Cyclopterus lumpus (lumpfish): 117749615
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Entry
117749615 CDS
T09199
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117749615 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117749615 (u2surp)
Spliceosome [BR:
clum03041
]
Complex A
U2 snRNP components
U2 related factors
117749615 (u2surp)
Complex B
117749615 (u2surp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
SET_assoc
CTK3
RRM_7
Motif
Other DBs
NCBI-GeneID:
117749615
NCBI-ProteinID:
XP_034416157
Ensembl:
ENSCLMG00005009769
LinkDB
All DBs
Position
20:complement(7543791..7553785)
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AA seq
970 aa
AA seq
DB search
MADRTPGGSQKASAKALLESKLKSFSIGKMAVAKRTLSKKEQDDIKKKEDERAAAEIYEE
FLAAFEGGGEGKVKAFVRGGIANASKEEAAADEKKGKLYKPKSRFENQPKSFLPLETPAQ
FVPIDKRHSAKKNAEKEKKKSNLELFKEELKQIQEERDERHKLKGRVSRFEPLSGTDGRR
SSDGSSRRNRPSSVLDDCAPGSHDVGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASV
KIMWPRTDEERARERNCGFVAFMNRRDAERALKNLNGKMIMNFEMKLGWGKGVPIPPHPI
YIPPSMMEHTLPPPPSGLPFNAQPRERLKNPTAPMLPPPKNKEEFEKTLSQAIVKVVIPT
ERNLLSLIHRMIEFVVREGPMFEAMIMNREINNPMYRFLFENQSPAHVYYRWKIYSILQG
EAPIKWKTEDFRMFKNGSLWHPPPLNPYLHGPYDDGEEEEEDEEGIRKGSLKEDERDKLE
EMLRGMSPRRGDIAEAMLFCLGRAEAAEEIVECVAESLSILKTPLPKKIARLYLVSDVLY
NSSAKVSNASYYRKFFETKLCQIFADLNATYKSIQGHLQSENFKQRVMSCFRAWEDWAVY
PDPFLIKLQNIFLGLVNLAAEKEPPVVIVEAEPAEDIDGAPIGDYGDGTLLEDVDGVPID
AGPIDGAPIDGAPLDDLDGVPIKPMEEDIDGIPLDPSKEATFKVAPSKWEAVDEAELQAQ
AVTTSKWEAFEQPEETKKDEEDSDYDDRSPRSEDNQSYSNPIREDSDVKVKMSEMNEEKR
TKLREIEVKVMKFQDELESGKRPKKPGQSLQEQVEHYRDKLLQKEKEKEKLEREKEKEKK
EKEKAEARLKDLKKEKEKDDTPTRKERKRRHSGSPSPTRSSTRRGRSSSPRSERSERSDR
SYSKDTSSRSAHKDSPRASSKKSSKRSPSPRTPKRSRRSRSKTPKKSAKKSRSKSKSPHR
SHKKSKKSKH
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcgaacgcctggtggctctcagaaagctagcgcgaaggcgttgcttgagagc
aaattgaagtctttcagcattggcaaaatggctgtggcaaagaggaccctaagcaagaag
gaacaagatgacataaagaaaaaagaggatgagcgggcagcggcagagatttatgaggag
tttcttgctgcttttgaaggaggaggggagggcaaagtcaaggcctttgtccgcggtggt
attgcaaatgcatcaaaagaggaggccgctgcggatgagaagaaaggaaaattgtacaag
cccaagtcacgtttcgagaaccaaccaaaaagctttttgcctttggaaaccccagctcag
tttgtaccaatagacaaaagacattctgcgaagaaaaatgctgagaaggaaaagaagaag
agcaacttggagctcttcaaagaagaacttaaacaaatacaggaagaaagggatgaaaga
cacaagctgaaaggacgtgttagtcgcttcgaacctctctcgggcacggacggaagacgc
tcatcggatggttcttcaagaagaaaccgtccgtccagtgttttggatgattgtgcgccg
