Cyclopterus lumpus (lumpfish): 117749954
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Entry
117749954 CDS
T09199
Symbol
pks1
Name
(RefSeq) phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD isoform X1
Organism
clum
Cyclopterus lumpus (lumpfish)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ketoacyl-synt
KR
Acyl_transf_1
Ketoacyl-synt_C
KAsynt_C_assoc
PS-DH
PP-binding
adh_short
PKS_DH_N
CurL-like_PKS_C
Thiolase_N
DUF7080
ADH_N
RhiE-like_linker
Polysacc_synt_2
ACP_syn_III
Motif
Other DBs
NCBI-GeneID:
117749954
NCBI-ProteinID:
XP_034416671
Ensembl:
ENSCLMG00005022871
UniProt:
A0A8C3B298
LinkDB
All DBs
Position
20:4692525..4700408
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AA seq
2082 aa
AA seq
DB search
MEDEEDDIAVIGIGCNFPGGEGLDNFWRVLLEGKNCAADIPAERFDTTFWYDADDSKPGK
TQTTKAALIEGFNEFDHKFFGITEAEAEFMDPQQKLLLQCTYRALEDAGVAMESISGSRT
GVYIGLMNRDYEILRSNSPTTITHYNGTGTAMSVAANRLSFSFNLTGPSLAIDSACSSSL
VALHLACQAIKQGDCEMALCGGVSCIIEPRVFVALSKAKMISPEGTSKPFSSRADGYGRG
EGCGVVLLKPLKDAMKDCNKVWGIVSKTAVNQDGHSVTPITKPSMTQQQELLQRLYSESD
VANVQYIEAHGTGTPVGDPTEAGSISNAIAKARPPGSEALRIGSVKGNIGHTESAAGVAG
LIKVLLMMKHETIVPSVFYSEDNASVDVKALSISIPVKAERWETEGSLGKVAGINSFGFG
GTNAHVIIREYRKTTHSERPPTQIPKSCPKLFVISAACEESLHLSIADTRQRLCRNQSVD
LQALSYTSACGRSHSRHRYRKAFPTSSLSDLEQRLTSAVKTNVESIRSDIQVVFVFCGNG
VAYRGMCKQLLRDVPIFRDKVRAVENLFQSHKSISISRWLAGEYDNDVLGKPDVVQPLLF
AIQVGIAALLKHWGVKPDAVLGHSVGEVAAAHCSGLLSLEDAVKVVHHRSTLQSEVTGGK
MLVVGNVAVENVLQILPEFSGNICVAAFNSPQSCTLSGNADAIDILHQRLKKSTERNLFL
HELDVTAAYHSHMMDPILDDLEKSIEPLNANNKECKLFSTVTGYRCSDGDFVTGSYWARN
IREPVLFERALRAATKDKRSMVFVEIGPRRALQRNIHESLGKDAIVLSSVQPEKDYKTML
STVGKLFELGISVDWHQLHKGCETLPTALPVYQFVNTKKELNFEALRKGGDSSTFSPFTL
LSQTKQDNKEYMCNLSLETAPYLWEHKNNGVSIVPGAFYVELAYAAVMASLRPKKPVSQL
QLSVRFESLFALSSNCHQLKVKLEHAENGASFKIQSTVATHASGTYRCADGQPLLEEPIV
CLDMISQRCTLVMKRKEIYSILSLAGFEYGSVFKQLNDVRFGDEFKEAVTAIQVPGQLLQ
HLHEFFIHPVLLDYFLQMTAVVAIGRLTAKQGFPSAIGSVTISGPLQEEMVMYLRATEET
PDFLDVCGSFATPEGHVLVELKGVRISFLGNCSSALGSWFFNNEITAIPDIRDLQNCKIK
AIVFEDKLGIAKGLKPYIHPESALVESREHWMADQIRNVVFGSLTTNVDIENVLFIWGVE
DLSRSSSEKMLDCLVNCCELFRQIVLALKESKRSCTVRVITYRSTETMVDHVSPGFVLSG
MTRACAAEMTGLSFQLIDLASVTSEDIETLVCVINTCKEQEVVISEGQALTTRIARTPMR
GRTLCEGDKHYMSDFVLQTADPYRMTRLSAIPYDTNANPIQEKSVEVQLTNVCVQSSDFF
PVTTSHLKFGKTMYWNKHTSHNHKLLALDFSGIVTAVGKDVHNLRVGDQIASCYPVVATA
KVVIPETVCYSTKRLPFLKETPCVSYFVLAWEILQKMLFCVKHQHRKLIIISSNSASTLI
