Cyclopterus lumpus (lumpfish): 117749771
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Entry
117749771 CDS
T09199
Name
(RefSeq) piezo-type mechanosensitive ion channel component 2-like
KO
K22128
piezo-type mechanosensitive ion channel component 1/2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117749771
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117749771
Membrane trafficking [BR:
clum04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
117749771
Ion channels [BR:
clum04040
]
Other channels
Mechanosensitive channel (Piezo)
117749771
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piezo_TM1-24
Piezo_TM25-28
Piezo_THU9_anchor
Piezo_cap
THU_Piezo1
FAM210A-B_dom
Motif
Other DBs
NCBI-GeneID:
117749771
NCBI-ProteinID:
XP_034416405
Ensembl:
ENSCLMG00005007002
LinkDB
All DBs
Position
20:complement(615025..673574)
Genome browser
AA seq
2848 aa
AA seq
DB search
MPSELAVGLVFRVLLPLILTAACVLRFNGFSLVYVLLMLLLPLLPEPSTSSGRCVTAVCV
SSFLFLLLQSFFQLTSASLQPESNCTSWQKTLAQVGLVSLTGSDAGSAVRQVFPDVGVLV
VGLLTWRLIGRLNANTHTQPQQEEETQEELVFEEDSVLGLEEEEEDEDEEDEEDEEEEGN
RNRVLVELEILMCKTRKMMGNMTTTGGKVLVTVLLGLTGIMFPSLSSLPYLLCFQVLCTW
WALSGQVPPLLFRCVSVMSLLYSSSHFLLLYCYQLPSLQEVWPPNCISASAFGLLPLVSV
DCSALWRLQVNSELSWFHFCSPLMLLLLYNTVATLWRNQLIDGIGWWGVERAESAISVSC
DIITATSNLSDEVSSDITAERRRELWRRAHDQCRDVSSTNDSHSDSFAPPTQSTALGLDI
SSMPHYSLSQSDTLETCVFEGDGWEEEEEEEEKRRREEEEEERRRRREEEEGVSAASMAF
SFLLKQSYLCALMAMMAWPITYVSWLTCVLLLWSCVLWMMRERRRYTLMSSPWLVAYGNL
LVIMQYVYSFPSIQEVPGLFPRKDDPCRELASKLLCLMTFWLLLRQALTEKRDRQADRQA
DTQLSNITVHMEEEQQEEKEVPYEEVLLLQTEGGGIKMEALGAVVTRMFVKYWIYVCGTM
FFFVSFEGKIVLYKVIYMVMFLCCVALYQLNYERWRAMLRGFWVAVVVYSMSVLILVYTF
QFPSSLHTWSYYTGLSTHRLEDVGLEKFSVPVLFTRIFIPAAFLLVCIVHLHYFHKPFLQ
LTDLKTVVDTHNSTITRLVHSDGSLFDLSLCGAPQLLLEAAKSRGQRERETETKEKWKEE
EEEEEEYPCVFERETLSDHIKVLVSWRLVVDRLSVLFLRLLLSLQRLQHLLWWLLELHIV
KIVSSYIIWISVKEVCVFNLLFVLCVGVALPCRAWRPLLSGVCTVWTCVVTVCKMLYQLK
IVQPVRYASNCTMPGNSSTYLSRSILYSGPVDPAQWVGLRKTDGKLLDYLRYNLMMLALL
AFEVTVYRHQELYRLRRNEVPPPTRTLFHDITRCHLDSSVLSCIKYFLNYFFYKFGLETC
FLLAVNVIGQRMDLFAVGHAFGLISVLSKRGRKHIASVWPKYCYFLSGLLCFQYLLCIGF
PPAACKDYPWRPPSFNMDSNVVKWLFLPDHLTPPNPIFLLYDFLLLLGASLQLQVFEEEH
QSSVQTLAGDNCELEEDDGQVSDPIRRLRLNTGPDFMLCRSYLDMMKLIIFSYMFWFVLT
IIFITGTTRISIFCMGYLVACFYFLLVGGDLLLKPVKSILVYWDCLIGYNVFVITMKNIL
SILACGFIKSLVSNHCWLIQLFSLACTIKGYTKPKQQSSKQCELPSDEAGIIWDGVCFCF
LLLQRRVFRSHYFLCVVLNLQNTQLLASRGAELFEASTVKAVRARLEVEKTSMDLLKRQM
ERIKSRQKKFRRGKEKMLSLTQDSFHTDDQENRKGRSQKKWWRPWVNHASMVRSGDYYLF
ETDSEEEEEEEEKKKEEEKEEEQPDKSAFQFVYHAWITDSRTAMRARNNHEKLWKKNSSD
RTSRTEEKRGGIEVMEDTEDGEEEEEEEEKEEGPDTVLRRFSSTLRFCWVLLSALLDSLT
