Cyclopterus lumpus (lumpfish): 117749630
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Entry
117749630 CDS
T09199
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
KO
K11988
sonic hedgehog
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117749630 (shha)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117749630 (shha)
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
clum00536
]
117749630 (shha)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C46: hedgehog family
117749630 (shha)
Glycosaminoglycan binding proteins [BR:
clum00536
]
Heparan sulfate / Heparin
Morphogens
117749630 (shha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HH_signal
Hint
Peptidase_M15_3
Ribosomal_S6e
Intein_splicing
Motif
Other DBs
NCBI-GeneID:
117749630
NCBI-ProteinID:
XP_034416192
Ensembl:
ENSCLMG00005022160
UniProt:
A0A8C3GBL2
LinkDB
All DBs
Position
20:7161809..7169202
Genome browser
AA seq
415 aa
AA seq
DB search
MLLWTRIVLVGLVCLSLVASGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTEKAVGLLQTGDRVLAADDEGNPMYTDFIM
FIDQDSTTRRLFYVIETDSGHKVTLTAAHLLFVGHNATGGAQQMSAVFASQVRPGQKVFV
FESERSRLEPVTVKRIYTEEHEGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWALAPV
RFAHWVSSLLFPSQKPRVRAQNDGVHWYSKLLYQLGTWLLDSHSIHPLGMSVSSS
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgctgctctggaccagaatcgtattggttggtctcgtctgcttgtccttggtcgcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggt
agatacgaaggcaagatcacgagaaactccgagcgatttaaagagctgactcccaattat
aacacagacatcatattcaaggacgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagttgaactctctggccatctcggtgatgaatcagtggcccggggtg
aagctgcgggtcaccgagggatgggacgaagacggacaccacttcgaggagtcgctccac
tatgagggccgggccgtggacatcaccacctcggacagagacaagagcaagtacggcact
ctgtcccggctggcggtggaagccggattcgactgggtctactatgagtccaaagcccac
atccactgctcggtgaaagcagaaaactccgtggcagcaaagtccggcggctgcttcccc
ggctcctccaccgtcaccctgcaggacggcaccgagaaggcggtcggactcctccaaacc
ggagaccgggtcctggctgcagacgacgaggggaacccaatgtacaccgacttcatcatg
ttcattgaccaagactccacgaccaggaggctcttctacgtgatcgaaaccgactcgggc
cacaaagtcaccctcaccgcggcgcacctcctcttcgtgggccacaacgccacgggaggg
gcgcagcagatgtcggcggtcttcgccagccaagtccgacccggacaaaaggtgttcgtg
ttcgagtccgagcgaagtcgactcgagcccgtgaccgtaaaacggatttacacggaagag
cacgagggctcctttgcgccggtgaccgtgcaggggaccgtcgtggtggaccaggtcctc
gcgtcctgttacgcagtgatcgaagaccacgacctggcgcactgggccctggcacccgtc
aggttcgcccactgggtgtcctcgttgcttttcccttcccagaagcctcgagtccgcgca
cagaacgacggggtgcactggtactccaagctcctttatcaattaggaacatggctcctg
gacagccactcgatccatccacttgggatgtccgtgtcctcaagctga
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integrated database retrieval system