Cyclopterus lumpus (lumpfish): 117749536
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Entry
117749536 CDS
T09199
Symbol
myom1b
Name
(RefSeq) M-protein, striated muscle
KO
K24495
myomesin
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117749536 (myom1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117749536 (myom1b)
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
117749536 (myom1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
fn3
Ig_3
Ig_2
Ig_DSCAM-DSCAML_C
ig
V-set
Pur_ac_phosph_N
Ig_J_second
Ig_CD22
C2-set_3
AAA_31
baeRF_family7
Motif
Other DBs
NCBI-GeneID:
117749536
NCBI-ProteinID:
XP_034416041
Ensembl:
ENSCLMG00005019225
LinkDB
All DBs
Position
20:6311574..6336279
Genome browser
AA seq
1567 aa
AA seq
DB search
MAGSIPFYQKNHRHYDRDYRSKETESKLSQYQTSSRYSAGGRTSSTSSTTSRSGGLKVTS
YSGLEASRLSPVPKGVKPTYLAVDKENQIIGYVVPIFRGSLEFSDTEETRVRDTAAYMAR
RDLFTSGLEMERSEQTSRREAIRESAERISLNKRIYEHGEHFKCMNEDSLMHAPEFVIKP
RSHTVWEKQCVRLHCTLTGWPDPRVVWYKNNVPIETLSNAGKYKLESRYSVHSLEINRCD
FDDTAQYRVSAMNSKGELSAFASVVVKRFRGELDESLPSPRRKYGPVSEYGINFQTHIVD
KFGVSFGREGETMSLGCTVIIYPALHRYQPEIQWYRDDVLLSPSKWNHMSWSGDRATLTL
THLNKEDEGLYTLRVTTKSGYETYSAYVFVRDAEAEVESAPGAPLDVRCLDANKDYIIVT
WKQPAVDGGDAILGYFVDRCEVGTTHWFQCNDTPVKFARFPVTGLVEGRSYMFRVRAVNQ
SGMSRPSRVSEPVAAMDPADRARMRGTSAPWTGQIIVTEEEPAEGIVPGRPLELQVTEAT
KNYVVLSWNPPGEKGLEGVMYYVEKCVSGTDSWQRVNTEIPVKSPRFALFDLAEGKSYSF
RVRCCNSAGVGEPSDPTEATTVGDKLDIPSAPSKVVPTRNTDTSVVVSWEASKEAKELVG
YYIEGSIVDSNVWEPCNNKPVNATRFICHGLRTGEKYIFRVRAVNAAGLSQFSPESEPVE
VKAAIGGGIPHASPAPPYGITVLECVCDSMVLAWKQPSFIGGADITGYFVDYREVIDGVA
GKWHEANIRAISDRAYRVCDLKENKKYQFQVRAANMAGVGIPSLASDTFLCEEWTIAVPG
PPHDLQIREVRSDSLVLLWKPPVYQGRDPVNGFYIDIKEAGAPEEAWRGVNTKATEKAFI
KVANLKAGETFVFRVRAQNKAGVGQTSAVTEPVVALTKAGTKDIVVDVDDNGNISMNFEC
CDMTPDSKFVWSKNYEDITDPSRLTLETKGNKSKAVFNTPEEEDVGIYSCLVTHTDGASS
SYTLSEEELKRLLEVSHDHKFPIIPLKSALAVELLEKGKVRFWLQADKMSANGKVDYIFN
DNALSPGDKYKMNFDKNTGVIEMIMDSLTPADEGTFTFQLQDGKATNQSSLVLIGDVFKE
LQKESEFQMKEWVRKQGPHFIEYLGYEVTQECCVILKCKVGNMKKETSALWYKDGHQIKA
DESLGFTEGVLKLEIAQISKKDSGVYEVVLKDDRGKDTSKLNLTDQGFKDLMNEVFSFIA
NSSTPLKITSTDEGIRLYTFVNYYNDLLQVTWHYKDSAVSFSDRIKSGVVGEQLWLQITE
PTEKDTGKYAIEFNDGKGGLRRTVELSGQAFDDAFAEFKRLQATAIAERSRARVAGGLPD
VVTIQEGKALNLTCNISGDPLPEVTWLKNDREITSDDHCILKFASGKFASFTITAVNSSD
SGKYSILVKNKYGTESGDFTLEVTDGTPDLGVTSYSTDADGNVVFGPNTPKEKRKTTVTG
TKKQKGKESVTKTLSMEKIEEKDREKVAVEPEVSDSEQTKDAQEETADQPLTADQSEASE
LQRSLDQ
NT seq
4704 nt
NT seq
+upstream
nt +downstream
nt
