Cyclopterus lumpus (lumpfish): 117749896
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Entry
117749896 CDS
T09199
Symbol
gli3
Name
(RefSeq) transcriptional activator GLI3
KO
K06230
zinc finger protein GLI3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
117749896 (gli3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117749896 (gli3)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
117749896 (gli3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-H2C2_2
zf-C2H2
FOXP-CC
zf-C2H2_4
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
117749896
NCBI-ProteinID:
XP_034416607
Ensembl:
ENSCLMG00005009375
LinkDB
All DBs
Position
20:complement(5483194..5531408)
Genome browser
AA seq
1615 aa
AA seq
DB search
MPTRLPFLPVSGFFPDAGALMWLSVSGQLPATGAAAALLGHWAPADRWEPTRSAVQSVGL
SEERWSLLWCVAAVGKVKTVARAPASCAPCSCILYWRDEKKNLNIQKSKGNLVPGVNTAP
QFFPTFHPPVPIDDRHTQGRYIYEPSPVPPLHVPPGLAGSPAFSDISLIRISPQRNPSVG
AESPFHPPHPYINPYMDYIRSLHSSPSISVLSATRGLSPADAPHTGLTTAEYYHQMALLA
GHRSPYATDLLPSVASTAGVSSATALHMEYLQAMENSRFSSPRLPSRPSRKRPLPISPLS
EHSFDLQTMIRNSPNSLVTMLNNSRSSSSTSGSYGHLSAGAISPALSFAYPPTPVALHVH
QQLIGRQPGLVGSAFGHSPPLIHPSPAYATQRSVPGIPPSGLSASERSALSNDSSQTKPT
SESAVSSTGDPMHHKRSKIKPEEELPSPGAVSVQDHPDGMTLVKEEGDKDESKQEPEVVY
ETNCHWENCCREFDTQEQLVQHINNDHIHGEKKEFVCRWEECSREQKPFKAQYMLVVHMR
RHTGEKPHKCTFEGCAKAYSRLENLKTHLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQN
RTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDYPRPPPQREHGGN
GQGRSPGQLPLGGYTDQREYNHATSKQDECLQVKSIKTEKPMTSQPSPGGQSTCSSDQSP
VSTYPCSGVQLAVSAGRSPGEGLEEDEEQEDIEEEVEEECVGVRAPIMDSTVSTATAAML
TLQARRSVGRPLRWMEHIKMERLKQVNGVLPRLGPLSPTPPPKGSTLPNILGKGSYLGRQ
WGVSAPQPPAHAELSSTELTVLNLLRDRRDSSGSATSSAYLSSSRRSSGISPCFSSRRSS
QGSQNEGTMTAGHHRRLHNLSSTDSYDPISTDASRRSSEASHYGGGTAGILSGGGCGGAG
GVVGSRGMLTLTPAQHYHLKAKYAAATGGPPPTPLPNMERMSLKTRMAMMDEGGSNHSLP
PLVRPHCCGDGTNGYTNGYVGHAGYRRRVLYPGEGPLNGNRRASDPVRTQARDISSLPPV
QRFNSLNNLHPLPPLTHLSTPETRSFSLQNYTRSEGNLQRGLQHSPYTPSIAEHAALEAL
AMEDEAGLLLEDEDMLPDDLVQYLHSQVQLNGGSYMHIEDQIASSQRDTSHPSMEEMEQI
QTSGLNMGFAGSHGLQPPQTEERTSPSKLPIQWNEVSSGSADRSPERELNHQTQCGRWSA
AEHGPVAAPFGRFGNMVVQQQVPVDFQNSCAQVNQPQSACCVNPAVKLETPPNSCMEMRG
SISTNPFGRPNFSQIVNGPPQQGFKQQASNGPPKQSHFQQNHNSSTSCQIGNNLILSRAS
MDVLPGLSQGTALHHNRQVHVPRPPDGYRNSVRTQQYLNPETSGEIQAGLNQQQQLQRSG
DHCSLARQVSGLKLEAPDHGYLEQGFGDCLPYDPLDRKASSFPVLEDQCLLNSMAESVGQ
AVGSVGGSSAALLSPGRDQVTSTMDGNVPGILDEGVSLDFGAMLEDGYDQGSLVSGVLSP
SIFQGLSRTSSRLTTPRASAAFHSVAPGVNNMAIGDMSSLLTTLAEESKFLAIIQ
NT seq
4848 nt
NT seq
+upstream
nt +downstream
nt
atgcccacccgcctccccttcctccccgtctccgggttctttccagacgccggcgctttg
