Cyclopterus lumpus (lumpfish): 117749596
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Entry
117749596 CDS
T09199
Symbol
nfx1
Name
(RefSeq) transcriptional repressor NF-X1 isoform X1
KO
K12236
transcriptional repressor NF-X1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117749596 (nfx1)
04121 Ubiquitin system [BR:
clum04121
]
117749596 (nfx1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
117749596 (nfx1)
Ubiquitin system [BR:
clum04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
117749596 (nfx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
R3H
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
117749596
NCBI-ProteinID:
XP_034416125
Ensembl:
ENSCLMG00005014385
LinkDB
All DBs
Position
20:complement(5861643..5871986)
Genome browser
AA seq
1096 aa
AA seq
DB search
MAEGSSDPPDLNPDGASHQKTYQHKSRRGRSRYNNDRNLNSYDPPQQYGHFQQGFKPPFS
HSNSDYALHQHPPYQGEDGAGRRGRGRGRKEGNRGVNGYSSQRPGGDFGPYSANDRGAGG
FHSRPHPMDDGPDRPSWRREDAGRNLEQTNDDLDTGAKKNRKFNQEQRTGQPTEKVTRLK
ENNTAVDGQRSNNIKRDNSTSDIRERSQRSRTGPDSQHDDHQRKHTEVKRRQGPIKPPKL
PSQEETRSERRPSVQDDSGYGRSFQEPACNAGRGSGRYTPLQARGGSRTHHQNHRPGQRN
WDKMPESKETQTGCLIEQLSEEKYECMVCCDVIRCMSPVWSCLSCFHVFHLNCIKKWARS
PASQADESAEGWRCPACQNVALKQPTSYTCFCGKVTNPEWQRTEIPHSCGDMCGKKRSGA
DCKHPCNILCHPGPCPQCPAFITRSCICGKTSQPMRCGQGAVLRCSTVCGALLNCAKHSC
TQMCHSGACQPCQLQVQQVCYCGVTTREALCGTDKDGFDGSGHFTCQKLCGKMLNCEAHR
CQLECHRGPCQPCPRSPSLVKMCPCRQTPLTKLLELGYSERRFCSDAIPSCGKTCNQPLA
CGSSGKGGGQNTIHLCDKLCHEGSCGPCSLTSTIRCRCGSKTKEVPCVTIQKEEELVFTC
EKRCNKKRSCGRHKCGELCCVNVEHKCPLICGYKLNCGLHRCQDSCHRGNCEPCWQSSFD
ELACHCGLTVLYPPIPCGTKPPECKNMCTRRHECDHPVFHNCHSEDKCPPCTYLTQKWCM
GKHEQRSNIPCHLQDISCGLTCNKTLPCEMHRCRRICHRSECLGGGSCQQPCALPRPDCG
HPCCAPCHKGSSCPRTTCTAKVALQCECGRRKETVACTEAATSYQRYTAIAMASKLSDMQ
LGESMDIGPFLTKKELKQTRLECDQECATLERNRRLAEALEIDLSSDPFNARSTSVYSDS
LKEDARKDLKFVTEVEEEIKNLVELANKGKQPRRSHCFPPMNREHRKIIHELAEVYTVES
VSYDSEPKRNVVITAQKGKSACPNSTLTSLIERETFARAPPPIAHIKQHSSKAVSGGTWS
KMVKEEPVIDYFDVQD
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggctgagggctcctcagacccacctgacctcaatccagatggggcgtcgcatcaaaaa
acatatcagcacaaatccagacgaggcaggtccagatacaacaacgaccgaaacctgaat
agttatgatcctccgcaacaatatggacacttccaacagggctttaaacccccatttagt
cacagtaattcagattatgcattgcatcagcatcctccctaccagggcgaggatggagcc
ggacggcgagggagaggtcgagggaggaaagaaggaaatcgaggtgtaaatggctacagt
agccaaagacctggaggtgactttggcccatatagtgctaacgacagaggtgctgggggt
tttcattctaggccacatcccatggatgatggacctgatagacccagctggcgaagagaa
gatgcaggcaggaatcttgaacaaaccaatgacgacctggacactggggctaaaaaaaac
aggaaatttaaccaggagcagaggacaggacaaccaactgaaaaggttactcgcttaaaa
gaaaacaacactgcagtagatggccagaggtcaaacaacatcaaaagagacaactccact
tcagacatcagggaaagaagtcagaggagcaggacgggtccagactcccaacatgatgat
catcagaggaaacacactgaggtaaaacgacgccaagggccaattaaaccacccaagtta
