Cyclopterus lumpus (lumpfish): 117749731
Help
Entry
117749731 CDS
T09199
Symbol
trdmt1
Name
(RefSeq) tRNA (cytosine(38)-C(5))-methyltransferase isoform X1
KO
K15336
tRNA (cytosine38-C5)-methyltransferase [EC:
2.1.1.204
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clum03016
]
117749731 (trdmt1)
Enzymes [BR:
clum01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.204 tRNA (cytosine38-C5)-methyltransferase
117749731 (trdmt1)
Transfer RNA biogenesis [BR:
clum03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
117749731 (trdmt1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Motif
Other DBs
NCBI-GeneID:
117749731
NCBI-ProteinID:
XP_034416334
Ensembl:
ENSCLMG00005019592
UniProt:
A0A8C3AHA9
LinkDB
All DBs
Position
20:complement(20074957..20097699)
Genome browser
AA seq
376 aa
AA seq
DB search
MEGLRVLELYSGIGGMHYALKESGISAQVVAAIDINTTANQIYKHNFPDTTLWNKTIEGI
TLDVFNKLPFDMILMSPPCQPFTRIGLQGDIADPRTKSFLYILDLLPRLCRLPRFILLEN
VKGFESSSARECLVKTLMECGYTFQEIMVSPTSVGIPNSRLRYFLIAKLSTENKSTQSSK
MLDAFPEQHTASSPLPPAPCQPQEDMQGARVLYKQETTMDAQRKMSQNNDLSVRQIQDFL
EPQMEVNLEHYLLPPKTLLRYALLLDIVRPTCRRSVCFTKGYGRYVEGTGSVLQCCMETE
MENVFGGLDQFSEEEKLQQLLKLRLRYFTPRELANLMGFPQSFSFPEQISTKQQYRALGN
SLNVVVVARLLQMLVS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggagggtctgcgggtgctcgagctctacagcgggataggaggcatgcattacgcctta
aaggagagtggaatatctgcccaggtagtggctgccatcgatatcaacacaacggccaat
caaatctacaagcacaatttccccgataccaccctctggaacaagaccattgagggaata
acactagatgtcttcaataaattaccatttgacatgattttgatgagcccaccttgtcag
ccttttaccaggataggacttcagggtgacattgctgaccccagaaccaagagcttcctc
tacatcctagatcttctgccaaggctgtgcaggctgccccgcttcatcctgctggagaat
gtgaaaggcttcgagagctcctctgccagggagtgcttggtgaagacgctcatggaatgt
ggatacactttccaggagatcatggtctcacccacaagtgttgggatcccaaattcaaga
ctgcgttatttcctgattgctaagctttcaacagaaaacaaaagcacccagagttcaaag
atgttggatgccttccctgagcagcacacagcctccagtcctctccctccagctccctgc
cagccacaagaggacatgcagggggctcgtgtcctctataaacaagagacaacaatggat
gcccagaggaagatgagtcagaacaacgacctgtctgtcaggcagatccaagacttcctg
gaaccgcagatggaagtaaaccttgaacactatcttcttcctcccaaaacactgctgcga
tatgctctgctgctggacattgttcggcccacatgcaggaggtctgtgtgctttactaaa
ggctatggccggtatgtggagggaactggctcagtactgcagtgctgcatggaaacagag
atggagaacgtgtttggaggtctggaccagttctctgaagaggagaaactccagcagctg
ctgaagctcaggttgcgttattttacgcccagagaacttgccaacctcatgggcttccct
caaagcttctcctttccggagcagattagcaccaagcagcagtacagagctctggggaac
agcctcaacgtggtggtggtggccagactcctccagatgctggtgtcctag
DBGET
integrated database retrieval system
