KEGG   Cyclopterus lumpus (lumpfish): 117749536
Entry
117749536         CDS       T09199                                 
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle
  KO
K24495  myomesin
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    117749536 (myom1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:clum04990]
    117749536 (myom1b)
Domain-containing proteins not elsewhere classified [BR:clum04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type III domain-containing proteins
   117749536 (myom1b)
SSDB
Motif
Pfam: I-set fn3 Ig_3 Ig_2 Ig_DSCAM-DSCAML_C ig V-set Pur_ac_phosph_N Ig_J_second Ig_CD22 C2-set_3 AAA_31 baeRF_family7
Other DBs
NCBI-GeneID: 117749536
NCBI-ProteinID: XP_034416041
Ensembl: ENSCLMG00005019225
LinkDB
Position
20:6311574..6336279
AA seq 1567 aa
MAGSIPFYQKNHRHYDRDYRSKETESKLSQYQTSSRYSAGGRTSSTSSTTSRSGGLKVTS
YSGLEASRLSPVPKGVKPTYLAVDKENQIIGYVVPIFRGSLEFSDTEETRVRDTAAYMAR
RDLFTSGLEMERSEQTSRREAIRESAERISLNKRIYEHGEHFKCMNEDSLMHAPEFVIKP
RSHTVWEKQCVRLHCTLTGWPDPRVVWYKNNVPIETLSNAGKYKLESRYSVHSLEINRCD
FDDTAQYRVSAMNSKGELSAFASVVVKRFRGELDESLPSPRRKYGPVSEYGINFQTHIVD
KFGVSFGREGETMSLGCTVIIYPALHRYQPEIQWYRDDVLLSPSKWNHMSWSGDRATLTL
THLNKEDEGLYTLRVTTKSGYETYSAYVFVRDAEAEVESAPGAPLDVRCLDANKDYIIVT
WKQPAVDGGDAILGYFVDRCEVGTTHWFQCNDTPVKFARFPVTGLVEGRSYMFRVRAVNQ
SGMSRPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGRPLELQVTEAT
KNYVVLSWNPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYSF
RVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPSKVVPTRNTDTSVVVSWEASKEAKELVG
YYIEGSIVDSNVWEPCNNKPVNATRFICHGLRTGEKYIFRVRAVNAAGLSQFSPESEPVE
VKAAIGGGIPHASPAPPYGITVLECVCDSMVLAWKQPSFIGGADITGYFVDYREVIDGVA
GKWHEANIRAISDRAYRVCDLKENKKYQFQVRAANMAGVGIPSLASDTFLCEEWTIAVPG
PPHDLQIREVRSDSLVLLWKPPVYQGRDPVNGFYIDIKEAGAPEEAWRGVNTKATEKAFI
KVANLKAGETFVFRVRAQNKAGVGQTSAVTEPVVALTKAGTKDIVVDVDDNGNISMNFEC
CDMTPDSKFVWSKNYEDITDPSRLTLETKGNKSKAVFNTPEEEDVGIYSCLVTHTDGASS
SYTLSEEELKRLLEVSHDHKFPIIPLKSALAVELLEKGKVRFWLQADKMSANGKVDYIFN
DNALSPGDKYKMNFDKNTGVIEMIMDSLTPADEGTFTFQLQDGKATNQSSLVLIGDVFKE
LQKESEFQMKEWVRKQGPHFIEYLGYEVTQECCVILKCKVGNMKKETSALWYKDGHQIKA
DESLGFTEGVLKLEIAQISKKDSGVYEVVLKDDRGKDTSKLNLTDQGFKDLMNEVFSFIA
NSSTPLKITSTDEGIRLYTFVNYYNDLLQVTWHYKDSAVSFSDRIKSGVVGEQLWLQITE
PTEKDTGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFKRLQATAIAERSRARVAGGLPD
VVTIQEGKALNLTCNISGDPLPEVTWLKNDREITSDDHCILKFASGKFASFTITAVNSSD
SGKYSILVKNKYGTESGDFTLEVTDGTPDLGVTSYSTDADGNVVFGPNTPKEKRKTTVTG
TKKQKGKESVTKTLSMEKIEEKDREKVAVEPEVSDSEQTKDAQEETADQPLTADQSEASE
