Cyclopterus lumpus (lumpfish): 117749549
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Entry
117749549 CDS
T09199
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
clum
Cyclopterus lumpus (lumpfish)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117749549
NCBI-ProteinID:
XP_034416062
Ensembl:
ENSCLMG00005019924
UniProt:
A0A8C3AIW0
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All DBs
Position
3:23452575..23472754
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AA seq
1111 aa
AA seq
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MGQRAVLLLSELLLLLLTASRTLLAVSFPEDTVPLDVVDAHFARRYPVFRGRPSGNESQH
RLDFQLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQSDRDTCAVKGKHR
DECHNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEINGLARCPFDSKQTNV
ALFAEGKLYSATVADFQASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAAEYGNYVYF
FYREIAVEHSNLGKVVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFD
VLQSITDIININGLPSVVGVFTTQMNSIPGSAVCAFSMADIEKVFLGRFKEQKTPDSVWT
PFPEEKLPKPRPGSCAGHGPAASLKSSIEFPDDTLQFIKSHPLMDTAVPSIGDEPWFTKT
RVRYRMTALAVDNEAGPHKNYTVVFIGAESGVVLKVLAKTSSVSLNDSVLLEEIDVFNTA
KCLSNHEDDKRVLSLHVDKEAHSLYVAYSSCVIRIPLSRCERHSSCHKSCIASRDPYCGW
KPHGACERIQPGDVTGYEQDIELGYTAHLGDCHAFLGTTSAPDYKSFGDPTSDMEFSSTP
VTVHPSGPIHPPVLIPTQSPSSGPDPELYGSGFVLQDDPATSHSLDSIPGGQEGVWDIQA
GETNQMVHMNILITCVFAAFLMGALLAGLIVFCYRDSFLRKPRRVHKDAESAPSCSDSTG
SFVKLNGLFDSPVKEYQTNIDSPKLYTNLLSNGKDLNSPNGDTKTMILRDGCQPPELAAL
PTPESTPVLQQKSLQPIKNQWERAHPKASGPHKESNSSAKSPQFLLSSAGAPPNSNSIHP
HLALGHSLIPSAVVLPNATHDHSNLDSGEDTLPHSSERKLRNPDSKGSRKEQKRSVDARN
TLNDLLKHLNDSVANPQAILPEGSGPRPRQQLTLEPMEELTELPPKVPSREASLYSPSSS
LPRHSPTKRVDVPLPTTPTTPTGSLSMGGTLERQRGGYQLHRSASHRHSLSTSPNGVTMG
VSVSRQHSMNRGGYMPPTPPSRLDSQGGVMGAGMHSAHPSSAPRQSNYSGYGSLPRTGLK
RTPSLKPDVPPKPNGFSPQTPQMRVVNKYSY
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgggccagagagctgtgcttctgctcagtgagctgctgctgctgctgctgacagcctca
cgcactctcctcgcagtcagcttccccgaggacaccgtgcccctcgacgtcgttgacgca
cactttgcacggaggtaccctgtgttcagaggccggccctctggcaacgagtcacagcat
cgccttgactttcagctgatgaccaagatacaggacactctgttcatcgctggcagagat
caggtgtacctggtcagtctgagagagtcctacaggaatgagatcattccttacaggaag
ctgacgtggcgttcgggccagtcggacagagacacgtgtgccgtgaagggaaaacacaga
gacgagtgccacaacttcatcaaagtgctagttcccagaaacgacgacctggtgttcatc
tgcggcaccaacggcttcaaccccatgtgccgatactacaggctggataacctcgagttt
gacggagaggagatcaatggactggcacgatgcccatttgactccaagcaaaccaacgtt
gccctttttgctgaggggaagctgtattcggcaactgtagctgacttccaggccagtgac
gctgtcatctatcgcagtatgggtgatggatcagccctgaggaccatcaaatacgactcc
aaatggctgaaagaacctcatttcctgcacgcagcagagtatgggaattatgtgtacttc
ttctatcgggagattgcggtggagcacagcaatctgggcaaggttgtgtattctcgcgtg
