Cyclopterus lumpus (lumpfish): 117750149
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Entry
117750149 CDS
T09199
Symbol
rab5b
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04137
Mitophagy - animal
clum04144
Endocytosis
clum04145
Phagosome
clum04148
Efferocytosis
clum05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117750149 (rab5b)
04145 Phagosome
117750149 (rab5b)
04137 Mitophagy - animal
117750149 (rab5b)
04148 Efferocytosis
117750149 (rab5b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
117750149 (rab5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117750149 (rab5b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clum04147
]
117750149 (rab5b)
04031 GTP-binding proteins [BR:
clum04031
]
117750149 (rab5b)
Membrane trafficking [BR:
clum04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
117750149 (rab5b)
Endosome - Lysosome transport
117750149 (rab5b)
Exosome [BR:
clum04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
117750149 (rab5b)
Exosomal proteins of other body fluids (saliva and urine)
117750149 (rab5b)
Exosomal proteins of colorectal cancer cells
117750149 (rab5b)
Exosomal proteins of melanoma cells
117750149 (rab5b)
GTP-binding proteins [BR:
clum04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
117750149 (rab5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
MMR_HSR1
RsgA_GTPase
SDR-like
AAA_16
B12-binding
Motif
Other DBs
NCBI-GeneID:
117750149
NCBI-ProteinID:
XP_034417050
Ensembl:
ENSCLMG00005017699
UniProt:
A0A8C3A5V4
LinkDB
All DBs
Position
21:complement(18600268..18604594)
Genome browser
AA seq
216 aa
AA seq
DB search
MSSRGSGGRSNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLA
QSVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQ
RQASPNIVIALAGNKADLAERRLVEYEDAQTYAEDTGLLFMETSAKTAMNVNELFLAIAK
KMPKTDTQNPTHAARHRGVNLQDPDAHSTRACCGGN
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgagctccagagggagtggaggccgctccaacggcacactaccacagaccaagatctgc
cagttcaagttggtgctgctgggcgacatggccgtgggcaagtccagcctggtgctgcgc
ttcgtcaaaggccagttcgacgagttccaggagacgactatcggagctgcgttcctggct
cagtcggtgtgtctcgatgacaccacagtaaagtttgagatctgggacaccgcaggacag
gagcgataccacagcctggctcccatgtactaccgcggcgctcaggccgccattgtcgtc
tttgacatcaccaagccggagacctttgagagagccaaggcctgggtgaaggagctgcag
aggcaggccagtccgaacattgttattgctctggccgggaacaaggccgacctggcggag
aggagacttgtggagtatgaggacgcccagacgtatgctgaagacaccggcttgctcttc
atggagacctctgctaagacggccatgaacgtcaacgagctcttcctggccatcgcaaaa
aagatgccaaaaacagacacccagaaccctacacatgcagcgcgacaccggggggtcaac
ctccaggacccagacgcccactccacccgagcctgctgtggtgggaactag
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