Cyclopterus lumpus (lumpfish): 117749957
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Entry
117749957 CDS
T09199
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117749957 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117749957 (rbm26)
03041 Spliceosome [BR:
clum03041
]
117749957 (rbm26)
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117749957 (rbm26)
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
117749957 (rbm26)
Spliceosome [BR:
clum03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117749957 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
PWI
RRM_Nup35
zf-CCCH
zf_CCCH_4
COG5_N
RRM_3
Motif
Other DBs
NCBI-GeneID:
117749957
NCBI-ProteinID:
XP_034416682
Ensembl:
ENSCLMG00005004209
LinkDB
All DBs
Position
3:9423839..9434959
Genome browser
AA seq
1008 aa
AA seq
DB search
MIIENLDALKTWLSETLEPICDADPSALAKYVVALVKKDKTEKELKALCIDQLDVFLQKE
TQPFVDKLFEAINNKNYLPPPDQPSSLIKVEKDEPKKDETNREDEREKKFPRRVNHSPPQ
SSSRYSRDIRRGDDRKRDDRSRKREYDRIPPRRDSYRDRFNRRRGRSYSRSRSRSWSKDH
IRERDRERDRDRDRDRDRDRDRDRSRSRSHSRTRSGSRSRERDSGKLKFDHDRVDRPENA
DCFTPAALVPTATTSHFPVPTLSSTITVIAPTHHHSNNTPESWSDFRPGQPVDRGLFNRG
PPPQQRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVNLPNMLPFQPPPIPGGDAPPPP
GPPPPLMNPPPVNLRPPGLPPGSLPPSLPPVAGPPPPLPPLQPSGMDAPPNSMTSSVPTI
VTSGMRSSLPQAPVPRFTSDHYETDVYNPEAPSITNTSRPIYRHRVSAQRPNLIGLTMGE
VDQPPRDKVPNNSMRIVMESDLRKRPPVSHDGGLPLKKPWFDKPNFNKPNHQGYHTRVPF
SPNTKLLVRQIPPELNNISKLNDHFSKFGTIVNLQVAFQNDPEGALIQFASPHEAKQAMQ
STEAVLNNRFIRVHWFRDDGTDGQSISQQHPQQQTDMQASDVFLKQSVKDRLGPLLNANS
EPSQDSSVASQQNPSKVSVKDRLGFSAKPAAPIEKVFSTSMGLTKTVYNPDALKAAQKNS
EEALKNKQEALRLQQDVRKKKQEILEKHIETQKLLISKLEKNKTMKAEDKAKIMETLGML
TKSITKLQEEIKGISGSNNQLRTSKTRAQAQKELLDAELDLYKKTQAGEDIALLKIKYTQ
LQIEAARRGILSPGRGRGVHARGRGALRARGRGSRGRGRGVSLHAVVDHRPRAVEIFGFT
EADHVDLLPHFAQFGEIEDCQIDGNNLSAVITFKTRAEAEQAALHGVRFNNQTLRLAWHK
VVKTLSAADADDAEPEEDEYPEGSLSDDALLQDDDEEEDDNEPRSWRR
NT seq
3027 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaaccttgatgccttgaaaacatggctgtctgaaaccctcgagcccatc
tgtgatgcagacccctctgccctggctaagtatgttgttgctctggtgaagaaagacaaa
actgagaaggaacttaaagccctatgtatagaccagttggatgtatttctccagaaagag
acccagccatttgtggataagctgtttgaagccattaacaacaaaaactacctcccgccg
ccagatcaaccatcctctctgatcaaagttgagaaggatgagccgaaaaaagatgagaca
aaccgcgaagacgaacgggagaagaagtttcctcggagggtgaatcacagtccaccccaa
tcaagttctcgttacagcagagatatcaggagaggagatgatcgtaagagagacgaccgc
tctagaaagagggaatatgaccgcattccaccacggagggactcgtaccgcgatcgcttc
aaccgcaggagaggccgcagttacagtcgtagccgcagccgcagttggagcaaagatcac
atccgagaacgcgaccgagaaagggatagggatagagacagggacagggaccgggacagg
