtatgtgacgcaggtgacggccacagatgcagacgatcccacctatggaaacagt
gccagagtggtgtacagcatcctccacggccagccgtacttctccgttgatcccaaaaca
ggtgttataaagaccgcgttgcccaatatggaccgagaggtgaaggaacagtaccaggtg
ttaatccaggccaaggacatggggggccagctgggggggctggccgggaccaccaccatc
aacatcagcctcagcgacgtcaacgacaacccgcccaggttctccaaaagtttcttccac
ctccgggttcccgagtcgtcttcggtgggctccgccgtgggccggatcaaagcccacgac
ctggacgtcgggaggaacgccgaagtggagtacaccatcgtgcccggtgacggcggcgcc
atgttcggcatcaccaccaacgaacacaaccaggaggggatcatcattctcaaaaggccc
ctggactatgaaagcaagaaggcgtacaccttcaaggtagatgcctccaatgctcatctg
gatccacgataccaaagcttcggggccttcaaagacacggcaacggtgaagattaacgtt
ttggatgtggatgagcccccggtgttcaataagccctcctatgtgatggatgtgtacgag
gacacacccgcgggcaccattatcggagcggtgacggctcaggatttagatgccagcagc
ggtccagtcaggtattccatcgactggaagagtgacatggacagctactttgacatcgac
ccagtggaggggaccatttccaccaacgaactcctcgacagggagagcatcgcccggcac
aatatctccatcgtggcgaccaaacttaacagtccggttctgaccagtcgggtggccgtc
accgtcaacgtgctggacatcaacgagttcccgcccgagctcgccagtcctcacgagacc
ttcgtttgtgaaaacgccaaaatgggacaggtgattcagacattcggtgcaaaagacgag
gatctgccaactgctgggcaacggttctccttcaaatcaccaaaagatgacatgaagaac
aagaacttcaccatccgggactttggaaacaacacagccggaatcgtgaccaagcggaac
ggcttccgacggcgtctgcaggagatctacttcctccccgtggtgatcgacgacaacggc
taccctccgaagagcagcaccggcaccctgaccgtccgcgtgtgcggctgcgaatccaac
ggctccctgctcacctgcagcgccgaggccatctttctccccgtgggcctcagcacggga
gccctggtcgccatcctcctgtgcatcgtcatcctgttggtaatcgtggtcctctacgtg
ggcttgaggcggcagaagaaaaaagaaaccctcatgtcatccaaagaggacatccgggat
aatgtgatccactacgacgacgaaggcggcggcgaggaggacacgcacgcgttcgacatg
gggacgcttcgcaaccccaaggtcgtcaaagagaacctgttccgcagggacgtcaaaccc
gagatgagaagaggtcccaggccgccggtctcgcaggacagcgctgacatccgagatttc
atcaaccagcggctgaaagagcacgacgtggacaacgcggcgccgccctacgactccttg
gccacgtacgcttacgagggcgacggctcggtggcggagtcgctcagctccatcgacact
ctcgccgtagacgtcgaggaggactatgattacctcgacgactgggggccacgctttaag
actctggcggggatatttggggaacagtcggaaactcagtcggactcgaccactacggag
aacacacattga
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