atggcgggatctataccgttctatcagaagaaccatcgccactatgaccgcgactaccgt
agcaaggagacggagtctaagctgagccagtaccagaccagcagcagatactctgctggc
ggccgcacctccagcacctccagcaccaccagcaggagcgggggacttaaagtgacttca
tattctgggctggaggcgagcagactaagccccgttcccaagggagtcaagccaacttac
ttggctgtggataaagagaaccaaatcatcggctatgtagtgcctatcttcaggggcagt
ctagagttttcggacacagaggaaacgagggtgagggacactgctgcatacatggcccgc
agggatttgttcaccagtggcctggagatggagaggtcagagcagacctccaggagggag
gccatccgcgagtcggcggaacgcatctctctgaataaaaggatctatgaacacggggaa
cacttcaagtgcatgaacgaagacagcctgatgcacgccccggagtttgtgatcaaacca
cgctcccacaccgtgtgggagaagcagtgtgtgcggctgcattgcactctcaccggctgg
cctgacccccgggtcgtctggtacaaaaacaatgtgccaattgagactctttccaatgct
ggcaagtataaactcgagagcagatacagcgtgcactcactggagattaacagatgtgat
tttgatgacacggcgcagtatcgtgtctccgccatgaactccaagggagagctgtctgca
tttgcctccgtcgttgtcaagaggttcagaggtgaactcgatgagtccttgccatcaccc
agacgtaagtatggcccagtgtccgagtacggcatcaacttccagactcacattgttgat
aaatttggtgtgtcgtttggaagagagggtgagaccatgagtctgggatgcacggtcatc
atttacccagccctgcaccgctaccagcccgagatccagtggtacagagatgatgttctg
ctgtctccctctaaatggaaccacatgagctggagtggagaccgagccacgctgaccctc
acgcacctcaacaaggaggacgaggggctctacaccctgcgtgtcaccaccaagtctgga
tatgaaacctactccgcctacgtctttgtcagagatgctgaagccgaggttgagagcgct
ccgggtgcccctctggacgtgcgctgcctggatgccaacaaggattacatcattgtcacc
tggaagcagccagcggtcgatggtggcgacgccatcttgggctactttgtggacagatgt
gaggtcggaaccacccactggttccagtgcaatgacactccagttaaatttgcccgtttc
cccgtcaccggcctggtggagggacgctcctatatgttccgcgtgcgtgccgtcaaccag
agtggcatgagccgcccgtcccgagtctctgagccggtggctgccatggacccggctgac
cgcgcccgcatgagaggtacctccgctccgtggaccggccaaatcattgtcacagaggag
gagcctgcagagggcattgttcctggccggcctcttgagctgcaggtgacagaagcaacc
aagaactatgtggtgctgagctggaatccacctggagagaaaggccttgagggtgtcatg
tactatgtggaaaagtgtgtctcgggcacagacagctggcagagggtgaacacagagatc
ccagtcaagtctcctcgctttgcgctgtttgatctcgccgaggggaaatcctacagcttc
cgcgtccgctgctgcaactctgccggtgtgggcgagccgtccgacccaaccgaggccacc
accgttggcgacaagctcgacatcccatcggccccaagcaaagtcgtccccaccagaaac
acagacacgtccgtcgttgtgtcttgggaagcgtccaaggaggccaaggagttggtggga
tactacatcgaggggagcattgtggatagcaatgtgtgggagccgtgcaacaacaaacca
gtcaacgccaccaggttcatctgccatggtctgaggacgggagagaaatacatattcagg
gtgagggcagtgaacgcagcagggctcagccagttctccccagagtctgagcctgtggag
gtgaaggctgctattgggggcggcatccctcatgcctccccggctccaccctatggcatc
accgtcctggagtgtgtgtgtgactccatggtgctggcctggaaacagccgagcttcatc
ggcggtgctgacatcaccggctacttcgtggactatcgtgaggtcattgatggcgttgcg
gggaagtggcacgaggccaacatcagggccatcagcgaccgggcgtacagggtgtgtgac