AWLRGLCQEHIDISTVLRIERCMLTQQAKQGNVPTREAIHVYYQEQMMKASRESGLNYST
QDAERQVLAERGREEEEEAVIHDPDEEPDEEPENNPEKPEPISGGDVLGEPEPEPKSGAD
GSGEPEPEPTSGADSSGEPEADPVSGVDGSGEPEPEPKSGADGSGEPEAEPVSGVDGPGE
PGAETKSGVDGLGEPEPVSGVDVPGEPEAEPVSGVDGLGEPGAEPVSGVDGPGEPGAEPV
SGVDGPGEPGAEPVSGADGPDEPVPSEAPSSGVEPERVTAEGDSAVEDYPEDLLTKNSQR
WRPKLTRMERVPSPSSSSSSEEEPTRAEESKPTPDSLLPPSYSLALGLDLQDKEEEGGGA
FRRRPAQTPEERSDFLSDSTSTSCLAASGAQELTASELLRSRTFYDAELEASDRFYGNQH
QLLQMCYALYNILAARSETVCYLVIVLNHMVSASCLTLVLPVLVFLWATLSVPRPSKTFW
MTAIIYTEVTIVIKYFFQFGFFPFNQKLEVDRSKPFHPPNILGVEKKEGYVLYDLLQLLA
LFYHRAILKCHGLWDQTITTENDAVHHDIEAASLDLTELTGTMRRRGRRTTSSCTQLRSP
AVSAGSGISRAQQPGRLALLLEKLRELSIRAKKSSVSRCMSLYHPVLHFFRALVQPEYSA
VTDVYVLMFLADTVDFIIIVFGFWAFGKHSAAADITSSLSEDQVPEAFLVMVLIQFGTMV
IDRALYLRKTVLGKLVFQVILVFGIHFWMFFILPTVTERRFNQNLVAQLWYFVKCVYFGL
SAYQIRSGYPTRVLGNFLTKSYNYLNLFLFQGFRLVPFLTELRAVMDWVWTDTTLSLSSW
ICVEDVYAHCFVLKCWRESEMRYPQPRGQKKKRVVKYGMGGLIVLLLICIVWFPLLFMSL
IKSVAGVVNRPIDVSLTITLGGFQPIFTMSAQQNQLRDVTEEDLESFTSSYSYTPSALQF
LEAYGHEDVTVAELQGSSNSLWTISPPSRQYLSQVLSLDHFPLTVSWTVQRNLSLGAKAE
LASGKHVAYLDDQTRLELIQLLNGTRSLPVVIHKVFPCFIRAPSDSNSKPIEQLYSDNGY
KDILLALERSTNQSREIQDWWIVDQPAANLVPIGGVTSLSDKREAGLQLFVFSDKVSPPS
LGFLAGYGIMGLYASVVLVIGKFVREFFSGISHSIMFEELPCVDRILKLCTDVFLVRETG
ELELEEELYAKLIFLYRSPETLIKWTRR
NT seq
8547 nt
NT seq
+upstream
nt +downstream
nt
atgccctcagagctggctgtagggctggtgttcagggttctgctgcccctcatcttgact
gcagcttgtgtgttgaggtttaatggattctctctggtgtacgtgctcctgatgctgttg
ctgccactcctgccagaaccgtccacgtcatcaggtcgctgtgtgacggccgtctgcgtc
tccagcttcctcttcctgttgctgcagtccttcttccagctgaccagcgcctccctgcag
ccagagtccaactgtacgtcgtggcagaagactctcgctcaggtcggcctggtgagtctg
acaggaagtgatgccggctcggcagtgagacaggtgtttccagatgttggcgtgctggtt
gttggtctgctgacctggaggttgattggaagactgaacgcaaacacacacacgcagcct
cagcaggaggaggagacgcaggaggagctggtgtttgaggaggactctgtgctcggactg
gaggaggaggaggaggacgaggacgaggaggacgaggaggacgaggaggaggaaggcaac
agaaacagggttctggttgaactggaaatactgatgtgtaaaaccaggaagatgatggga
aacatgacaacgactggaggaaaagtcctggtgacggtcctactgggactcacaggtatc
atgtttccctctctctcctccctcccctaccttctctgtttccaggtgttgtgtacctgg
tgggcgttgtcaggtcaagtcccgcccctcctcttcaggtgtgtgtctgtgatgtcactg
ctctactcctcatctcatttcctgctcctctactgttaccagctgccctccctgcaggag
gtgtggcctcccaactgcatctccgccagtgcgttcggcctgctgccgctggtctccgtg
gactgttctgccctctggaggctgcaggtgaactctgagctcagctggtttcacttctgc
agtcctctgatgctgctgctgctctacaacacggtggccactctgtggaggaaccagctg
atcgacggcatagggtggtggggcgtagagagggcggagtcggcgatcagcgtgagctgt
gacatcatcaccgccaccagcaacctcagcgatgaggtcagcagtgacatcacagcagag
agacgcagagagctttggaggagagctcacgaccagtgcagagacgtgtcatccaccaat
