Cyclopterus lumpus (lumpfish): 117749914
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Entry
117749914 CDS
T09199
Symbol
bmi1a
Name
(RefSeq) LOW QUALITY PROTEIN: polycomb complex protein BMI-1-A
KO
K11459
polycomb group RING finger protein 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
117749914 (bmi1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117749914 (bmi1a)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
117749914 (bmi1a)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAWUL
COMM_HN
COMM_domain
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-rbx1
zf-RING_5
zf-RING_UBOX
Prok-RING_4
Rad60-SLD
zf-RING_10
zf-C3HC4_4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
117749914
NCBI-ProteinID:
XP_034416624
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All DBs
Position
20:11118147..11132383
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AA seq
541 aa
AA seq
DB search
MELSESVQRGLQSLADPSAFDQSSYQVLVDVSFRSLLSSHADPGVLDQPELKRVDQIRLK
QSHTAATTFILEAVKHNADESTISSCLEELSFSADRIEVFYSTHQKHRRELQLLLASIGR
CPPQINDASWRLQYHVKNDQVNKVNEPFYLIALNTENKGSSEDINFTCTVEQLQDLVGKL
KDAAKSVEKASQMNCCSPLSTMHRTTRIKITELNPHLMCVLCGGYFIDATTIIECLHSFC
KMCIVRYLEASKYCPICDVQVHKTKPLLNIRSDKTLQDIVYKLVPGLFKNEMKRRRDFYA
EHPVDASNGSNEDRGEVADEDKRIITDDEIISLSIEFFDHCRLGGSMEDKQSKDHNMVAN
KRYLQCPAAMTVMHLRKFLRSKMDIPNAYQVEVMYEDEPLKDYYTLMDIAYIYTWRRNGP
LPLKYRVRPNXKKMKVSHAQQEGQNSASRSGPESDSASDKAGSPAGAPSTSSSLPSPATP
AQSPHPQLPHGPLKSTGPRPPAPGPPPPPTPSRPFTQFGGGGSSGIKPRKVSLNGASTSS
G
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggagttgtctgagtctgttcagagagggctgcagtctctcgccgatccgtccgccttc
gaccagagcagctaccaggtgctggtggacgtgtcgttccggagcctgctctcctctcac
gccgaccccggagtcctcgaccagcccgagctgaagcgggtcgaccagatccggctcaaa
cagagtcacactgcggcgaccaccttcatactggaggcggtgaaacacaacgcagacgag
tccacgataagctcctgcctggaagaactctcattcagtgcagacagaatagaagtattc
tatagcacacatcagaaacatagaagagaactccagcttcttttagcaagcattggaagg
tgtccacctcagatcaacgacgcgtcatggcgtctacaataccacgtgaagaacgatcag
gtcaataaggtcaacgagcctttctacctgattgcattgaacacagagaataaaggatcc
tcggaggatatcaacttcacctgcacagtggagcagctacaggatttggtgggaaagctc
aaagacgctgccaagagtgtggagaaagccagtcagatgaattgttgttcacctctctca
acgatgcatcggacgaccaggataaagatcaccgaactcaatccccacctcatgtgcgtc
ctgtgcggaggatatttcatagatgccacgaccatcatcgaatgtcttcactcattttgc
aagatgtgcattgtgcgctacctggaagccagcaaatactgtcccatctgtgatgtacaa
gtgcataaaacgaagcctctgctcaatattaggtctgacaaaactctgcaggacattgtg
tacaagctggtccccggcctcttcaaaaatgaaatgaagaggaggagagacttttatgcg
gagcaccccgtagatgcctcgaatggatcaaatgaggatcgtggagaggtggcagacgag
gacaagaggattattacagatgatgagatcatcagcctctctattgaattctttgatcac
tgcagactgggaggttcaatggaggacaagcagtctaaagatcacaatatggtggcaaac
aaaaggtacctgcagtgtccagcagccatgacggtcatgcatctgaggaagtttctgcgc
agcaaaatggacatcccaaatgcctaccaggttgaagtcatgtatgaagacgaacctctg
aaagattactacactttaatggacatagcatacatctacacttggagaagaaacggcccg
ttgccgctgaagtaccgagtccgacccaacngtaagaagatgaaggtgagccacgcgcag
caggaaggccagaacagcgcgagcagatccggtcccgagagcgattctgcaagcgacaaa
gccggaagtcccgccggggctccgtccacgtcctcgtcgttgccgagcccggcaacgcct
gcgcagtccccgcacccccagctcccgcacggcccattaaagtcaacgggaccccggccg
ccagcgccaggacccccgccccctccgacccccagtcggcccttcactcagttcggcggc
ggcggcagcagcggcattaagccccggaaggtctcactgaacggcgcgtcgacctcctcc
ggatga
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