ggttcccatgatgttggagacccatccactaccaacttgtatctcggaaacatcaatcca
cagatgaatgaggagatgctgtgtcaagagttcggccgttatggtccgctggccagtgtg
aagatcatgtggccgagaacagacgaggagagggctcgggagaggaactgtggttttgtg
gctttcatgaacaggagggatgctgagcgagcactcaagaacctaaatggaaagatgata
atgaactttgagatgaaattaggatggggtaaaggtgtacccatcccaccccaccccatc
tacatccctccttccatgatggagcacacactcccaccacctccctctggcctacccttc
aatgcacagccccgggagaggttaaagaaccccactgctcccatgcttcctccacctaaa
aacaaggaggagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaaca
gaaaggaatttgctctctctcatccaccgaatgatcgagtttgtggtgcgtgaaggccca
atgtttgaagccatgatcatgaacagagaaatcaacaatcctatgtacaggtttctattt
gagaaccaaagcccagcacatgtatactaccggtggaagatctactccatactacagggt
gaagcaccaatcaaatggaaaacagaggactttaggatgtttaagaatggctccttgtgg
catccgccgcctcttaatccatacctccatggtccttatgatgatggtgaggaagaggag
gaagatgaggagggcatcaggaaaggcagcttgaaagaggacgagcgggacaaactagag
gagatgttgcgtggaatgagtcccaggaggggagacatagcagaagccatgttgttttgt
ctcggccgcgccgaagccgctgaagagattgtggagtgcgtcgcagagtctctctccatc
ctcaaaacccctcttcccaagaagattgcacggttatatctagtttctgacgtgctgtac
aactcatcagccaaagtatccaatgcgtcctactacagaaaattttttgagacaaagcta
tgccagatttttgctgacctcaacgcaacatacaaatccatacagggccatcttcagagt
gagaactttaagcaacgagtcatgtcgtgtttccgggcatgggaggactgggctgtgtac
ccagaccccttcctcatcaagctgcagaacatcttcctgggtctagttaatctcgctgca
gagaaggaaccccctgtcgtcattgtggaggctgagcctgcagaggacattgatggggct
ccaataggagactatggagatggaactctgctggaggatgtggatggggtgccgattgac
gcagggcccattgatggagctcctattgacggagcccccctggatgacctagatggtgtt
cctatcaagccaatggaagaagacatagatgggatacctttggatccatccaaagaggca
accttcaaggtagcaccttccaaatgggaggcggtggatgaggcagagttacaagctcaa
gctgtgacaacttcaaaatgggaagcatttgagcagccagaagaaacaaaaaaggatgag
gaggacagtgattatgatgacagaagccctcgctcagaagataatcagagctactcaaac
cccatcagagaggactcggatgttaaggtcaaaatgtctgaaatgaatgaagagaaacgc
acaaagctcagagaaatagaggttaaggtcatgaagttccaggatgagctggagtctgga
aaaaggcccaagaagcctgggcagagtcttcaggagcaggtggagcactacagggacaaa
ttactacaaaaggaaaaggaaaaagagaaacttgaacgggagaaagagaaggagaagaaa
gagaaggagaaagctgaggcccgtttgaaggatttgaagaaggaaaaagaaaaggacgac
acgccaaccaggaaagagaggaagcggcgtcacagtgggtcacccagcccaacaaggagt
agcacccgacgaggccggtcatcctcaccccgttcagaaagatcagaacgctccgaccgc
tcgtactctaaagacacatcttcccgctccgcccataaagactctccgagagccagcagc
aaaaagtcctcaaagaggtcaccttcacctcgcacacccaaacgatccaggaggtcgcgc
tccaagacgcccaagaaatcagcgaagaagtcccgctccaaatcaaagtcacctcaccgg
tctcataaaaaatcaaagaagagcaaacactga
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