Cyclopterus lumpus (lumpfish): 117749642
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Entry
117749642 CDS
T09199
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117749642
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Others
Others
117749642
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117749642
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PDZ_6
PH
PDZ
PH_9
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
117749642
NCBI-ProteinID:
XP_034416205
Ensembl:
ENSCLMG00005022793
LinkDB
All DBs
Position
20:complement(4338812..4402351)
Genome browser
AA seq
2018 aa
AA seq
DB search
MLAQRNGLPPGCKPAPLKDRPDPRDADAEGCCSLSPSPSAGGCPWARLAGADDCLSEPYC
LWFQLLARAYWGEVELGLTSPNRSVSWARLREASRKNCVRSRAKQKDGLDQSEASAVASP
GAEEEPFSWPGPKTLHLRRTSQGFGFTLRHFIVYPPESAVHNSLKDEDNGSRGRQRNRLE
PMDTIFVKQVKEGGPAHGAGLCTGDRIVKVNGESIIGKTYSQVIALIQNSDASLELCVMP
KDEDILQLAYSQDAYLKGNDAYSGNAQNIPEPPPICYPRIEVKAAGMAQASEPAAVSETP
PGPAQGPGRRGGAVEKSYRVEIPVPPSPPPQQPSKSQTVVCVCSETVRTVAMPPDPVDRG
SRVARAGPSHRTEENRYSPSADTGSARPRPLIPSVPGGAQLQYPSSRPTESPVYSPPSSR
PGPIYPDTLSPAVRSTAASPDAFSSAISPSANHYSPSPTAPSTSPHQNIDWKNYTTYKDY
IDAKRLHTYGCRTIQERLDSLRAAANSSSAYAQQRTPTPPSSSQRGALGSQVRRRSTSND
RGVDASSKVTAATPLRSISQERLGAERTTPNRNWPRSASEDALPFSSPAGVPEPRARSCD
YLGKQPGEAGGLAVFGDRVVLEDRLLLCRGEEARASRQGTGLRASPRLNRSLTGQEGGGR
GDGLSNSAPVFTKFTTDSVLTSRADGVIMRPSRLPVKNSISDPSTALPSSRPTDPLKDQR
ANMVGNHLSPLHLQLRGRADSLKMESRSEAGLAARSSSCSGTSSKLPLQRQLQSVVVAAS
PSAPSTPNGAVTQKPKARGLSSSTSALVRTNGVEGPDATVVVLRRDKTSGPPHIRPPSYV
LAVNDNQGGGSHKPPPLVKAGSADGTMCWTSDDGFRETHLRRLGDARQKSASNDLDDSLD
SIPFIDEPSSPGTDQDSAHVPASAVISGTPVIITTVPPSPASLSPLIRRHMSHDQDSLRL
TIIESDSGKTERSKSYDEGLDNYRGEVIGRSLIPGLKSLRKAVVDRSSEDSGSRRDSSSD
VFCDATKEGLLHFKQLNTDKSKRVGGGGGMRPWKQMYGVLRGRYLCLYKDRKEGQAHANC
QAVDEPLPISIKACLIDISYSDTKRKNVLRLTTSDCEFLFQAEDREDMLAWIRVIQENSN
LDEENAAFTSHDLISRKIKEYNTLMSPTGSKTEPSPKSSRIRLLGGKGEPRASSPLTPKP
EQERKNTHKDDTSPPKDKGMWRKGLPGLMRKPFERKPSPGVTFGVRLDDCPPAHTNKFVP
LIVEVCCKLVEDRGLEYTGIYRVPGNNAAISNMQEELNNKGMNDIDIQDDKWRDLNVISS
LLKSFFRKLPEPLFTNDRYADFIDGNRTQDPVERLKVLKRLLHELPDHHYETLKFLSAHL
KTVADNSEKNKMEPRNLAIVFGPTLVRTTEDNMTHMVTHMPDQYRIVEALIQNYEWFFTD
DGTGDPVTISRQESAVESQPVPNIDHLLTNIGRTATSQGEVSDSQTSDSAKSKGSWGSGK
DRELLVSSIFAAASRKRKKSKEKPQPSSSDDDLEAAFPKKENPGQKPNHHGLQTEARSEA
