Cyclopterus lumpus (lumpfish): 117750008
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Entry
117750008 CDS
T09199
Symbol
slc12a1
Name
(RefSeq) solute carrier family 12 member 1
KO
K14425
solute carrier family 12 (sodium/potassium/chloride transporter), member 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clum02000
]
117750008 (slc12a1)
04147 Exosome [BR:
clum04147
]
117750008 (slc12a1)
Transporters [BR:
clum02000
]
Solute carrier family (SLC)
SLC12: Electroneutral cation-coupled Cl cotransporter
117750008 (slc12a1)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
117750008 (slc12a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLC12
AA_permease
AA_permease_N
AA_permease_2
Motif
Other DBs
NCBI-GeneID:
117750008
NCBI-ProteinID:
XP_034416733
Ensembl:
ENSCLMG00005020013
LinkDB
All DBs
Position
3:23522994..23535529
Genome browser
AA seq
1044 aa
AA seq
DB search
MERLKSNGGEHDNPGYDSTLDEPPIYVETNFSNGDHRTVRPSVVSAFGHDTLDRGPNIDF
YRNAGSVSGHRAVRPSLQELHNVFQKNGAISVPDTVEDDGEGSDGTPSDDLESAVPVETN
AGALKFGWIRGVLVRCMLNIWGVMLFIRLSWIFGQAGWGLGIVVIALSCVVTTITGLSMS
AICTNGVVRGGGAYYLISRSLGPEFGGSIGLIFAFANAVAVAMYVVGFAETVVELLKDNA
AIMVDEINDIRIIGCITVVLLLAISIAGMEWEAKAQILLLVILLAAIVNVFAGTFMPATD
DKKSKGIFNYDSRIFLENFTPDFRDGESFFSVFAIFFPAATGILAGANISGDLRDPQEAI
PKGTLLAILITGITYLGVALSVSATVVRDATGNVTDLVTAGLSCNGSSAVAACELGYNFS
SCAVEKCIFGSINTNQVMTMVSGFGPLIIAGTFSATLSSALASLVSAPKVFQALCKDNIY
KILHFFAKGYGKNNEPIRGYVLTFIISVAFILIGNLNTIAPIISNFFLASYALINFSCFH
ASYAKSPGWRPAYKFYNMWLSLLGALLCCVVMFVINWWAALLTYAIEILLYIYVMVKKPD
VNWGSSTQAVTFVSAVSNALSLSGVEDHVKNFRPQILAMTGSARARPALLDLAHSFSKNY
GLCLTCEVIVGPRSEVLEEMNAGMEKNQLWLRKTKRKAFYAAVACDRFRDGAESLLQASG
LGRMKPNTFLIGFQRNWRTAGTEAVQSYVGVLHDAFDFEYGTLILRMNQGLDVSHIVEAE
EEMLKSAKEQQALDKDMMPNGGKAKGLFRKSRKSSKPVLTTRVSVCGPPPPQVAKMNERL
LEASAQFQKKQPKGTIDVWWLFDDGGLTLLLPYILTTRKKWKDCKLRIFIAGQPGRCDQD
KQEMQSLLEKFRINCTDIHVIDNIHVQPSAESFKKLEDMIEPFCLHDGSKDAAQAEAMRK
EQPWKITDEELSSFEEKTNLQVRLNEVLQENSKSANLIIVSMPIARKESVSDFLYMAWLD
ILTKDLPPTLLIRGNHKSVLTFYS
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggagaggctgaagtctaacggaggggagcacgataaccccggttacgattccactctg
gatgaacctcccatctacgtggagacgaacttctccaacggggaccaccggacggtccgg
ccctcggtggtcagtgcctttggtcatgacactttggaccggggacccaacattgacttc
tatcgcaacgcgggcagtgtgagtggtcaccgggcagtgcgaccgtctctgcaggagctc
cacaacgtgtttcagaagaatggagcgatctccgtgccagacaccgtggaggacgatggt
gaggggagtgacgggaccccctctgatgatctggagtctgccgttcccgttgaaaccaac
gcaggagcactaaagtttggctggataaggggcgtcttggtgagatgcatgctgaacatc
tggggggtcatgttgttcatccgtctgtcctggatttttggtcaggcaggctggggtctg
ggaatcgtggtgattgctctcagctgtgtggtcaccaccatcaccggcctttcaatgtct
gccatttgcactaatggtgtggtcaggggaggcggagcctactacttgatatctcgcagt