gacagtcactccgactcttttgccccgcccacccagagcacagcccttggattggacatt
tcctccatgccgcactattctctgagccaatcggacacgttggagacatgtgtgtttgaa
ggagacggatgggaggaagaggaggaagaggaggagaagaggaggagggaggaggaggaa
gaggagagaagaaggaggagggaggaggaggagggagtcagtgccgcctccatggcgttc
agcttcctcctgaagcagagctacctctgtgctttgatggccatgatggcgtggcccatc
acatacgtgtcctggctgacgtgcgtgctgctgctgtggtcgtgcgtcctctggatgatg
cgcgagcgccgccggtacacgctgatgtcatcgccctggctggtcgcctacggcaacttg
ctggtcatcatgcagtacgtctatagcttcccctccatccaggaagtccctggcctgttc
cccagaaaagatgacccctgcagggaactggcctccaagttgctgtgtctgatgaccttc
tggctgctgctgcgtcaggcgctaacggagaagagagacagacaggcagacagacaggca
gacacacagctgtctaacatcactgtccacatggaggaggagcagcaagaggagaaggag
gtgccctatgaggaggtgctgctcctgcaaacagaagggggaggaattaagatggaggct
cttggtgccgtggttaccaggatgttcgttaaatactggatctacgtctgtggaacgatg
ttcttcttcgttagttttgaaggaaaaatcgtcctctacaaagtcatctacatggttatg
ttcctctgctgcgtcgccctctaccagttgaactacgagcgttggcgtgccatgctcagg
ggtttctgggtagcagtggtagtttactccatgtcggttctcatcctggtctacaccttt
cagttcccctcgtcactccatacctggagctactacactggattaagtacacacaggttg
gaggatgttggtttggagaagttctcagttcctgttctcttcaccaggatcttcatccct
gctgcgttccttttggtgtgcattgtacacctgcattacttccacaagccattcctgcag
ctgaccgacctgaagactgtggtggacacacacaacagcaccatcaccaggttggtccac
tctgacggcagcctgttcgacctgtcgctgtgtggagctcctcagctcctcctggaggcc
gctaagagcagaggacaaagggagagagagacggagacaaaagagaaatggaaggaggag
gaggaggaggaggaggagtacccttgtgtgtttgagagggaaaccctgtctgaccacatt
aaagtgctggtctcctggaggttggtggtggatcgtctctctgttttgttcctgcgccta
ctcctctccttgcagcgcctgcagcacctcctctggtggctcctggaactccacatagtc
aagatcgtatcctcctacatcatctggatctctgtgaaggaggtgtgtgtgtttaacctg
ctgttcgtactgtgtgtgggcgtggctctgccctgcagggcgtggcgccccctgctgtca
ggagtctgcacagtttggacctgtgtggtgaccgtctgcaagatgttgtaccaactcaaa
atcgtccagcccgtcagatacgcctccaactgcaccatgccaggtaactccagtacctac
ctgtctcgctctattttgtactctggtccagttgaccccgcccagtgggtggggcttcgg
aagacggatggaaaacttcttgactacctgaggtataacctgatgatgttagcgctgtta
gccttcgaggtgacggtctacagacaccaggagctctaccgtctccgccgcaacgaagtc
ccgccccctaccagaacgctatttcatgacatcaccaggtgtcacctggacagcagcgtg
ctaagctgcattaagtacttcctcaactacttcttctacaagttcggtctggagacctgc
ttcctgttggctgtgaacgtgattggtcagcggatggatctgttcgctgtaggccacgcc
tttggtctcataagcgttctatcaaagcgtggcaggaagcacattgcctcagtgtggccc
aagtactgctacttcctgtcggggctgttgtgtttccagtatcttctgtgcatcgggttc
cctccggccgcttgtaaagattatccctggagacctccatccttcaacatggactccaac
gtggtgaagtggctcttcctccctgatcacctgacaccaccgaacccaatattcctcctc
tatgacttcctgctcctcctcggggcctctctgcagctgcaggtgtttgaggaggagcac
cagtcatcggttcagaccctcgcgggagacaactgtgagctggaagaggatgacggacag
