KEGG   Cyclopterus lumpus (lumpfish): 117749630
Entry
117749630         CDS       T09199                                 
Symbol
shha
Name
(RefSeq) sonic hedgehog protein A
  KO
K11988  sonic hedgehog
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    117749630 (shha)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:clum01002]
    117749630 (shha)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:clum00536]
    117749630 (shha)
Peptidases and inhibitors [BR:clum01002]
 Cysteine peptidases
  Family C46: hedgehog family
   117749630 (shha)
Glycosaminoglycan binding proteins [BR:clum00536]
 Heparan sulfate / Heparin
  Morphogens
   117749630 (shha)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Ribosomal_S6e Intein_splicing
Other DBs
NCBI-GeneID: 117749630
NCBI-ProteinID: XP_034416192
Ensembl: ENSCLMG00005022160
UniProt: A0A8C3GBL2
LinkDB
Position
20:7161809..7169202
AA seq 415 aa
MLLWTRIVLVGLVCLSLVASGMGCGPGRGYGRRRHPKKLTPLAYKQFIPNVAEKTLGASG
RYEGKITRNSERFKELTPNYNTDIIFKDEENTGADRLMTQRCKDKLNSLAISVMNQWPGV
KLRVTEGWDEDGHHFEESLHYEGRAVDITTSDRDKSKYGTLSRLAVEAGFDWVYYESKAH
IHCSVKAENSVAAKSGGCFPGSSTVTLQDGTEKAVGLLQTGDRVLAADDEGNPMYTDFIM
FIDQDSTTRRLFYVIETDSGHKVTLTAAHLLFVGHNATGGAQQMSAVFASQVRPGQKVFV
FESERSRLEPVTVKRIYTEEHEGSFAPVTVQGTVVVDQVLASCYAVIEDHDLAHWALAPV
RFAHWVSSLLFPSQKPRVRAQNDGVHWYSKLLYQLGTWLLDSHSIHPLGMSVSSS
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgctgctctggaccagaatcgtattggttggtctcgtctgcttgtccttggtcgcctct
gggatgggatgcggaccgggcaggggctacggcaggagaagacacccgaagaagctgaca
cctcttgcgtacaagcagttcatccccaacgtggcggagaagaccctcggggcaagcggt
agatacgaaggcaagatcacgagaaactccgagcgatttaaagagctgactcccaattat
aacacagacatcatattcaaggacgaggagaacaccggtgccgacaggctaatgactcag
agatgtaaagacaagttgaactctctggccatctcggtgatgaatcagtggcccggggtg
aagctgcgggtcaccgagggatgggacgaagacggacaccacttcgaggagtcgctccac
tatgagggccgggccgtggacatcaccacctcggacagagacaagagcaagtacggcact
ctgtcccggctggcggtggaagccggattcgactgggtctactatgagtccaaagcccac
atccactgctcggtgaaagcagaaaactccgtggcagcaaagtccggcggctgcttcccc
ggctcctccaccgtcaccctgcaggacggcaccgagaaggcggtcggactcctccaaacc
ggagaccgggtcctggctgcagacgacgaggggaacccaatgtacaccgacttcatcatg
ttcattgaccaagactccacgaccaggaggctcttctacgtgatcgaaaccgactcgggc
cacaaagtcaccctcaccgcggcgcacctcctcttcgtgggccacaacgccacgggaggg
gcgcagcagatgtcggcggtcttcgccagccaagtccgacccggacaaaaggtgttcgtg
ttcgagtccgagcgaagtcgactcgagcccgtgaccgtaaaacggatttacacggaagag
cacgagggctcctttgcgccggtgaccgtgcaggggaccgtcgtggtggaccaggtcctc
gcgtcctgttacgcagtgatcgaagaccacgacctggcgcactgggccctggcacccgtc
aggttcgcccactgggtgtcctcgttgcttttcccttcccagaagcctcgagtccgcgca
cagaacgacggggtgcactggtactccaagctcctttatcaattaggaacatggctcctg
gacagccactcgatccatccacttgggatgtccgtgtcctcaagctga

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