Cyclopterus lumpus (lumpfish): 117749579
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Entry
117749579 CDS
T09199
Symbol
arxa
Name
(RefSeq) aristaless-related homeobox protein
KO
K09452
homeobox protein aristaless-related
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117749579 (arxa)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117749579 (arxa)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117749579
NCBI-ProteinID:
XP_034416105
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Position
20:complement(10787731..10794548)
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AA seq
471 aa
AA seq
DB search
MNRRVDMSGQFEEDIHDRGERKSKSPTLLSSYCIDSILGRRSPCKVRLIGAQSLTGLPGR
VELDKTADRPTKDPLSLSADMHLPPKLRRLYGAGGKYLHDHAETLERERLLMEQASDSLK
ISHAPQVSISRSKSYRENASLSRGEGDQSPGEGSEDGSLGLVELGPLKFEEEAGKEEESS
GDAAALSPKDEERESLNAGDGDVRDGEDSVCLSAGSDSEEGMLKRKQRRYRTTFTSYQLE
ELERAFQKTHYPDVFTREELAMRLDLTEARVQVWFQNRRAKWRKREKAGVQAHPSGMPFP
GPLTAGHPLSHYLDGGPFPPHHHPALESAWTAAAAAAAAFPGLAPQHHNGSAPPLATQLG
LGTFLGTAAMFRHPAFIGPTFGRLFSGMGPLSSASTAAALLRQPAPPVENLSHAGPVLPD
PSSSSSSPSSAAAADRRASSIAALRLKAKEHSAQLTQLNILPTGTAGKEVC
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgaagagtcgatatgagcggtcagtttgaggaagatatccacgaccggggcgag
aggaagagtaaatccccgacgctgctctcctcttactgcatagacagcattctgggccgc
cggagtccctgtaaggtccgactgataggggcgcaaagtttgacgggtctgcccggcaga
gtggagctcgacaaaacggctgacaggccaacgaaagaccccctttctctgagcgctgac
atgcacctgccacccaagctccgccggctgtacggagccggggggaagtacctgcacgac
cacgcggagacgctggaaagggagcggctcctcatggagcaagccagcgacagcctcaaa
atcagccacgcgccgcaggtgagcatcagccgcagcaagtcctaccgggagaacgcgtcg
ctgagccggggagagggcgaccagagccccggggagggctcggaggacggcagcctggga
ctggtggagctcggcccgttgaagttcgaggaggaagcagggaaggaggaggagagcagc
ggggacgcggccgctctgtccccgaaggacgaggagagggagagcttgaacgccggggat
ggggacgtgagggacggggaggacagcgtgtgtctgtcggcgggcagtgactcggaggaa
ggaatgctgaaacggaagcagagaagatacaggactaccttcaccagttaccagctggag
gagctggagagggctttccagaagacacactaccccgacgtcttcaccagagaagagctc
gcgatgcgtctagatcttaccgaggcccgtgtccaagtttggtttcagaaccgcagggcc
aagtggaggaagcgcgaaaaggccggggtgcaggcccacccgtcgggcatgccgttcccg
ggcccccttacagcgggacaccctctcagccactacctggacggggggcccttcccccct
caccaccatcctgccctcgagtccgcctggacagctgctgcagctgcagccgcggccttc
ccgggcctggcccctcaacaccacaacggctctgctccaccactggccacccaactcggc
ctgggcactttcctgggcacggctgccatgttccgccaccctgccttcattggacccact
tttggcaggctcttctccggtatgggtcccctgtccagtgcttccaccgctgcagctctc
ctccgtcagcccgcccctcctgtagagaacctctcccacgcgggcccagtccttcctgac
ccttcctcctcttcctcctccccctcatccgcagccgcagccgaccgcagggcctccagt
atcgccgcgctgcgcctcaaggccaaggaacactcggctcagcttacccagcttaacatc
ctgcctactggaaccgcagggaaggaggtgtgctga
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