gtctccgatccaattaggcgactccgtctcaacacaggcccggacttcatgctgtgcagg
tcttaccttgacatgatgaagctgatcatcttcagctacatgttctggttcgtcctcacc
atcatcttcatcactgggacgaccaggatcagtatcttctgtatgggttacctggtggct
tgtttctacttcctattggtgggcggagacttgctgctgaaaccagtcaaatccatcctg
gtgtattgggattgtctgattggctacaacgtgtttgtcatcaccatgaagaacattttg
tcgatcctagcctgtggtttcatcaagtcgttggtgtcgaatcactgttggctcattcag
ctctttagtctggcctgcaccatcaaaggatacaccaaaccgaagcagcagagcagtaag
cagtgtgagttgccgagtgacgaggcgggcatcatctgggacggagtctgtttctgtttc
ctgttgcttcagaggagagtcttcaggagtcactacttcctttgtgttgtcctaaacctt
caaaatacacaactactggcctccaggggggcggagctctttgaggcgtccacagtgaaa
gctgtcagagcaagactcgaagtggagaagacatccatggaccttctgaagagacagatg
gagagaatcaaatcccgacagaagaagtttcgcagaggaaaagagaaaatgttgagtttg
acccaagacagcttccataccgacgatcaggagaacaggaagggccggagccagaagaag
tggtggagaccctgggtaaaccacgcctccatggtacgaagcggcgactactacctgttt
gagacggacagcgaggaagaggaggaggaggaggagaagaagaaagaggaagagaaggag
gaggagcaacctgataaatcagccttccagtttgtgtatcacgcctggataactgactcc
agaacagcgatgagagctcgcaacaaccatgagaaactctggaagaagaactcctctgat
cgaacgagcaggacggaggagaagagaggaggaatagaagtgatggaggacacggaggac
ggagaggaggaagaggaggaggaggagaaagaggagggaccagacacggtgctgcgtcgg
ttctccagcacgttgcggttctgctgggttctgctgtcggctctgctggactctctgact
gcctggctccgcggtctgtgtcaggagcacattgacatctccactgtcctccgcatcgag
cgctgcatgctaacgcagcaggccaagcagggtaatgttcccactagagaggcaatccac
gtttattaccaagaacagatgatgaaagcctccagagagtcaggcctgaactacagtacc
caggacgccgagcggcaggtcttagcagagagaggaagggaggaggaagaagaggccgtg
attcatgatcctgacgaagagccagatgaggaaccagagaacaatccagaaaaaccagaa
ccaatatctggaggagatgttctaggtgaaccagaaccagaaccaaaatctggagcagat
ggttcaggtgaaccagaaccagaaccaacatctggagcagatagttcaggtgaaccagaa
gcagacccagtatctggggtagatggttcaggtgaaccagaaccagaaccaaaatctgga
gcagatggttcaggtgaaccagaagcagaaccagtatctggagtagatggtccaggtgaa
ccaggagcagaaacaaaatctggagtagatggtctaggtgaaccagaaccagtatctgga
gtagatgttccaggtgaaccagaagcagaaccagtatctggagtagatggtctgggtgaa
ccaggagcagaaccagtatctggggtagatggtccaggtgaaccaggagcagaaccagta
tctggggtagatggtccaggtgaaccaggagcagaaccagtatccggagcagatggccca
gatgaaccagttccatcggaggctccatcctcaggagtcgaaccagagagagtaacagca
gaaggtgactcagcagtggaagattacccagaagacctgctgactaaaaacagtcaaaga
tggcgacccaaactgaccaggatggagcgagtcccgtctccatcgtcctcctcgtcttca
gaggaagaaccgacgagagctgaagaatcaaagccgactcccgactccctcctccccccc
tcctacagcctcgctctggggctggacctgcaggacaaggaggaggaaggtgggggggca
ttcaggaggcggccggctcagactccggaggagcggagtgacttcctgtccgactcgacc
tccacttcttgtctggcagcgtctggcgctcaggagctgacggccagcgagctgctgagg
agcaggactttctacgacgcggagctggaggcatcggaccgcttctacgggaatcaacac
cagcttctccagatgtgctatgccctctacaacatcctggcggccaggtcggagacggtg