atgtggctcagcgtgagcgggcagctgccggccacgggggctgcagcagcgctgctgggc
cactgggccccggcggaccgctgggagccgactcggagcgcggttcaatcagtggggctc
tccgaggaacgctggagcttgctgtggtgtgtggccgcggtggggaaggtaaagaccgtg
gcacgtgcgccggcttcctgtgcgccctgcagctgtattctgtattggagagatgagaaa
aaaaacctgaatatccagaagagcaagggcaatttagttcccggagtaaacacagcgccg
cagttcttccccaccttccatcctcctgtgccaatcgacgacagacatacccagggacgt
tacatctacgagccttcccccgtgccccctcttcatgtgcctcccgggttggcgggcagt
ccggctttctccgacatctccctcatccggatctcgccccagaggaacccctctgtgggg
gcggagtcgccctttcaccctccgcacccttacatcaacccgtacatggactacatccgc
tcgctccacagcagcccctccatctccgttctgtcggccacccggggcctcagccccgca
gatgcccctcacacaggtctgaccacagccgagtactaccaccagatggctctgctggcg
ggccaccggagcccgtacgccaccgacctgctcccgtccgtggcgtccacggccggcgtg
agcagcgccaccgccctgcacatggaatacctgcaggcgatggaaaactcccgtttctcg
agccccaggctgccatcgaggcccagcaggaagcgcccgctgcccatctcgcccctctcc
gagcacagcttcgacctgcagaccatgatccgaaactcgcccaactccctggtcaccatg
ctcaacaactctcgctccagctcctccaccagcggctcctacggccacctctctgctgga
gccatcagcccggcgttaagcttcgcctaccctccgaccccggtggctttgcacgtgcac
cagcagctgattggccgtcaaccgggcctcgtgggctctgcctttggccacagcccgccg
ctcatccacccgtcgccggcctacgccacccagaggtccgtgcctggcatccccccctct
gggctcagcgccagcgagcgctcagccctctccaacgactcctcacagaccaaaccgacg
agtgaatctgcagtgagcagcacgggcgacccgatgcaccacaaacgctccaaaattaaa
cccgaggaggagttgccgagcccgggcgccgtgagcgtgcaggaccatccggatgggatg
accctggtgaaagaggaaggggacaaggatgagagcaaacaggagcctgaggtggtgtac
gagacaaactgccactgggagaactgttgccgcgagttcgacacgcaggagcagctcgta
cagcacatcaacaatgaccacatccacggggagaagaaggagtttgtgtgtcggtgggag
gaatgttcccgagagcagaagcccttcaaggcccaatacatgctggtggtccacatgcgc
agacacacgggggaaaagccccacaagtgcacatttgagggctgcgccaaggcctactcc
cgtctggagaacctgaagactcacttacgctcgcacaccggcgagaaaccgtacgtgtgc
gagcacgaaggctgcaacaaggccttctccaacgcctcggaccgggccaaacatcagaat
cgcacgcactcaaacgagaaaccgtatgtgtgtaaaatcccgggctgcaccaaacgctac
acggatcccagctccttgcgcaagcacgtgaagacggtgcacgggccggaggcgcacgtc
accaagaaacagcgcggggattacccgcgtcctccgccccaacgggagcacgggggcaac
ggccagggccggtcgccagggcaactgcctctgggtgggtacacggaccaaagggagtac
aaccatgctacctcaaaacaggatgaatgtctgcaggtcaagtccatcaagacagagaag
cctatgacgtctcagccaagccctggcggtcagtctacatgcagcagtgaccagtccccc
gtcagcacctatccctgcagtggagtccagcttgctgtgagcgccggacgctcgccaggg
gaggggctggaggaggacgaggagcaagaggacatcgaagaggaggtggaggaggagtgc
gtgggtgtgcgggcccccatcatggactccacggtctccacggcgaccgcggccatgctg
accctgcaggcgaggcggagcgtcggccgccccctgcgctggatggagcacatcaagatg
gagaggctgaagcaggtgaacggagtgctgcccaggctggggcccctgtcccctacaccg