ttggggccagagtttggcgggtcgattggtctaattttcgcctttgccaatgcggtggct
gtcgctatgtacgtggtggggttcgctgagaccgtggtggagttgctcaaggataacgcc
gccatcatggtggatgaaataaatgacatccgaatcatcggctgcattaccgtggtgttg
ctgttggccatatccattgctggaatggaatgggaggccaaggcacaaattcttctactc
gttatcttgctggcggccatagtgaacgtattcgcgggaactttcatgccagcaactgat
gataagaagtccaaaggcattttcaattatgactcaagaatatttttagagaattttaca
ccagattttcgagacggggagagctttttttcagtgtttgccatctttttccctgctgcg
accgggatcctggctggagcaaacatctccggtgacttgcgggatccccaggaagccatc
cctaaaggcaccttgctggccatcctgataactggcatcacctatctgggagtggccctc
agtgtttctgccactgttgtccgtgacgccacgggaaacgtaactgacctcgttactgct
ggtttgtcgtgtaacggttcgtcggctgtagccgcctgtgagctcggctataatttctct
tcctgcgcggtagagaaatgcatatttggctcaataaacaccaatcaggtgatgaccatg
gtctctgggtttggtcccctgatcattgctggaacgttctccgccacactttcatcagcc
ctggcttccctcgtcagcgctcccaaagtcttccaggcactgtgtaaagacaacatctac
aagatcctgcacttctttgccaaaggatacggcaagaacaacgagccaatccgtggctat
gtcctcacattcattatttcggttgccttcattctcattggtaatctcaacaccatcgct
cctatcatctcaaacttcttcctggcatcttatgccctcatcaatttctcctgcttccat
gcatcctacgccaagtctccaggttggagaccggcatataaattctacaacatgtggctc
tccctgttgggcgcattgctctgctgtgttgtcatgtttgtgatcaactggtgggcggct
ctcctcacgtacgccattgaaatcctactctacatttatgtcatggtcaagaagccagat
gtgaactggggttcgtccacgcaggcggtgacatttgtgagtgcggtcagcaacgctctg
tctctgtctggggtcgaggatcacgtcaagaacttcaggcctcagatcttagcaatgacg
ggatcagcacgggccagaccggctctcctggacctggctcactctttctctaagaactat
ggactctgtctcacctgtgaagtgattgtgggtccgagatcagaggtcctcgaagagatg
aacgccggcatggagaagaaccagctgtggctcaggaaaaccaaacgcaaggcattctac
gctgccgtggcctgtgaccgctttcgggatggggctgagagcctgctgcaggcttctggt
ctcggccgcatgaagccgaacacattcctcatcggcttccagaggaactggaggactgcg
ggcacagaggcagtgcagagttatgtgggagtactgcacgatgcatttgactttgagtac
gggacattgattctgaggatgaaccagggactcgatgtgtcgcacatcgtggaagctgaa
gaggagatgctcaaatcggcgaaggagcaacaggcactggacaaagacatgatgccgaac
ggtgggaaagcaaaaggactgttcaggaagtccaggaagtcctcgaagccagtgctcacg
accagagtgtcagtgtgcggccccccgcccccgcaggttgccaagatgaacgagaggctg
ttggaggccagcgctcagttccagaagaaacagccaaagggcaccattgatgtgtggtgg
ttgtttgatgatggaggtcttacgctgctgctcccctacatcctcactaccaggaagaag
tggaaagactgtaaattaaggatcttcatcgcagggcagcctggacgctgtgaccaggac
aagcaggagatgcagtctctgttggaaaaattcagaattaactgcacggacatccacgtc
atcgataacatccacgtccaacccagcgctgaaagctttaaaaagttagaggacatgatt
gagcctttctgtctgcatgacgggtctaaagacgccgctcaggctgaagccatgcgaaaa
gagcagccctggaaaatcacagacgaagagctgagctcctttgaggagaagaccaacctc
caggtacggctgaacgaggtgcttcaggaaaactccaaatcagccaatctgatcattgtg
agcatgcccattgcccggaaggagtccgtctctgatttcctctacatggcctggctggac
attctgacaaaggaccttccgcccaccctgctcatcagaggcaaccacaagagtgtgctg
acgttctactcctga
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