LQRSLDQ
NT seq 4704 nt   +upstreamnt  +downstreamnt
atggcgggatctataccgttctatcagaagaaccatcgccactatgaccgcgactaccgt
agcaaggagacggagtctaagctgagccagtaccagaccagcagcagatactctgctggc
ggccgcacctccagcacctccagcaccaccagcaggagcgggggacttaaagtgacttca
tattctgggctggaggcgagcagactaagccccgttcccaagggagtcaagccaacttac
ttggctgtggataaagagaaccaaatcatcggctatgtagtgcctatcttcaggggcagt
ctagagttttcggacacagaggaaacgagggtgagggacactgctgcatacatggcccgc
agggatttgttcaccagtggcctggagatggagaggtcagagcagacctccaggagggag
gccatccgcgagtcggcggaacgcatctctctgaataaaaggatctatgaacacggggaa
cacttcaagtgcatgaacgaagacagcctgatgcacgccccggagtttgtgatcaaacca
cgctcccacaccgtgtgggagaagcagtgtgtgcggctgcattgcactctcaccggctgg
cctgacccccgggtcgtctggtacaaaaacaatgtgccaattgagactctttccaatgct
ggcaagtataaactcgagagcagatacagcgtgcactcactggagattaacagatgtgat
tttgatgacacggcgcagtatcgtgtctccgccatgaactccaagggagagctgtctgca
tttgcctccgtcgttgtcaagaggttcagaggtgaactcgatgagtccttgccatcaccc
agacgtaagtatggcccagtgtccgagtacggcatcaacttccagactcacattgttgat
aaatttggtgtgtcgtttggaagagagggtgagaccatgagtctgggatgcacggtcatc
atttacccagccctgcaccgctaccagcccgagatccagtggtacagagatgatgttctg
ctgtctccctctaaatggaaccacatgagctggagtggagaccgagccacgctgaccctc
acgcacctcaacaaggaggacgaggggctctacaccctgcgtgtcaccaccaagtctgga
tatgaaacctactccgcctacgtctttgtcagagatgctgaagccgaggttgagagcgct
ccgggtgcccctctggacgtgcgctgcctggatgccaacaaggattacatcattgtcacc
tggaagcagccagcggtcgatggtggcgacgccatcttgggctactttgtggacagatgt
gaggtcggaaccacccactggttccagtgcaatgacactccagttaaatttgcccgtttc
cccgtcaccggcctggtggagggacgctcctatatgttccgcgtgcgtgccgtcaaccag
agtggcatgagccgcccgtcccgagtctctgagccggtggctgccatggacccggctgac
cgcgcccgcatgagaggtacctccgctccgtggaccggccaaatcattgtcacagaggag
gagcctgcagagggcattgttcctggccggcctcttgagctgcaggtgacagaagcaacc
aagaactatgtggtgctgagctggaatccacctggagagaaaggccttgagggtgtcatg
tactatgtggaaaagtgtgtctcgggcacagacagctggcagagggtgaacacagagatc
ccagtcaagtctcctcgctttgcgctgtttgatctcgccgaggggaaatcctacagcttc
cgcgtccgctgctgcaactctgccggtgtgggcgagccgtccgacccaaccgaggccacc
accgttggcgacaagctcgacatcccatcggccccaagcaaagtcgtccccaccagaaac
acagacacgtccgtcgttgtgtcttgggaagcgtccaaggaggccaaggagttggtggga
tactacatcgaggggagcattgtggatagcaatgtgtgggagccgtgcaacaacaaacca
gtcaacgccaccaggttcatctgccatggtctgaggacgggagagaaatacatattcagg
gtgagggcagtgaacgcagcagggctcagccagttctccccagagtctgagcctgtggag
gtgaaggctgctattgggggcggcatccctcatgcctccccggctccaccctatggcatc
accgtcctggagtgtgtgtgtgactccatggtgctggcctggaaacagccgagcttcatc
ggcggtgctgacatcaccggctacttcgtggactatcgtgaggtcattgatggcgttgcg