tgttacctggtcatcgtgctgaaccacatggtgtctgccagctgtctgacgttggtactt
cctgttctggtgttcttgtgggcgacgctgtccgtccctcgacccagcaagacgttctgg
atgaccgccatcatctacactgaggtcaccatcgtcatcaagtatttcttccagtttggt
ttctttccattcaaccagaagctggaggtggatcggtccaaaccgttccaccctccaaac
atcctgggagtggagaagaaggaaggctacgttctgtatgacctcctgcagctgctcgct
ttgttctaccacagagccatactcaagtgccacggattgtgggaccagactattaccacg
gagaatgacgccgtccaccacgacattgaggccgcctccctcgatctcaccgagctcacc
ggcaccatgcggcgtcgaggcaggaggacgacctccagctgcacccagctgcgctctcct
gcagtgtctgcaggcagcgggatttccagagctcagcagcccggaaggttggctctgctg
ctggagaaactcagagagctttccatcagagccaagaagtcctccgtaagcaggtgtatg
tctctctaccatcccgtccttcacttcttcagagctctcgtccaaccagaatacagcgcc
gtcactgatgtttacgtcctcatgttccttgccgacaccgtcgacttcatcatcatcgtc
ttcggcttctgggcctttggaaaacactctgcggctgctgacatcacttcctctctctca
gaagaccaagttcctgaagctttcctggtgatggttctgatccagtttggtaccatggtg
atagacagggctctgtatttgaggaagaccgttctggggaagttggtcttccaggtgatt
ttggtttttgggattcacttctggatgttcttcatcctgccgacagtcactgagaggcgg
ttcaaccagaacctggtggctcagctctggtattttgtgaagtgtgtgtactttggactg
tcggcctatcagattcgatctggataccctacaagagttctgggaaacttcctgaccaag
agctacaactacctgaacctcttcctgttccagggtttccgtctggtccccttcctgacg
gagctgagggcggtgatggactgggtgtggacagacaccacgctgtctctgtcctcctgg
atctgtgtggaggacgtttacgcccactgctttgtcttaaagtgctggagggagtctgag
atgaggtaccctcagcctcgcgggcagaagaagaagcgtgttgtgaagtacgggatgggc
ggtctgatcgtgctgctgctgatctgcatcgtttggtttccgctactcttcatgtcgctc
atcaagtctgtcgccggagtcgtcaaccgaccgattgatgtttccctgaccatcacactg
ggaggcttccagcccatcttcacgatgagtgcacagcagaaccagctgagagacgtgact
gaggaagacttggagtccttcaccagctcctacagctacacacctagtgccttgcagttc
ctggaggcgtatggtcatgaggacgtaacggtggcagagcttcagggcagcagcaactct
ctgtggaccattagccctcccagcaggcagtacctgagccaggtgctcagtctggaccac
ttccccctgactgtgtcctggactgttcagaggaacctgagtctgggggcgaaggcggag
cttgcgtcaggtaaacatgtggcctatctggacgaccagacccgcctggagctgatccag
ctgctgaacgggacgaggtcacttcctgttgtcatacacaaagtgtttccatgtttcatt
cgagctcccagcgactccaactccaaacccatcgaacagctttactcagacaacggctac
aaggacatcctgctggccctggagcggtcgaccaatcagagccgagagatccaggactgg
tggatcgttgaccaaccagctgccaacctggtgcccattggaggcgtaacttcgctgagt
gacaagagggaggcggggcttcagctgtttgttttcagtgataaagtcagtcctccgagt
ctgggcttcctggctggatacggcatcatgggtctttatgcgtcggtggttctggtgatc
gggaagtttgtgcgtgagttcttcagtgggatcagtcactccatcatgttcgaggagctg
ccgtgtgtcgaccgcattctcaaactctgcaccgacgtcttcctggtgagagagacaggt
gagctggagttggaggaggagctttacgccaaactgatcttcttgtatcgatcgccggag
acgctgatcaaatggacccgacgctga
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integrated database retrieval system