RPGLNVKQPAEERKENGRAVEVKREHRNSSFLKETTSSPPTSPNPNVSVYQTEARPSLSD
PPSQLDENTSDLGTMSSGASVSRSRPKKWTGATPDLPAGACGGQAAGPGASAGAEVSSIT
SDYSTTSSITFLTGAESSALSPELQGGEEADDERSELISEGRPMETDSESDFPVFAPGGG
SSQSTPCPDSRDKAELRGGGATEGGAAAKLEARRLFPTHRMIECDTLSRRWSLRQKTDSE
SSVEGAAGSSERSEGRAESSTRLSRVLEVMKKGRSTSSLSSSSRSESERPEPAWHLKITE
RLKFKLRSSADDMFAQKSRGRKKNIRRRHTMGGQRDFAELAVINDWREQGGVDQTAELSA
LDRLKPRCSSQDFSIRDWITRERRRGSDSSAEVAPRAVPKEDQPVAPERPPSPASPVAPE
QVNGGAPQGKSNKAGLPDAHPHKLSGVHVVRSRFYQYL
NT seq
6057 nt
NT seq
+upstream
nt +downstream
nt
atgctggctcagaggaacgggctcccgccgggctgcaagccggctcccctgaaggatcgc
ccggacccgcgggacgccgacgccgaagggtgctgctccctctccccttccccgtcggcg
ggagggtgcccctgggctcggctcgccggggcggacgactgcctgtcggagccgtactgt
ctttggttccagctgttggcccgagcctactggggggaggtggagctggggctcaccagt
cccaaccgcagcgtgtcctgggctcggctcagagaagcctccaggaagaactgcgtccgg
tctcgggccaagcagaaggatgggctcgatcagagcgaggcgtcggccgtggcttctccc
ggggcggaggaggagcctttttcctggccggggcccaagacgcttcacctgcgccgaacc
tcccagggcttcggcttcacgctgcgacacttcatcgtctacccgccggagtccgccgtc
cacaactctctgaaggatgaagacaacggcagtcgagggcgacagcggaaccggctggag
ccaatggacaccattttcgtcaagcaagtgaaagagggaggccccgcccacggagctgga
ctctgtacaggggaccggatagtgaaggtgaatggagagagcatcattgggaagacctac
tcgcaagtcatagctctgatccagaacagcgatgcctcactggagctctgtgtgatgcca
aaggatgaggacattctgcagctggcgtattcccaggatgcatatctcaaaggaaatgat
gcgtacagcggaaatgcccagaacatccccgagccccctcccatatgctaccctcggata
gaagtaaaggccgcgggcatggctcaggcatcggagcccgccgcagtcagtgagaccccc
cctggcccggctcagggaccgggaagaagagggggggccgtggaaaagagctaccgggtt
gaaatccccgttccgccatctcccccgccccaacagccgtcgaagtctcagacagtggtt
tgtgtctgtagtgagactgtgaggacagtggctatgcctccggatccagttgataggggg
tcccgggtggcccgggctggaccaagccacaggacagaggaaaaccggtacagtccttca
gcagataccggctcagcgagaccgagacctcttattccctcagtacctgggggtgcacag
ttgcagtacccctcttcccgtcccacagaaagcccggtctactcccccccttcatcgaga
cccggtcctatctatcctgacacattgtctccagctgtacggtccaccgccgcctcaccg
gacgcgttctccagcgccatctcacccagcgccaaccactactcaccctctcccacggcc
ccctccacctctccacaccagaacatcgactggaaaaactacaccacctacaaggactat
atagacgccaagaggctgcacacgtatggttgccgcaccatccaggagcgcttggacagc
ttgcgtgcggctgccaattccagctctgcctacgcccagcaacgcacgccgactcctcct
agctccagtcaaaggggggcactgggctcccaggtcagacggagaagcacctcgaatgac
cgcggggtggatgcaagtagcaaggtcactgcggcgactccattacgtagcatctcccaa
gagaggcttggagcggagaggacaacaccaaacaggaactggccccggagtgcgtccgag