KVLALTANRSGWNVSSLSHFRGESLHFDQSHAFVFLPPFDHSWQGMHDSCSHNRHIIFVS
SDHISPSFSANMFAPKSEHIHVHKLDVANVLQRASLQMQKKDISDWLSSLGFDTVSLPLK
RETFQLSSIKEPENNADAESYFTTKTVQQVVLDHGEPDCQMSDIPLLTGSGQLFKQSCVY
IVTGGLSGLGFETVKFIAYNGGGCIATLSRSNLTDDFQFEMELLQRRYGVTIMNVKCDVS
VSMQVVDAISKIEQRFSSCPIKGVFHSAAVLHDALIENLDESLLRKVLQPKVSGALNLHC
ATLSNKLDFFVCYSSISSFIGNASQCNYAAANSFLDTFCHYRRNLGLAGQSINWGPLNLG
LLLNKDHFQKFLEAKGMMTMDVCDIQEALEKCLLMNRPQQVICKFNFKNLHIHVLSQNAS
LRERLSALVEMELKVELSNEPVVQHSSSAYESVRTIVSDISSVSVDELDDDLSLCALGID
SMLAMTLQNKIFQETGVNVPLVKILDPNSTLATLAALVKNNG
NT seq
6249 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaagaggacgacatcgctgttatcgggattggatgcaacttccctggaggt
gaggggttggacaacttctggagggtattgttggagggaaagaactgtgctgcagatatt
ccagcagagagatttgacaccactttttggtacgatgccgatgatagcaagcccggaaag
acacagacaaccaaagcagctcttatagagggttttaatgagttcgatcacaagtttttt
ggcattactgaagcagaggccgaattcatggaccctcagcagaaactccttctgcagtgt
acatacagggcattggaagatgcgggagtggctatggaaagcatcagtggaagcagaacc
ggagtttacataggtctaatgaacagggattacgagatactccgaagcaacagccctaca
acgataacccactacaatggcactgggacggccatgagtgtggctgccaataggctgtct
ttctccttcaacctcacgggcccttctcttgctattgacagcgcctgttcttcatctttg
gtggctctacatttagcctgccaggctataaagcaaggagattgtgagatggctctttgt
ggaggtgtcagttgtatcatagagccaagagtgtttgtagctctgagcaaggccaagatg
atctcacctgaagggaccagcaaaccgttctccagtagagcagatggctatggaagagga
gagggctgcggggtcgttctcctgaagcccttgaaagatgcgatgaaagactgcaacaaa
gtatggggcatcgtcagcaaaacagcggtcaaccaagatggtcactcagtcactccgatc
accaaaccctccatgactcaacaacaggagctgttgcagagactctactcagagtccgac
gttgcaaacgtccagtacatagaggcacatgggaccggaactccagttggcgatccaacg
gaggcaggaagcatttcaaacgccatcgctaaagccagacctccaggttcagaggcactc
cggatcggctctgtgaagggcaacattggacacacagaatctgctgctggagtggccgga
ctcattaaggtactcttaatgatgaagcacgagaccatcgttccctctgttttctattca
gaagacaatgccagtgtagatgtaaaagcgttgagtataagtattcctgttaaagcagaa
agatgggagaccgaggggtccttaggaaaggtagctgggatcaacagctttgggtttgga
ggcacaaatgcacatgtgattataagagagtacagaaagaccacccactcagaaagacca
cccactcagattccaaaaagctgtccaaaactctttgtaatatctgcggcctgtgaggaa
tcgttacacctgtccatcgctgacacccgccagaggctttgccgaaatcaatcagttgat
ttacaggcattgtcatacacttcagcatgcggaaggagtcattccagacacagatatagg
aaggccttcccaacatcttccctgtcagatttagagcaacggctaacatctgcagtgaaa
acaaatgttgagtcaataaggtccgacatccaggtggtctttgtgttttgtggaaacggg
gttgcttataggggtatgtgcaagcagctcctgagagatgttcccattttcagagacaag
gtcagagcagttgaaaatctttttcaaagtcataaaagcatcagcattagccgatggctc