cccccgaaaggttccacactacccaacatcctggggaagggatcctatctgggcaggcag
tggggggtgtctgctcctcagccacctgctcacgctgagctgagcagcacagagctaacg
gtgctcaatttgctccgtgaccggcgcgacagcagcggcagcgccaccagttcagcctac
ctgagcagcagtcggcgctcctccggcatctccccctgcttctccagtcggcgctccagc
cagggttcccagaacgagggcacgatgacggccggccaccaccgccgcctccacaacctc
agctccaccgactcttacgaccccatctccaccgatgcctcgcgccggtccagcgaggca
agccattacggaggtgggacagcagggatactctcaggcgggggctgcggaggtgcggga
ggagtagtggggtcacgggggatgctcactttaaccccagcgcagcactaccacctgaaa
gccaagtacgccgccgcaactggcggcccacctcccacgcctcttcccaacatggagcgc
atgagcttgaagactcgcatggccatgatggatgagggtgggagcaaccactctttgccg
cctctagtcaggccacattgctgcggtgacggcaccaacgggtacaccaacgggtacgtg
ggacatgcaggttacaggaggagggtcctgtatcccggcgagggaccactgaatgggaac
cgcagggccagtgacccggtgcggacgcaggctcgtgatattagcagcctgcccccggtg
caacgcttcaacagccttaacaacctccaccctcttccacctctgactcatctttcgacg
ccggaaactcgcagcttcagcctacagaactacacgcgctcagagggcaacctgcagaga
ggcctgcagcactcgccgtacactccgagcatcgccgaacacgcggccttagaagccctg
gccatggaggacgaggccggcctgttgctggaggatgaggacatgctgccagatgacctg
gtgcagtacctccactcccaggtgcagttgaacggtggctcctacatgcacattgaggac
caaatagcttctagccaaagggacacctcccatccgtcgatggaggagatggaacagatc
cagacttcggggttgaacatgggcttcgccgggtcccacggtctccagccgccgcagaca
gaagagaggacgagcccgagcaagcttcccatccagtggaatgaagtgagctccgggagt
gctgacaggtcccccgagagggagctgaaccaccagacacagtgcggacggtggtcggcc
gcggaacatggacccgtagctgcgccttttggcagatttggaaacatggtggttcagcag
caggtgcccgttgatttccagaacagttgtgcgcaggtgaatcagcctcaaagtgcgtgt
tgcgttaaccccgcggtgaagctagagacaccgcctaactcctgcatggagatgagaggt
agcatctctacgaaccccttcggaaggcctaacttctcacagattgtcaacgggcctcct
cagcagggcttcaaacagcaggcctccaatggacctccgaaacagagccacttccagcag
aaccacaacagtagcacctcgtgccagatcggaaacaacctgatcctcagcagggcctct
atggacgtcctccccggcctctcccagggaactgctctccatcacaaccggcaggtccac
gtccctcgcccacccgacggttacaggaactcggtcaggacccagcagtacctcaaccca
gagacctctggtgagatccaggctggtctcaaccagcagcaacaactgcagagaagtggg
gaccactgctccctcgcacgtcaggtatctgggctgaagctggaggccccagaccacggg
tacttggagcagggcttcggggactgcctcccctacgacccattggatcgcaaggcctcc
tcgttccctgtcctggaggaccagtgcttgctcaactccatggctgagtccgtgggccaa
gcggttggcagtgtcggcgggagctcggccgccctcctctcccctggcagggaccaggtg
accagcacaatggatggcaatgtgcccggtatactagacgagggggtaagtctggacttt
ggtgccatgctggaggatggctatgaccagggtagcctggtctcaggtgtgttgagtccc
tccattttccagggtctgtccaggacctcgtcacgcctgaccacccctcgagcatccgcg
gccttccacagcgtggcgcccggcgtaaacaacatggcgatcggggacatgagctctctc
ctcaccacgctggcggaggagagcaagttcctcgctatcattcagtag
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integrated database retrieval system