gacgctctgcctttctccagccccgccggagtccccgaacctcgggcgcggtcttgtgac
tacctggggaagcagcccggagaagcaggtgggttggccgtcttcggagaccgggtggtg
ttggaggacaggctgctgctgtgtcggggagaggaagccagagctagcaggcagggaacg
ggcctgagagcttcgcctcgtctgaaccggagtctcactggacaggagggaggcgggcga
ggagatggactatcaaactctgctcctgtgtttactaaattcacgacggactccgtgcta
acatcaagggccgacggtgtcataatgagaccgtcgcgcctgcctgttaaaaactccatc
tcagacccttcaactgccttaccctcctctcgacccacagaccctctcaaagaccaaaga
gccaacatggtgggcaaccacctgtcaccgctgcacctgcagctcagaggccgcgctgac
agcctgaaaatggagagcaggtcggaggccgggttggccgccaggtcctcctcttgctct
ggtacttcctctaaactgcccttgcagagacaactacaaagtgtggttgtcgctgcctct
ccctctgctccctccacccctaatggagctgtcacccaaaagccaaaagccagagggctg
tccagctccaccagcgcccttgtacggactaacggcgtagaaggaccggacgcgacagtc
gtcgtcctgagaagggacaaaacctctgggcctccccacatccgccctccgtcctacgtg
ctagccgtcaatgacaaccagggaggagggagtcacaagcccccgccattggtgaaggcg
ggctctgcagacgggacgatgtgctggacgtccgacgacggcttcagggagacgcatctg
agaaggctcggagacgcgcgtcaaaagtccgcctccaacgacttggacgactccctggat
tcaatccccttcatagatgaaccatcgagtcccggcaccgaccaggacagcgctcacgtc
ccggcctccgccgtcatatcgggaacgcccgtcatcatcaccaccgtgccgccaagcccc
gcctctctgtcccctctcatccgacgccacatgtcacatgaccaagattctctccgtctc
accattattgagtcagattctggtaaaacggagcggtccaagtcgtatgacgaaggtctg
gataactaccggggagaggtcatcgggaggtctttaataccgggcctgaagagtctgagg
aaggcggtggtggaccggtcctccgaagattcggggtccaggagggattcttcatcggac
gtcttctgcgacgccaccaaggagggactgctgcacttcaagcagctgaacacggacaag
agcaagcgcgtcggtggaggaggaggcatgcgcccgtggaagcagatgtacggcgtgttg
aggggccgctacctctgcctgtacaaagacagaaaggaagggcaggcccacgccaactgc
caggcggtggacgagccgctgcccatcagcatcaaggcgtgtctgatcgacatctcgtac
agcgacaccaagcgcaagaacgtgctgcggctgaccacgtcggactgcgagttcctgttc
caggccgaggaccgggaggacatgctggcctggatccgggtcattcaggagaacagcaac
ctggacgaggagaacgcggccttcaccagccatgacctcatcagcaggaagatcaaggag
tacaacaccttgatgagcccgacgggcagcaagacggagccgtcgcccaaatcctcccgc
atccgactgctgggagggaaaggagagcccagagcatcgagtccgctcacacccaaaccc
gagcaggagaggaagaacacgcacaaagatgacaccagcccccccaaggacaaagggatg
tggaggaagggcctcccgggcctgatgaggaaacctttcgagaggaagccgtcccccggg
gtcacgttcggagtgaggctggacgactgtcctcctgcacacaccaacaagttcgtgccc
ctgatcgtggaggtgtgttgtaagctggtggaggaccgggggttggagtacacgggcatc
taccgagtccccgggaacaacgccgccatctccaacatgcaggaggagctcaataacaag