gctggtgaatacgataatgatgttctcggcaagccggatgttgtccagcctcttctcttt
gcgattcaggttggcattgccgctctcctgaaacactggggagtcaaacctgacgccgtg
ctcgggcactccgttggtgaggtcgccgccgcccactgttctggactcttgtctctcgag
gatgctgtgaaagtggtgcaccaccgcagtactcttcagagtgaggtcacagggggaaaa
atgcttgttgttgggaatgtggccgttgaaaatgtattacaaatccttccagagttttct
gggaacatttgtgttgcagcattcaacagcccccagtcctgcacgctgtcagggaatgca
gatgctatagacatccttcatcagaggctgaagaagtccacggaaagaaatctcttcctc
catgagttggatgtgacagcagcataccatagccatatgatggatcctatattagatgac
cttgagaaaagtattgagcccttgaatgccaacaacaaagaatgcaaactgttttcaaca
gtgactggttaccgttgttcagatggcgactttgttacaggcagctactgggcaaggaac
attcgggagccagtcctatttgagcgtgcactgcgtgctgccaccaaagacaagcgatca
atggtctttgtggagattggacctcgtagggctctccaaagaaacatacatgaatctttg
gggaaagatgccatagttctttcctctgtccagccagagaaagattacaaaacaatgttg
tctaccgtgggaaaactttttgaactgggcatcagtgtggactggcatcagctccacaag
ggttgtgagacattgcccacagctcttccagtctatcagtttgtcaacacaaagaaagaa
ttgaattttgaagctttgagaaaaggtggtgactcgtctacattctccccctttacgctt
ttgtctcaaacgaagcaggataacaaagagtacatgtgcaacctctcattggagactgcc
ccatatctttgggagcataaaaacaatggcgtttccattgttccaggcgcgttctatgtt
gagctagcttatgccgcagtgatggccagtttaaggcccaagaaaccggtgtctcagctc
cagctcagtgtaagatttgagagtctgtttgcactcagctcaaactgccatcagttgaaa
gtaaaacttgagcatgcagagaatggagcttcattcaaaatacagtctactgttgcaaca
catgcctccggcacatacaggtgtgcagatggccaaccgctgttagaagaaccaatcgtt
tgtctggacatgatctcccaacggtgcacattggttatgaagagaaaagagatttattca
attctttctctcgcaggatttgaatacggatctgtcttcaaacagcttaatgatgtgcgt
tttggagatgaatttaaggaagccgtgacagcaattcaggttcctggtcaacttctacaa
caccttcatgagtttttcattcaccctgtgttattggactatttcctgcaaatgacagct
gtggttgctatcggtcggctaactgcaaagcagggattcccctcagctatcggtagtgta
accatttcaggaccactgcaagaagaaatggtcatgtacttacgagccactgaagagact
ccagacttcctggatgtatgtggtagctttgccaccccagagggtcatgtgctggtagaa
cttaagggggtgaggatctcatttttgggcaattgctcaagtgctcttgggtcgtggttc
ttcaacaatgaaataactgcaattcctgacatacgagacttgcaaaattgcaaaataaaa
gcaatagtttttgaagacaaacttggcatagctaaagggctcaagccatacattcaccca
gagtcagcactcgtggagagcagagagcattggatggcagaccaaattcgaaatgtagtg
ttcggctcacttaccaccaacgttgatatagaaaatgttctcttcatctggggtgtagag
gacctcagtcgctcgtcatccgagaagatgcttgactgcttggtgaattgctgcgagctg
tttcgccagattgttttagccttgaaggagagcaaacgctcttgcactgtccgtgtcatt
acttatcgatccacagaaacgatggtcgaccacgtcagtcctggctttgtgctgtctggt
atgacacgggcttgtgcagcagagatgacgggtctctcttttcaactgattgaccttgct