ctgaaggagaacaagaagtaccagttccaggtgcgggcggccaacatggcaggtgtcggc
atcccttcactggccagtgacactttcctgtgcgaggagtggaccatcgccgtgccagga
cctcctcatgacctgcagataagagaggtgcgaagtgactctctggtgttgctatggaaa
ccacccgtgtaccagggccgcgatccggtcaacggtttctacatcgacatcaaggaagcg
ggcgccccagaggaggcgtggagaggagtcaacaccaaggccacggagaaggcgttcatc
aaggtcgccaatctgaaggcaggagagacgtttgtgttccgagtgcgcgctcagaataaa
gccggcgtgggacaaacctccgccgtgacggagccggtcgtagctctcaccaaagcaggc
accaaggacatcgtcgtggatgtcgacgacaacggcaacatctccatgaactttgagtgc
tgcgacatgacgcccgactccaaattcgtgtggtccaagaattacgaggacatcacggat
ccatcccgtctgactttggagaccaagggaaacaaatccaaagccgttttcaacactcct
gaggaggaagacgttggaatttactcatgtcttgtcacccacaccgatggggcttcatcc
agctacactctctcggaagaagagttgaagaggctgctggaggtcagtcatgaccacaag
ttccccattattcccctgaagtcagcgttggctgtggagctgctggagaagggcaaagtt
cgcttttggctgcaggcggacaagatgtcagctaacggcaaagtcgactacatcttcaac
gacaacgctctctctccgggggataaatacaagatgaactttgacaagaacaccggcgtg
attgagatgatcatggactctctgactccggcagatgagggcaccttcaccttccagctg
caggatgggaaagctaccaaccagtccagcttggtgctcataggagacgtgttcaaggag
ctgcagaaggaatcagagttccagatgaaagaatgggtcagaaagcaaggtcctcacttt
atcgagtatttgggttacgaggtgactcaagagtgctgcgttatactgaagtgcaaggtt
ggaaacatgaagaaggagacctcggcgctgtggtacaaagacggacaccagatcaaagca
gacgagagccttggcttcaccgagggagtcctgaaactggaaattgctcagatttccaag
aaggactctggtgtgtatgaggtcgtcctgaaggacgacagagggaaggacacgtccaag
ttaaatctgacagatcaaggtttcaaggacttgatgaatgaagtcttcagtttcatcgcc
aattcctccactccactgaagatcacgagcacagacgagggcatccgactctacaccttc
gtcaactactacaacgatttgctccaagtgacgtggcactataaggattcggccgtctcc
ttctccgaccgtataaagagcggcgtggtgggagagcagctgtggctgcagatcacagag
cccacagagaaagacacgggcaaatatgccattgagttcaacgatggaaaggggggcctg
aggaggactgttgagctgtctggtcaagcatttgacgatgcttttgcagagttcaagaga
ctgcaagctactgctattgctgagagaagccgtgctcgagtagcaggaggcctgcctgat
gtggtcacgatacaggagggcaaggctctcaatctcacctgcaacatctcgggcgaccct
ctgccagaggtcacctggctgaagaacgacagggagatcacgtccgacgaccactgcatc
ctgaagttcgcctcaggcaagttcgccagcttcaccatcaccgcggtgaactcgtcggac
tctggcaagtacagcatcctggtgaagaacaagtacggcacagagagcggggacttcact
ctggaggtcacagacgggacgcctgacttgggggtgacttcatactcgaccgatgcggac
ggaaatgtggtgtttggaccgaacaccccgaaggaaaagaggaaaaccacagtcactgga
acgaaaaagcagaaggggaaggaatctgtaactaagactctttcgatggaaaagattgaa
gagaaagatcgggagaaggttgcagttgaacccgaagtttcagattcagagcaaacaaaa
gatgctcaagaagaaactgctgaccagcctttgactgctgaccaatcagaagcctccgag
ctgcagagaagcctggaccagtag
DBGET
integrated database retrieval system