ggcatgaacgatatcgatatccaggacgacaaatggagggacctcaacgtgatcagcagt
ctactcaagtccttcttccgtaaacttccagagccgctgttcaccaatgacaggtacgca
gattttatagacggcaacagaacacaggacccagtggagagactcaaagtgctcaagagg
ctgcttcacgagttgcccgatcatcattacgaaaccctcaagttcctctcggctcatctc
aaaaccgtggccgacaactcggagaagaacaagatggaaccgaggaacctggccatcgtg
ttcggccccactctggtgcgcaccaccgaggacaacatgacccacatggtgacccacatg
ccggaccagtacaggatcgtggaggccctcattcagaattacgagtggttcttcaccgac
gatgggaccggagatccagtgaccatctcgcggcaggagagcgcggtggagtcccagccc
gtgcccaacatcgaccacctgctcaccaacatcggccgcacggccacctcgcagggtgaa
gtatcagattcacagactagtgactcagctaaatcaaagggttcctggggctcggggaag
gaccgagagctgctagtctcctccatctttgctgccgccagccgcaaaagaaagaagtca
aaggagaagccgcagcccagcagctcagatgacgacctggaggccgcgttcccaaagaag
gaaaaccccggccagaagccgaaccaccacggcctccagaccgaggcccggagcgaggcc
cgtcccggcctcaacgtcaagcagccggcggaggagaggaaggagaacgggagggctgtg
gaggtcaagagagagcacaggaactcctcattcctgaaggagaccacgtcctcgcctccc
acctccccgaacccaaatgtctccgtctaccaaaccgaggcgagaccctctttgtcggac
cccccgtcccagctcgacgagaacacctctgacctcgggaccatgagctccggggcgtcg
gtgtccaggtcgagaccgaagaagtggaccggcgcgacccccgaccttcccgcgggagcg
tgcggcggacaggcggcgggtccgggggcgtccgccggcgcggaggtgagctccatcacc
tcggactactccaccacctcctccatcacgttcctgaccggagcggagtccagcgctctc
agtccggagctgcaaggcggggaggaggcggacgacgagcgcagcgagctcatcagcgag
ggccggcccatggagacggacagcgagagcgacttcccggtgttcgccccgggcggcggc
agcagccagtcgaccccctgcccggacagtcgggacaaggcggagctcagaggaggcgga
gcgaccgagggcggcgccgcggcgaagctggaggcgcgccgccttttcccgacgcaccgg
atgatcgagtgcgacacgctctccagaaggtggtccctcaggcagaagaccgacagcgag
tcgtcggtggagggcgccgccggcagctcggagcgcagcgagggcagagccgagtcctcc
acgcggctctcccgggtcctggaggtgatgaagaaaggccggtccacgagcagcctcagc
tcgtcctcgcgcagcgagtcggagcgtcccgagcccgcctggcacctcaagatcacggag
cggctcaagttcaagctgcgctcctccgccgacgacatgttcgcccagaagagccgcggg
aggaagaagaacatccgccgcaggcacaccatgggcgggcagagggacttcgccgagctg
gcggtcatcaacgactggcgggagcaaggcggcgtggaccagaccgccgagctgtcggct
ctggaccgcctgaagccccggtgctcctcccaggacttctccatccgggactggatcacg
agggagcggcgcaggggctccgactccagcgcggaggtcgcgccgagagccgtccccaag
gaggatcaacccgtggctcccgagagaccgccttctcccgcgtctccggtcgcgccggag
caagtcaacggcggagcgccgcaaggcaaaagcaacaaagccggcctgccggacgctcac
ccccacaaactgtccggggtgcacgtggtccgctcacggttctaccagtatctgtga
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