gatcgagatcgcagcaggagccggtcacacagcagaactcggtctggaagcaggagtaga
gaacgagattctggaaagttgaagtttgatcacgatcgagtggacaggccagagaatgct
gattgctttaccccagcagctctagtccccactgcaaccacttcacatttccctgtgcca
acactgagcagcaccattacagtcattgcccccacacatcatcatagcaacaatacccct
gagagttggtcagacttccgccctgggcaacctgtggatcgtggcctttttaatagagga
cccccccctcaacagaggaagcgatgccgtgactatgatgaaaagggcttctgcatgaga
ggggacatgtgtcctttcgaccatggaagtgacccagttgtcgtggaggatgtcaatttg
cccaacatgctgcccttccaacctccaccaatcccaggtggcgacgcaccaccgccccca
ggccccccaccacctcttatgaaccccccacccgtgaacctgcggccccctggactccca
ccaggttccctcccacccagccttccacctgttgcaggtcctcctcctccacttcctcct
ctgcaaccgtcagggatggatgctcctcccaattccatgaccagctctgttcccaccatt
gtcacctctgggatgcgctcctcacttccccaggccccagtgccccgcttcacctctgac
cactatgagacagatgtgtataatcctgaggctcccagcatcaccaatacctccaggcca
atctaccgccatcgggtcagtgcccagagacctaacctgattggcctcacaatgggagaa
gtggaccagccaccaagagacaaggtcccgaacaacagcatgaggatcgttatggaatcg
gatttgaggaagagaccacccgtctctcatgatggaggccttcccttgaaaaaaccttgg
tttgacaagcccaactttaacaaacccaaccaccagggctaccacacaagagtcccattc
tccccaaacaccaagctgctggttcgtcaaattcctcccgagctcaacaacatcagcaaa
ctcaatgaccatttcagcaagtttggcaccattgtcaacctacaggtggccttccagaat
gacccagaaggggcactgatccagtttgcctccccacacgaggccaagcaggctatgcaa
agcacagaggctgttctcaacaaccgcttcatcagggtgcactggtttcgtgatgatggg
actgatggccagtctatctcacagcagcaccctcagcaacagacggacatgcaggcctca
gacgtgtttcttaagcagtctgtcaaagatcgccttggacccctgctcaatgcaaactct
gagccatcacaagattccagtgtcgcctctcagcagaatccctcaaaggtgtcggtgaag
gaccgtttggggttctctgccaaaccagcagctcctattgaaaaagtgttttctacatcg
atgggcctcacaaagactgtatacaatcctgatgccctgaaggcagcccagaaaaactca
gaggaagccctgaaaaataaacaggaagctctaagactacagcaggatgtaagaaaaaag
aagcaggaaatattggagaagcacattgagacacagaagctcctgatatctaaacttgag
aagaacaaaacaatgaaggcagaggataaagccaagatcatggaaactttaggcatgcta
accaagagcatcaccaaacttcaagaggagataaagggaatctcaggcagcaacaaccag
ctacgcacatccaagaccagggcacaggcacagaaggaactgctggacgcggagctggac
ctgtacaagaagacccaggccggagaggacattgctttgttgaaaataaagtacacgcag
ctgcaaattgaggcggctagaagggggatcctgtctcccggaagaggccggggggtccac
gctcggggccgtggtgctctcagggcccggggacggggctccagaggacggggaagaggt
gtgtcgctgcatgcagtcgtggaccatcggccgagagcggtggagatttttggattcact
gaggcagaccatgtggacctgctgccacactttgctcaatttggagagattgaagattgc
cagattgatggaaacaacctgtctgcagtcatcactttcaagaccagagcagaggcagaa
caggcggcgcttcatggagtgaggttcaacaaccagactttgcgtctggcctggcataaa
gtggtcaagactctcagtgctgcggatgctgatgacgctgaaccagaggaagatgagtac
ccagaggggtcgctgagtgacgatgcattgctgcaggatgatgacgaggaagaagacgac
aacgagcctcgctcttggcgcagatga
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integrated database retrieval system