tctgtgaccagtgaagacattgaaacgctggtttgtgtgataaacacatgcaaagaacaa
gaggttgtgatcagcgaaggccaagcattgacaacgagaatagcacggacgcccatgagg
ggcaggactttatgtgaaggtgataagcactatatgagcgactttgttctacagacagct
gatccatacagaatgactcgcttgtctgccatcccctacgacacaaatgcaaatcctatc
caagagaagtcagttgaggttcagctcaccaatgtgtgcgtgcaatcatccgatttcttt
cccgtcaccacatcgcatttgaagtttggaaagacgatgtattggaacaagcacacgtca
cacaatcacaagcttctcgctttggattttagcggcattgtcacagctgtcgggaaggac
gttcacaatctaagagtgggagatcagattgcttcatgctatccagtcgttgccactgcg
aaggttgtgattcccgaaacggtgtgctacagcacaaagagactcccgtttctgaaagag
acgccttgcgtgtcttacttcgtactcgcatgggagatcctgcagaaaatgctgttttgt
gtaaaacaccaacacaggaagctgatcatcatctcctccaactcagcctcaaccctgata
aaagttttggctctgacggcaaacaggtccggctggaacgtttcctcattgtcacatttc
agaggagaatctctgcattttgatcagagtcatgctttcgtgtttctgcccccgttcgat
cactcttggcaagggatgcatgacagctgtagtcataacagacacattatatttgtgagt
agcgatcacatctcaccctcattctcagcaaacatgtttgcaccgaagagtgaacacatc
catgttcataaacttgacgtggctaatgttctccagagagccagtctgcaaatgcagaaa
aaggatatctctgattggctatcgtcgttaggctttgatacagtatctctacctttgaaa
agagagacttttcaattatctagcataaaagagcccgagaacaatgcagatgctgagtcc
tacttcacgacaaagacggtgcagcaagttgttctagatcatggagaacctgactgtcaa
atgtcagatatccctttgctgacggggtctggacaactctttaaacaaagttgtgtttat
attgtcactggagggctctctggtttgggatttgagacagtgaagttcattgcctataac
gggggaggttgtattgcaacgctgtctagaagtaatctgactgatgacttccagtttgag
atggaactcctccagagaagatatggagttacaatcatgaatgtcaaatgtgacgtttct
gtgtcgatgcaggtcgtagacgcgatctcaaagatcgaacaaaggttctcctcttgtccg
atcaaaggagtgtttcacagtgctgcagttttacacgacgcgttgatcgaaaacctcgac
gagtccctcctccgaaaggtgctgcagccgaaagtgagtggggctctaaaccttcactgt
gcaacactttccaacaaactggatttctttgtgtgctactcctccatctcttccttcatt
ggcaatgcctcacaatgtaactacgcggcagcaaattctttcctcgacacattctgccat
tacaggagaaacctcggtctcgctggacagtccatcaactggggtcctttgaacctcggc
ctcttgttgaacaaagaccatttccaaaagttcctggaggccaaagggatgatgacaatg
gacgtgtgtgacatccaagaggcacttgaaaagtgtcttctcatgaacagaccacaacaa
gtcatatgcaagttcaacttcaaaaatcttcacattcacgttctttcacaaaacgcgtct
ctcagagagcgtctgtcagcgctcgtggaaatggagctaaaggttgaactgagtaatgaa
cccgtggtgcagcattcgtcttccgcgtacgaaagtgtgagaacaattgtcagcgacatc
agcagcgttagcgtagatgagctggatgacgacttatctctgtgtgcactgggtattgac
tcgatgttggccatgacactgcagaataagattttccaagagacgggcgtaaatgtacct
ttggttaaaatattggaccccaacagcacactggccactttggcagctcttgtaaagaac
aatggataa
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