Cyclopterus lumpus (lumpfish): 117750058
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Entry
117750058 CDS
T09199
Symbol
trappc10
Name
(RefSeq) trafficking protein particle complex subunit 10
KO
K20307
trafficking protein particle complex subunit 10
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117750058 (trappc10)
Membrane trafficking [BR:
clum04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
117750058 (trappc10)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC10_1st
TRAPPC10
Ig_TRAPPC10
Foie-gras_1
TPR_12
SNAP
TPR_2
TPR_14
TPR_7
Gryzun-like
TPR_19
TPR_10
TPR_8
Motif
Other DBs
NCBI-GeneID:
117750058
NCBI-ProteinID:
XP_034416815
Ensembl:
ENSCLMG00005009323
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All DBs
Position
21:complement(20768511..20785161)
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AA seq
1265 aa
AA seq
DB search
MECQEEKPIIYTMENKPIVTCAGDQGLFTSLYTSLAQQLPREPMEWRRTYGRAPKMIHLE
ANFVQFKEELLPKEGNKALLTFPFLHIYWTDCCDTEAYKSAVKEDMTRWQSSLRTHGSAD
WVIIVVETNDTKKKNKTNILPRSSIVDKIRSDFCNKQNDRCVVLSDPLKDSSRSQESWNS
LLLKLRTLLLMSFTKNLGRFEDDMRTLREKRTQPGWSFCEYFMVQEELAFVFEMLQQFED
ALVQYDELDALFTQYVLNFGAGDTANWLGSFCAPVRSWSGLLLRRPIDMEKRDGIQRGEA
SLLDLRSYLFSRQCTLLIFLLRPWEVTQRALELLHNCVQELRLLEVSVLEGALDCWVFLS
CLEVLHRIEGCCDPAQLAANCSHTVGLWAYATDKLKSLGELCGLVSEKGPTSEDLNRTVD
LLAGLGDERPETVSSLQSPYKKLKEALSSVEAFERHYLELSHAAMEMYRAIGRLRSARLV
GKSLAEFYMRKGDPERAETFLQEALKSYTSEGWSLPVTHTRKQIAECQKLLGRTEDYLQT
SALLAGDVNLTTEERKHFCQEILTFAGKSEDQSPKATLSMAVFAQLTRLQFRPATASVHS
GAVLQAELTLRCLMPVSVHIQQLAVSVHFDLERAGTNGRSKGAPRQTNPGTVEFSQAHPS
AGPASSSAAGPPLELDEIEDRSPTDNSLNSTGVVCKNTHLVMRCHDSASPPDTPNCVSPP
SVTVKDDGQMLKVQDVTLEPGNNSIVFTAPSGQPGTYTLRQLYATVGQVQFVLPHIYPSV
QYEVYSQEPQLTVEPLSEPLLAGLPQMVKFTLLTGHYAVKKGDALQLSNTDTMPVLPSAS
CTARINSPAAELVGESSLFIQSSEKVTSISLPATPPYHTLEFHLEVLCVIPHGCDRPANE
RLTNGEVRHRPRSYSHPDTPMTAIDQRMSIDCPWSIYSTLLALTFYIPFKTKHTLLSAGN
RKYIQVCVQNMSDVNFTLAEVQLAEKQQATLELQSLNTKTQQLLCSKHSVFCLWEVRWKD
DLPSCLQCIFSANFSPPKQDVSTFKPFHYQFQLERVTTLYSVRAEILPPASEQHCRSGFL
CGLEVCITRLTEPTEGEAAEDSKTDADGLKTTKLMYEVADSSSNWAVCGKSSGMVSMPMA
ADATHKVQIEVMPLFAGHLPFPKIKVLKYLPHTAAVAIQPDPDSCVENDSLSLLDKVLDD
QGDTASIRSRGSVHSVGSGDQQQQKGVAMPRLEPFAAGQVFNHSHTQQVLVLPATDDHIM
EVNAT
NT seq
3798 nt
NT seq
+upstream
nt +downstream
nt
atggagtgtcaagaggaaaagccgatcatctatactatggaaaacaagccgattgtgaca
tgtgctggagaccagggcttgttcacgtctctttacacgtcattggcccaacaacttccc
agggagccaatggagtggaggaggacatacggccgcgcaccaaaaatgatccacctcgag
gccaacttcgtccagtttaaagaggagctccttcccaaggagggcaacaaggctctcctc
accttccccttcctccacatctactggaccgactgctgtgacacggaggcgtacaagagc
gcggtgaaggaggacatgacgcgctggcagagcagcctgcggactcacggctccgcagac
tgggtcatcatcgtcgtggagaccaacgataccaagaagaagaacaagaccaacatcctg
ccgcggtcgtctatcgtggacaaaatccgcagcgatttttgcaacaagcagaacgacagg
tgtgtggtgctgtcggatcctctgaaggactcgtcccggtctcaggaatcctggaattcg
ctgctgctcaagctgcggaccctcctcctcatgtccttcaccaagaacctggggcgcttt
gaagacgacatgcgcacgctccgagagaagcgcacgcagcccggctggagcttctgtgaa
tacttcatggtccaggaggagttggcctttgtattcgagatgctgcagcagtttgaagat
gccttggtccagtacgatgagctcgacgctctttttacccaatatgtccttaacttcgga
gctggagacacggccaactggctcggatcgttctgcgccccggtgcgcagctggagcggc
