Cyclopterus lumpus (lumpfish): 117750242
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Entry
117750242 CDS
T09199
Symbol
usp9
Name
(RefSeq) ubiquitin specific peptidase 9 isoform X1
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
clum01002
]
117750242 (usp9)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clum04121
]
117750242 (usp9)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
117750242 (usp9)
Peptidases and inhibitors [BR:
clum01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
117750242 (usp9)
Ubiquitin system [BR:
clum04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
117750242 (usp9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
DUF3517
UCH
UCH_UBL1
UCH_1
FAST_1
Vps23_core
Motif
Other DBs
NCBI-GeneID:
117750242
NCBI-ProteinID:
XP_034417250
Ensembl:
ENSCLMG00005010659
LinkDB
All DBs
Position
21:complement(21156506..21189726)
Genome browser
AA seq
2647 aa
AA seq
DB search
MTATTRGSPVGGNDSQGQGQAPDAQSQPPLSQNQTSSPNSSNENSPVSPPDEQAQGDGPP
QLEEEEPAFPHTDLAKLDDMINRPRWVVPVLPKGELEVLLEAAIDLSKKGLDVKCEACQR
FFRDGLTISFTKILTDEAVSGWKFEIHRCIINNTHRLVELCVAKLSQDWFPLLELLAMAT
NPHCKFHIYNGTRPSETVPAGAQMADDELFARPPDPRSPKGWLVDLINKFGTLNGFQMLH
DRFMSGQALNVQIIAALIKPFGQCYEFLTLHTVKKYFLPVIEMVPQFLENLTDEELKKEA
KNEAKNDALSMIIKSLKNLASRVPGQEETVKNLEIFRLKMILRLLQISSFNGKMNALNEV
NKVISSVSYYTHRHNPEEEEWLTAERMAEWIQQNHILSIVLRDSLHQPQYVEKLEKILRF
VIKEKALTMQDLDNIWAAQAGKHEAIVKNVHDLLAKLAWDFSPEQLDHLFDCFKASWTNA
SKKQREKLLELIRRLAEDDKDGVMAHKVLNLLWNLAHSDDVPVDIMDQALSAHIKILDYS
CSQDRDTQKIQWIDRFIEELRTNDKWVIPALKQIREICSLFGEAPQNLRKKMPINIQTNL
VGQTQRSPHVFYRHDLINQLQHNHALVTLVAENLSAYMETMRQFSKEEQAEFDPQTVRPG
SRYSHVQEVQERLNFLRFLLKDGQLWLCAPQAKQIWKCLAENAVFLCDREACFKWYSKLM
GDEPDLDPDINKDFFENNVLQLDPSLLTENGMKCFERFFKAVNCREGKLVAKRRAYMMDD
LELIGLDYLWRVVIQGSDDIASRAIDLLKEIYTNLGPKLQVNQVEIHEDFIQSCFDRLKA
SYDTLCVLDGDKDSINCARQEAIRMVRVLTVLKEYINECDSDYHEERTILPMSRAFRGKH
ITLIVRFPNQGRQVDDLDIWSHTNDTIGSVRRGILNRIKANAAHTKIELFIGGEVVDPAD
DRKLIGQLNLKDKTLITAKLTQVSANMPSSPDSSSDSSTGSPGNHGNHYSDGPNPEVESC
LPGVIMSLHLRYISFLWQVADLGCNLNMPLLRDGARVLMKLMPPDNTTVENLRAVCLDHA
KLGENSLSPSLDSRFFGPSPSQVLYLIEVVYALLMPASATLGEDASDFQYNFLKSGGLPL
VLSMLTRNNFLPSADMETRRGAYLNALKIAKLLLTAVGFGHVKAVAEACQPNAEGNIPVS
PINQATHDQALVLQSALQNIPNPASECMLRNVAIRLAQQISDEVTENNFFQASKYIPDIC