gggaagtggcacgaggccaacatcagggccatcagcgaccgggcgtacagggtgtgtgac
ctgaaggagaacaagaagtaccagttccaggtgcgggcggccaacatggcaggtgtcggc
atcccttcactggccagtgacactttcctgtgcgaggagtggaccatcgccgtgccagga
cctcctcatgacctgcagataagagaggtgcgaagtgactctctggtgttgctatggaaa
ccacccgtgtaccagggccgcgatccggtcaacggtttctacatcgacatcaaggaagcg
ggcgccccagaggaggcgtggagaggagtcaacaccaaggccacggagaaggcgttcatc
aaggtcgccaatctgaaggcaggagagacgtttgtgttccgagtgcgcgctcagaataaa
gccggcgtgggacaaacctccgccgtgacggagccggtcgtagctctcaccaaagcaggc
accaaggacatcgtcgtggatgtcgacgacaacggcaacatctccatgaactttgagtgc
tgcgacatgacgcccgactccaaattcgtgtggtccaagaattacgaggacatcacggat
ccatcccgtctgactttggagaccaagggaaacaaatccaaagccgttttcaacactcct
gaggaggaagacgttggaatttactcatgtcttgtcacccacaccgatggggcttcatcc
agctacactctctcggaagaagagttgaagaggctgctggaggtcagtcatgaccacaag
ttccccattattcccctgaagtcagcgttggctgtggagctgctggagaagggcaaagtt
cgcttttggctgcaggcggacaagatgtcagctaacggcaaagtcgactacatcttcaac
gacaacgctctctctccgggggataaatacaagatgaactttgacaagaacaccggcgtg
attgagatgatcatggactctctgactccggcagatgagggcaccttcaccttccagctg
caggatgggaaagctaccaaccagtccagcttggtgctcataggagacgtgttcaaggag
ctgcagaaggaatcagagttccagatgaaagaatgggtcagaaagcaaggtcctcacttt
atcgagtatttgggttacgaggtgactcaagagtgctgcgttatactgaagtgcaaggtt
ggaaacatgaagaaggagacctcggcgctgtggtacaaagacggacaccagatcaaagca
gacgagagccttggcttcaccgagggagtcctgaaactggaaattgctcagatttccaag
aaggactctggtgtgtatgaggtcgtcctgaaggacgacagagggaaggacacgtccaag
ttaaatctgacagatcaaggtttcaaggacttgatgaatgaagtcttcagtttcatcgcc
aattcctccactccactgaagatcacgagcacagacgagggcatccgactctacaccttc
gtcaactactacaacgatttgctccaagtgacgtggcactataaggattcggccgtctcc
ttctccgaccgtataaagagcggcgtggtgggagagcagctgtggctgcagatcacagag
cccacagagaaagacacgggcaaatatgccattgagttcaacgatggaaaggggggcctg
aggaggactgttgagctgtctggtcaagcatttgacgatgcttttgcagagttcaagaga
ctgcaagctactgctattgctgagagaagccgtgctcgagtagcaggaggcctgcctgat
gtggtcacgatacaggagggcaaggctctcaatctcacctgcaacatctcgggcgaccct
ctgccagaggtcacctggctgaagaacgacagggagatcacgtccgacgaccactgcatc
ctgaagttcgcctcaggcaagttcgccagcttcaccatcaccgcggtgaactcgtcggac
tctggcaagtacagcatcctggtgaagaacaagtacggcacagagagcggggacttcact
ctggaggtcacagacgggacgcctgacttgggggtgacttcatactcgaccgatgcggac
ggaaatgtggtgtttggaccgaacaccccgaaggaaaagaggaaaaccacagtcactgga
acgaaaaagcagaaggggaaggaatctgtaactaagactctttcgatggaaaagattgaa
gagaaagatcgggagaaggttgcagttgaacccgaagtttcagattcagagcaaacaaaa
gatgctcaagaagaaactgctgaccagcctttgactgctgaccaatcagaagcctccgag
ctgcagagaagcctggaccagtag

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