ttgctgcttcggaggcccatcgacatggagaagagggacgggatccagcgcggggaggcc
agcctgctggatctacggagctacctgttctcccgccagtgcaccttgctcatcttcctc
ctgaggccctgggaggtcacccagcgggccctggagctgctgcacaactgtgtgcaggag
ctgcggctgctggaggtgtcggtgctggagggggcgctggactgctgggtgttcctcagc
tgcttggaggttctgcacaggatcgagggctgctgtgatccggcccagttggctgcaaac
tgctcccacaccgtcggtctgtgggcctacgcgaccgacaagctgaagtccctgggggag
ctctgcggcctggtgtcggagaaggggcccacatccgaggacctgaacaggactgtggat
ctgctggccggacttggggacgagaggcccgagactgtcagcagtttgcagagcccttac
aaaaagctgaaggaagccttgtcgtctgtggaagcttttgaaagacactatctggaactc
tctcatgctgccatggagatgtacagggccatcggccggctgaggtccgcccgactggtg
gggaagagcctcgccgagttctacatgaggaagggggaccccgagcgggcagaaaccttc
ttacaggaagctctgaagtcgtacacatcggagggatggagcctccctgtcacccacacc
aggaaacagatcgccgagtgtcagaagctgctgggcagaactgaagactacttgcaaacc
agcgccttgctggctggtgatgtgaatctgaccacggaggagaggaagcacttttgtcaa
gagattctgacctttgccggcaagtctgaggatcagtcccccaaagcgaccctcagcatg
gccgttttcgcccagctcacgcgtctccagttccgtccggccaccgcgtcggtgcactcc
ggggccgtcctgcaggcggagctcaccctgcggtgtctgatgcccgtgtcggtgcacatc
cagcagctggctgtcagcgttcacttcgacctggagcgcgcgggcaccaacggaaggtcc
aagggagcgccgaggcaaaccaacccgggcacggtggagttcagccaggcccacccgtcg
gcgggtcccgcgtcgtcctcggcggccggacccccgctggaactcgacgagatcgaggac
cggagccctacggacaattccctcaactccacgggagtggtgtgcaaaaacactcacctg
gtcatgcgttgccacgacagcgcctcgccgccagacacgcccaactgcgtcagccctccc
tccgttaccgtgaaggatgacgggcagatgctgaaagtgcaggatgtgacgttggagccc
gggaataacagcatcgtattcacagcaccgagcggacagccgggtacctacacgctgcgt
cagctgtacgccaccgtgggtcaggtgcagtttgtactgcctcatatctacccatcggtc
cagtatgaagtctattctcaggagccccagctcactgtggagcctctctcagagcccctg
ttggccggcctgccccagatggtgaagttcactctgctgacgggtcactacgccgtgaag
aaaggcgacgctctgcagctcagcaacaccgacaccatgcccgtcctgccctccgccagc
tgcaccgctcgcatcaacagccccgcagccgagttggtgggggagagctccctgttcatc
cagtcgtctgagaaggtgaccagcatcagcctgcccgccacgcctccttaccacaccctg
gagttccacctggaggtcctgtgcgtcatcccgcacggctgcgaccggcccgccaacgag
cggctgaccaacggggaggtccgccaccggccgcgcagctacagtcaccctgacacgccc
atgaccgccatcgaccagaggatgtccatcgactgtccgtggtccatctactccacgctg
ctcgccctcaccttctacatccccttcaagaccaaacacactctgctttcggctggtaac
cggaagtacatccaggtgtgtgtgcagaacatgtcggatgtgaacttcacgctggcagag
gtgcagctggcggagaagcagcaagcaacgctggagctgcagtccctcaacactaaaact
caacagcttttgtgcagcaagcacagcgtgttctgcttgtgggaggtgaggtggaaggac
gacctgccctcctgcctccagtgcatcttctccgccaacttctctccgcccaagcaagac
gtctcgaccttcaaacccttccactaccagttccagctggagagagtcacaacgttgtac
agcgtgagagccgagatcttgcctcccgccagcgagcagcactgccgctccgggttcctg
tgcgggctcgaggtgtgcatcacgcggctgaccgagcccaccgagggagaggcggcagag
gacagcaagactgacgccgacggcctcaaaaccaccaaactcatgtatgaagtggccgac
agtagcagtaactgggcggtgtgcgggaagagttcggggatggtgtccatgcccatggcg
gcggacgccacccacaaggtgcagatcgaggtgatgccgctgttcgcgggacacctgccc
ttccccaagatcaaagtgctgaagtacctgcctcacaccgcagcagtagccattcaacca
gaccccgacagctgcgtggagaacgacagcctctccctgctggacaaggtgctggacgac
cagggcgacacggcgagcatccgcagccggggcagcgtgcactcggtgggcagcggcgac
cagcagcaacagaagggcgtggccatgccgcgcctggagcccttcgccgccgggcaagtg
ttcaaccacagccacacgcagcaggtcctggtgctgcccgccaccgacgaccacatcatg
gaggtcaacgccacatga
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