Cyclopterus lumpus (lumpfish): 117749867
Help
Entry
117749867 CDS
T09199
Symbol
pdx1
Name
(RefSeq) pancreas/duodenum homeobox protein 1
KO
K07594
insulin promoter factor 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117749867 (pdx1)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
117749867 (pdx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Homeodomain
Motif
Other DBs
NCBI-GeneID:
117749867
NCBI-ProteinID:
XP_034416574
Ensembl:
ENSCLMG00005021810
LinkDB
All DBs
Position
20
Genome browser
AA seq
264 aa
AA seq
DB search
MQVRYMCGSSEAMNREDHYYPSQVFKDSCAYQRSQGDDYSHSPPPCLYMSRQVHAVYTPS
AMGALEQASLPDIAPSYSLPMREDPGVPQLHHPQGLQQQPLPPAAGYGDTGEQGRYHLPF
PWMKTTKSHSHTWKGQWSGPYVMAESEENKRTRTAYTRAQLLELEKEFLFNRYISRPRRV
ELALTLSLTERHIKIWFQNRRMKWKKEEDRRKVRGSDPDQDSSITSGDQGEAAGGVTSTN
GPHTTSPPVSPLHSLSAPATGEPA
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtacggtacatgtgcgggtcctcggaagccatgaatcgggaagatcattattat
ccttctcaggtttttaaagactcctgtgcctaccagagatcacagggggacgactacagc
cacagcccgccgccctgcctctacatgagcaggcaggtccacgctgtctacacaccgtca
gccatgggagccttggagcaggccagccttcctgacattgccccctcttacagtctaccc
atgcgggaggatccaggtgtgcctcagctccaccatccccaggggctccagcagcagcct
ctcccacctgctgcaggctatggagacacgggggaacaaggcagatatcacctccctttc
ccctggatgaaaaccacaaaatctcactcgcacacctggaagggacagtggtcaggacca
tacgtgatggcggagtctgaggaaaacaaacgcacgaggaccgcgtacacgcgcgcccag
ctgcttgagctggagaaggagttcctgttcaaccgctacatctcgaggccgcgccgcgtg
gagctggcgctgaccctgagcctcacggagcgccacatcaagatctggttccagaaccgg
cgcatgaagtggaagaaggaggaagaccgaaggaaggtgagggggtccgacccggatcag
gactcatctatcacctctggagaccagggggaggccgcgggaggggtcacctctacgaac
ggacctcacaccacttcaccccccgtttccccgctgcactccctctccgcacctgcgacc
ggagagcccgcatag
DBGET
integrated database retrieval system
