Cyclopterus lumpus (lumpfish): 117749920
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Entry
117749920 CDS
T09199
Symbol
cngb3.1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-3
KO
K04953
cyclic nucleotide gated channel beta 3
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117749920 (cngb3.1)
Ion channels [BR:
clum04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
117749920 (cngb3.1)
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GFIT
Motif
Pfam:
cNMP_binding
CAF1A_acidic
Motif
Other DBs
NCBI-GeneID:
117749920
NCBI-ProteinID:
XP_034416631
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Position
20:13596279..13605490
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AA seq
742 aa
AA seq
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MGAPEPPPAQEEPSTPPPPAKEEKPPETKEEKEQPKKGEEKKEEVKTGEDKKEEEKKEEV
KKEEVSKKEEPTPGPAPAAPAGAPASGPAPAAPAGAPAGASANPDGAEGEEAPPPPPPPV
VYNREVDDMLRSIINKLREQTAVLKDKSIDPYATSPEITPPVTPILKKEDYLRMKEEERI
AKEEADKKKAEVDAKKAEEKKIKDEEKRLDAEKKAEEARLEEEAKKKAKFFTNIIVSFFD
TLLQPIENKMDGVLGQTLDPLDRRYIAWLSLVGLAFNYNVWFCTARLAFPYHNETNNPYW
IFFDILSDVVNVIDIIIWQPRLQFVKAGDVVKSRPMAKVHYRESQKLKIHIFSIIPFDLL
CLHFKFSTIYRVNRFIRIESFFEFSDRLESIMAKAYIWRVIRTTGYLLYALHLNSCAYFV
ASVYQGIKSTTWVYDGEGTAYLRCYYFAVRSLINIGGLPEPVTTFEISFQMANFFIGVFV
FSSLIGQMRDVIGAATAGKTYFRASMDGCVDYMNTYGIPKSVQNRVRTWYNYTWAAQGML
DESELLDKMPLVMRTAIAVDINLTTFQKIALFQGCDQQMLVDMLLRLKSIVYLPGDFVVK
KGDIGKEMYVIKSGAVQVVGGPDNSIVFVTLKAGCVFGEISLLQSAKDGGNRRTANVKAH
GFANLFVLEKKDLFDILVHYPESQKVLARKGRKLTKSKGPPPAKTKEEKQPGFALLGQKT
ETPKLIRLLTNFRKLKLLSQET
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgggggctcctgagcctccccctgcccaagaagagccttctaccccacctccaccagct
aaggaagaaaagccccctgaaacgaaggaggagaaagagcagccaaagaaaggggaggaa
aagaaagaagaagtgaagacaggggaggacaaaaaagaagaggagaagaaagaggaagtg
aagaaagaagaagtgtccaagaaggaagaaccaacaccaggaccagccccagctgctcct
gccggtgctcctgcctcaggaccagccccagctgctcctgccggtgctcctgccggtgct
tctgccaacccagatggagctgaaggtgaagaggccccccctccccctcctccacctgtt
gtctacaaccgggaagtagatgatatgctcagaagtataatcaataagttaagagagcag
acagcggttctcaaggacaaatccatagacccgtatgccacttcgccagaaatcaccccg
cccgtcacgcctattctaaagaaggaggactacctccggatgaaggaagaggagcgaata
gcaaaagaagaggcggataaaaagaaggcggaagtggacgccaaaaaggcagaggagaag
aagataaaggacgaggagaaaaggctggatgcggagaagaaagcagaggaggcgaggctg
gaggaggaggccaagaagaaagcaaagttcttcacgaacatcatcgtctccttcttcgac
accctcttacagccaatcgagaacaagatggatggcgtactgggacagaccctagatccc
ttagatcgtcggtacattgcctggttgtccctggtagggttggcattcaactacaacgtt
tggttttgcacggcgcggttggccttcccttaccataatgaaaccaacaacccctactgg
atatttttcgacattctgagtgacgtagtgaacgttattgacatcattatttggcagccc
cgactgcagtttgtcaaagccggggacgtcgttaaaagcagacctatggctaaggtgcat
tatcgggaatcacaaaaattgaagattcatatcttcagcatcatcccttttgaccttcta
tgcctgcactttaaattctccaccatataccgagtcaaccgctttatccggattgagtcc
ttctttgagtttagcgatcgacttgagagcatcatggccaaggcctacatctggagggtg
attcgcaccacaggttacctgctctacgccctccacctcaacagctgtgcatacttcgtg
gcctccgtgtaccagggtattaaatcgaccacatgggtttatgatggagagggcactgcg
tacctgcgttgttactactttgcagtccgcagtctcatcaacatcggtggtcttccagag
cctgtaaccacctttgagataagttttcagatggccaactttttcattggcgtctttgtg
ttctctagtttgattggacagatgagagacgtcataggagcagcaacagcaggtaaaaca
tatttcagggcatcgatggatggctgcgttgactacatgaatacctacgggattcccaaa
agtgtccagaatagagtccggacctggtacaactacacctgggcagctcagggcatgctg
gacgagtctgagctgctggataagatgcctctggtgatgagaactgccatcgccgtggac
atcaacctgaccaccttccagaagatcgcactgtttcagggctgtgaccagcagatgctg
gtggacatgttgctgaggctcaagtcaattgtctatctacctggagactttgtcgtgaag
aaaggcgacatcggcaaagagatgtacgtcatcaaaagtggagcggtgcaggtggtggga
ggacctgacaacagcatcgtgttcgtcacactgaaggccggctgcgtgttcggagaaatc
agtttactacagtcggccaaagatggaggaaacaggcgcacagctaatgtgaaggcgcat
ggctttgctaacctgtttgtcctggagaagaaggacttgtttgatatcctcgtccactac
ccagagtctcagaaagtgttggccagaaagggaaggaaacttaccaaatccaaaggccct
ccacctgccaaaaccaaagaggagaagcaaccaggttttgcattgcttggacaaaaaaca
gaaacaccgaaactaattcgacttcttaccaatttccgcaaattgaagcttctctctcaa
gaaacatga
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