Cyclopterus lumpus (lumpfish): 117749575
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Entry
117749575 CDS
T09199
Symbol
stau2
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 2
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117749575 (stau2)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117749575 (stau2)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117749575 (stau2)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
117749575 (stau2)
mRNA cycle factors
Stress granule specific factors
117749575 (stau2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
Motif
Other DBs
NCBI-GeneID:
117749575
NCBI-ProteinID:
XP_034416097
Ensembl:
ENSCLMG00005013845
UniProt:
A0A8C3G1Y1
LinkDB
All DBs
Position
20:complement(9953917..10030354)
Genome browser
AA seq
669 aa
AA seq
DB search
MAQVKVQTSAPLAGPGLSPGVSPTAMASPGSLGLQPSVNGTGPAPTPACPAPAVGYGDAP
VSSTSPGPPQENMANPKEKTPMCLVNELARFNRIQPQYKLLNERGPAHAKIFTVQLTLGE
QVWEAEGTSIKKAQHSTAAKALDESILPRPAPRSPKVDINSNPGSITPTVELNGLAMKRG
EPAIYRPLDPKPMPNYRANYNFRGMFNQRYHYPVPKIFYVQLSVGSHEFIGEGRTRQAAR
HNAAMKALQDLRDEPIPERPPQSPEEKGEPEDGPDASKSEISLVYEIALKRNLSVNFEVL
KESGPPHMKSFLTCVSVGEFSAEGEGNSKKLSKKRAALSILQDLKKLPFIPIVEKPKTHY
KKRTKTILKTGPDYGQGMNPISRLAQIQQAKKEKEPEYLLLSERGMPRRREFIMQVKVNS
EVATGTGPNKKVAKRNAAEEMLLQLGYKASTVPQNTPEMDNKGWNGQKAPFTEATSNTPK
GLLHLSPDVYQEMEASRKQGGSAPCPGSNGGGSVNYMTSKDMGPCSAPLPPGHPPYYSVS
GSSPSPTATMARELLLNGQSPTGDASLSMKGKNSALPCGVSVQPAQQLDYLAHIQGFQVQ
YSDAQSGKDFVTYLTLSPVQMTFHGTGSTLQASHDQAALSALKQLSEQGLDPVDGPIKTS
EPCGREDGH
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggctcaagtgaaagtacagacctcagcacccctggctggtcctggcctctcccccgga
gtttccccgacggccatggccagcccaggatccttgggtctgcagccctccgtcaacggc
acaggcccggcccccacacccgcctgccctgctcctgcagtcggatatggggacgcccct
gtgtcttctacatcgccaggcccgccccaggagaacatggcaaaccctaaagagaaaact
ccaatgtgtttggtgaatgagttagcccgtttcaataggatccaaccacagtacaagctc
ctcaatgagagaggccctgcacatgctaagatcttcacagtgcagctgactcttggggag
caggtgtgggaggccgagggcaccagcattaaaaaggcccagcactccacagccgccaaa
gcgctggacgagagtatccttcccaggccagcgccccgctcccctaaagtggacatcaac
agcaacccaggcagtataacacccacggtggagctgaatggtctggccatgaagagaggg
gagccagctatctacaggcccttggaccctaaacccatgcccaactacagagctaactac
aacttcagagggatgttcaaccaaaggtaccattatcctgttcctaagatcttctatgtg
cagctgtctgtggggagtcatgagtttattggtgagggacgcacccgccaagcagccaga
cacaatgctgccatgaaggccttgcaagacctgcgcgatgaacccatccccgaacggcca
ccgcagagcccggaggaaaaaggagagcctgaggacggccctgatgccagcaaatcagag
atcagcctggtctacgaaattgccctgaagaggaacttgtctgtcaactttgaggtgttg
aaggagagcggccccccgcacatgaaaagcttcctgacctgcgtcagcgtgggggagttc
tctgcagagggcgagggcaacagcaagaagctgtccaagaagcgtgctgctctgtccatc
ctgcaggacctgaagaagctgcccttcatccccatcgtggagaaacccaagacgcactac
aagaaacgcaccaagaccatcctcaagacaggaccagactatggccagggcatgaacccg
atcagccgtttggcccagatccagcaggccaagaaggagaaggagccagagtacctgctg
ctctctgaaagggggatgccccgacgccgggagttcatcatgcaggtgaaggtgaatagc
gaggttgccacgggaacaggacccaacaagaaggtggccaagcggaacgcagcagaggag
atgctcctgcagctgggatacaaggcctccacagtcccccagaacacccccgagatggac
aacaaaggctggaatggacaaaaggcgccatttaccgaagcgacgagtaacaccccgaag
ggtctgctccacctcagccctgacgtttaccaggagatggaggccagcaggaagcaaggg
ggcagtgctccgtgccctggcagcaacggtggcggctctgtcaactacatgacatccaaa
gacatggggccctgctctgccccgctgcccccaggacaccctccatactacagcgtttca
ggctcctcacccagcccaactgctaccatggcaagggagctgctgcttaatggtcagtca
cccacaggcgacgcctccctgtcaatgaaggggaagaactcggccctgccctgcggcgtc
tcggtgcagcctgcgcagcagctggactacctggctcacatccagggcttccaggtgcag
tacagtgatgcgcagagtggcaaggattttgtgacctatctgaccctctcccctgtgcaa
atgactttccacggcaccgggagcaccctccaagccagccatgaccaggctgctctaagt
gccttgaaacagctgtcggagcagggactggacccggtggatggccccatcaagaccagt
gaaccatgtgggagggaggatggacattaa
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