ccatctcaagaggaaacgcgctcagagaggaggcctagtgtccaagatgactctggctat
ggcagatcatttcaggagcctgcctgtaatgctggacgtggctccggaagatacacaccc
cttcaggcaagaggagggagtagaacacatcatcagaaccacaggccaggccagaggaac
tgggacaagatgccagagagcaaggagacgcagacagggtgtctgattgagcagctgtct
gaggagaagtatgagtgcatggtttgctgtgacgtcatccggtgcatgtccccagtgtgg
agctgcctgagctgcttccacgtcttccacctgaactgcatcaagaagtgggctcgatcc
ccggcctctcaggcagacgaatcagctgaaggttggcgttgtccggcgtgccagaatgtt
gcactgaaacaaccgacctcctacacctgcttctgtggtaaagtgacaaacccagagtgg
cagcgcactgagattccccacagctgtggtgacatgtgtgggaagaaaagaagcggagcg
gactgcaagcacccctgtaacatcttatgtcaccctggtccttgtccacaatgtcctgcc
ttcataacaagatcctgtatctgtgggaagaccagtcagccaatgcgctgtggccagggc
gcggtgctccggtgcagcacggtgtgcggtgccttactcaactgtgctaaacacagctgc
acccagatgtgccacagtggggcatgtcaaccttgccagctgcaggttcagcaggtgtgc
tactgtggcgttaccactcgggaagccctgtgcggcacagataaagacggatttgatggt
tcaggacatttcacctgtcaaaaactatgtgggaagatgcttaactgcgaagctcaccgg
tgccagctggagtgccaccgcggcccgtgccaaccgtgcccacgctccccgagcctggtg
aagatgtgtccctgcaggcagacgccactgaccaaactcctggagctgggttactctgag
cgccgattctgctctgatgccatcccctcctgtgggaagacctgcaaccaacccctggcc
tgtggctccagcggtaagggaggcggacaaaacaccatccacctgtgtgacaagctgtgc
cacgagggcagctgtggcccctgctccctgacctccactatcagatgtagatgtggctcc
aagaccaaggaggtcccatgtgtgacgatccaaaaagaagaagagctcgtcttcacttgt
gagaagcgctgcaacaagaaacgctcctgcggccgacacaagtgcggcgagctgtgttgt
gtgaatgtggagcacaagtgccccctgatctgcggctacaagctcaactgtggcctccac
cgctgccaggattcttgtcaccgtggaaactgtgagccctgctggcagtccagttttgat
gagctggcgtgtcactgcgggctcactgtcttgtacccgccaatcccctgtggcacgaag
cccccagagtgcaaaaacatgtgcacaagaagacacgagtgcgaccacccagtgtttcac
aactgccatagtgaagacaagtgtccgccttgcacatacctcactcagaaatggtgcatg
ggaaagcacgagcaacgcagcaacatcccgtgtcatctgcaagacatttcctgtggcctg
acgtgtaataaaacgctgccgtgcgagatgcaccgctgcagacggatctgccaccggagc
gagtgtctgggggggggcagctgccagcagccgtgcgcgctgccgcgtccagactgtggc
cacccgtgctgcgctccctgtcataagggcagcagctgcccacgcaccacctgcacagcc
aaggtcgctctccaatgcgagtgcggtcgaagaaaggaaacggtggcctgcaccgaggca
gccacttcatatcagaggtacacggccatcgccatggcgagtaaactgtccgacatgcag
ctcggcgagtcgatggacatcggcccgttcctcacgaagaaggagctgaagcagaccagg
ctggaatgtgatcaagaatgcgctaccttggagagaaaccggcgtttggcggaggcgttg
gagatagacttatcctctgaccccttcaacgcccgctctacttctgtatacagcgacagc
ctcaaagaggacgccagaaaagacctgaaattcgtcaccgaggtagaagaggagatcaag
aatctcgttgagcttgctaataagggaaaacagccgaggaggagccactgtttccctccg
atgaacagagaacaccgcaagatcatccacgagctggccgaggtttacaccgtggagagc
gtgagctacgacagcgagcccaaacgcaacgtggtcatcacagcccaaaaggggaagtcg
gcctgtccaaactcaaccctgacgtccctgattgagagagagacttttgcgagggcccct
cctcccatcgctcacatcaaacagcacagcagcaaggccgtcagtggaggcacctggtcg
aagatggttaaggaagagcccgtgatagattattttgatgtccaagactaa
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integrated database retrieval system
