Cyclopterus lumpus (lumpfish): 117750234
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Entry
117750234 CDS
T09199
Symbol
tnfsf13b
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04060
Cytokine-cytokine receptor interaction
clum04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
117750234 (tnfsf13b)
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
117750234 (tnfsf13b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
clum04052
]
117750234 (tnfsf13b)
04090 CD molecules [BR:
clum04090
]
117750234 (tnfsf13b)
Cytokines and neuropeptides [BR:
clum04052
]
Cytokines
Tumor necrosis fators
117750234 (tnfsf13b)
CD molecules [BR:
clum04090
]
Proteins
117750234 (tnfsf13b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
Motif
Other DBs
NCBI-GeneID:
117750234
NCBI-ProteinID:
XP_034417237
Ensembl:
ENSCLMG00005013951
UniProt:
A0A8C3G209
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All DBs
Position
21:complement(8498838..8502030)
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AA seq
254 aa
AA seq
DB search
MAGLADVKPGTGPRTGEGRLSWPVFLLTLAAVTSSSLSALSLYQLVALRAEVEGLKSEVG
RRREEGREALHASQTENISRRSSQESLHQPGFPIRKKRFVSGSETSVSQPCLQLLANNSR
KTFQKEYNSEPHTGIPWQAGLRRGSALEADGDSMLVMEEGFYFVYSQVYYMDSTFAMGHV
LIRRKRNVVGDEPQYVVLFRCIQNMNPVHPYNTCYTGGIVKLEVGDHLELLIPRPTAAVS
LYGDTTFLGAVKLA
NT seq
765 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtttggcagatgtgaagccggggaccggaccaaggacaggtgaagggaggctg
tcctggccagttttcctgctgacgctggctgctgtcacctcctcctctctttcagcgttg
tccctgtaccaactggtggccctcagggccgaggtcgagggactcaagtcagaggtcggt
cgcaggagagaagagggacgagaggctctgcatgcaagccagactgagaatatcagtagg
agaagcagccaagagtccctgcaccaacctgggtttccgataagaaagaaaaggtttgtc
tctggatcagagacatcagtttcccagccttgcctgcagttgttggcaaacaatagcagg
aaaaccttccagaaagaatataactcggagccgcacacgggtatcccctggcaggccggg
ctgaggagaggctcggccctggaggcggacggagacagcatgctggtcatggaggagggc
ttctacttcgtgtacagtcaggtctactacatggacagcacctttgctatgggtcacgtg
ttgatccggaggaagaggaatgtggtgggagacgagccccagtatgtggtcctgttccgc
tgcatccagaacatgaaccccgtccacccttacaacacctgctacacgggaggcatcgtg
aagctggaggtcggggaccacttggagctgctgatcccgcgccccacagccgccgtgtcc
ctgtacggagacaccaccttcctgggggccgtcaaactggcttga
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