gcccggatctgtaagaacgacgtcggcgggtcacagcgggtgctggaaaagcactggaca
tcttttgtgaaggcgaggctgaattgctcggtgccgggggagtccttcttctacttcgac
gtgctccagtccatcaccgacatcatcaacatcaacgggttgccctcggtggtcggtgtg
ttcaccacacagatgaacagtatcccagggtcagcagtgtgtgccttctccatggccgac
atagagaaagtgttcttgggacggttcaaagagcagaagactccggactcggtgtggact
ccgtttccagaggagaagcttcccaaacctcgacctgggagctgtgcgggtcacggtcca
gctgcgtccttaaagagctccatcgagttcccggacgacaccctgcagttcatcaagtcc
caccccctcatggacacagctgtgccttctattggggacgagccctggttcaccaagact
cgcgtcaggtacagaatgacagcgctggctgtggacaacgaagcaggacctcacaagaac
tacaccgtggtgttcatcggggccgagtctggggttgtcctcaaggttttggccaagacc
tcctccgtgtctctgaacgacagcgtgctcctggaggagatcgacgtcttcaacacggcc
aagtgcctgtctaaccacgaggatgacaagcgtgtcctctcgctgcacgtggacaaagag
gcacacagcctgtacgtggcctattcaagctgtgtcatccgtattcccctgagtcgctgt
gaaaggcattcttcctgccacaagtcctgcattgcatcaagggatccctactgtggctgg
aagcctcatggggcctgtgagagaatacagccgggtgatgtgactggatatgagcaagac
attgaattgggatacactgcccacttgggagactgccacgcgtttttgggcactacatca
gcgccagattacaaatcatttggcgaccctacctctgacatggagttttcatcaacgcca
gtcacagtccaccccagtgggcccatacaccccccagtactcatacccactcagagcccc
agctctgggcctgatccagagctctacggctcaggctttgtgctgcaggatgacccagcc
acctcccattctttagactctatcccagggggccaagagggagtgtgggatatccaagcc
ggtgagaccaaccagatggtccacatgaacatcctcatcacttgcgtgtttgctgccttt
ctcatgggtgccctcctggcgggtctgatagttttctgctaccgagactcattcctccgt
aagcccagacgtgtccacaaggatgcagagtcggcaccgtcctgctccgactccactgga
agctttgtcaagctcaatggcctctttgacagccctgtaaaggagtaccagaccaacatt
gattctcccaagctgtacaccaatctgctgagcaacggcaaagacctgaattcccccaac
ggagacacaaagaccatgatcttgagggatggctgtcagccccctgaactggctgccctg
cctacgcctgagtccacccctgtgcttcagcagaaaagcctgcagcccatcaaaaaccag
tgggagagggctcatccaaaggccagtggaccccataaggagtccaactcgtctgccaag
agtcctcagttccttctttcttctgctggtgctcctcctaactccaactccatccaccct
cacctcgccttgggacactccctcataccaagtgcggttgtcctgcccaatgccacacat
gaccactctaaccttgacagtggagaggatacactgccgcattcgtctgaaagaaagctg
aggaacccagactctaagggaagtaggaaagaacagaaaaggtctgtggatgcaagaaat
accctaaatgaccttttaaaacaccttaatgactcagtggcaaacccccaggccattctt
ccagaaggatcggggccacgcccaagacaacagctcactctggagcccatggaggaactg
actgaattaccccccaaggtgccgagccgtgaggcttccctgtactccccctcctcctcc
ctgccgaggcacagccccaccaagagggttgatgtgcccctgcccaccactcccacaacg
ccaacgggcagcctgagcatgggaggcaccctggagaggcaaagaggggggtatcaactc
caccggagtgcctctcacaggcactccctatccacctcgccaaatggggtaaccatgggg
gtgtctgtgtctcgccaacacagtatgaacagggggggttacatgcccccaacacccccc
tccagacttgactcccaaggcggagtgatgggggcgggaatgcactcagcccacccatcc
tctgctccccgacagagcaactacagtgggtatggctcactccctcgcacagggcttaaa
cggaccccatcgctaaagccagatgtgccccctaaacccaatgggttttcaccacagact
ccacagatgcgagtggtcaacaagtacagttattaa
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