VIRAVQKIVWASGCGTVQLVFSSNEEISKIYEKTNAAKEPDGEDEQVCCEALEVMTLCFA
LMPTALDTLSKEKAWQTFIIDLLLHCHSKSVRQMAQEQFFLMATRCCMGHRPLLFFITLL
FTVLGSTAKERAKHAGDYFTLLRHLLNYAYNSNINLPNAEVLLNNEIDWLKRIRDEVKRT
GETGVEETILEGHLGVTKELLAFQTPEKKYYIGCEKGGANLIKELIDDFIFPASNVYLQY
MKSGEFPTEQAIPVCSTPASINAGFELLVALAVGCVRNLKKMVDTLTDMYYLGCETLTEW
EYLPPVGPRPNKGFVGLKNAGATCYMNSVIQQLYMIPPIRNGILAIEGTGTDVDDDMSGD
EKQENESNVDPRDEVFSYHHQFDDKPSSKSEDRKEYNIGVLRHLQVIFGHLAASRLQYYV
PRGFWKQFRLWGEPVNLREQHDALEFFNSLVDSLDEALKALGHPAMLSKVLGGSFADQKI
CQGCPHRYECEESFTTLNVDIRNHQNLLDSMEQYVKGDLLEGANAYHCEKCNKKVDTVKR
LLIKKLPPVLAIQLKRFDYDWERECAIKFNDYFEFPRELDMEPYTVAGVAKLEGDDVNPE
NQVIQQNEPSEPTPPGSSKYRLVGVLVHSGQASGGHYYSYIIQRNGGDGEKNRWYKFDDG
DVTECKMDDEEEMKNQCFGGEYMGEVFDHMMKRMSYRRQKRWWNAYILFYERMDSLDKDS
ELVKYISELTISSTKPHQVKMPGVIECSVRKQNVQFMHNRMQYSLEYFQFIKKLLTCNSV
YLNPPPGQDHLLPEAEEIAMISAQLAARFLFSTGFHTKKVVRGPASDWYDALCILLRHSK
NVRYWFAHKVLFAYPNRFSEYLLECPSAEVRGAFAKLIVFIAHFSLQDGPCPSPTASPGP
STQGSDNLSLSDHLLRAVLNLLRREVSEHGRHLQQYFNLFVMYANLGLAEKTQLLKLNVP
ATFMLVALDEGPGPPIKYQYAELGKLYTVVSQLVRCCDVSSRMQSSINGNPPLPNPYGDT
NLTTPVMPVQQLVAEILFVRTSYVKKIIEDCSNSEETVKLLRFSCWENPQFSSTVLSELL
WQVAYSYTYELRPYLDLLLQILLIEDSWQTHRIHNVLKGIPDDRDGLFDTIQRSKNHYQK
RAYQCIKCMVALFSNCSVAYQILQSNGDLKRKWTWAVEWLGDELERRPYTGNPQYTYNNW
SPPVQSNETSNGYFLERSHSARMTLAKACELCPEELKCTQGSPGKEPDEQEAPDDQDSSP
PEDTSLYPHSPGTTQFQQNNHPHGQPYTGPAAQHMNNPQRPGPASAPTPGPTQTSPSPSP
GPGPTPGPGPRAQENWESSEEVAQAPTETPTLVPTEAPTQVPVQAPAQAPAPTPSTSTTP
APAPPKE
NT seq
7944 nt
NT seq
+upstream
nt +downstream
nt
atgacggccaccacacgtggctctccggtggggggcaacgacagtcagggccagggccag
gcacctgacgctcaaagccaacccccattgtcacagaaccagacatcatctccaaactca
tctaatgagaactctccagtgagcccaccagatgagcaggcccagggggatggaccccct
cagctggaagaggaggagcccgccttccctcacactgacctagccaagctggatgatatg
atcaacaggcctcgttgggtcgttccagttttgccaaaaggagagttagaagtcctcttg
gaagctgctattgacctgagtaaaaaaggactggatgtgaagtgtgaggcttgtcagaga
tttttccgagatggtctgaccatctccttcacaaagatcctgacagacgaggcagtcagt
ggctggaagtttgagattcataggtgtatcatcaataacacacaccggttggtggagctg
tgtgttgccaagctctctcaggactggttccctctactggagctactggccatggccacc
aaccctcactgcaagttccacatctacaacggcacacggccctctgagactgtccccgct
ggagcacagatggccgatgacgagctcttcgcccgaccaccggacccgcgctctcctaag
ggctggttggtggacttaataaacaaatttggcacgttaaacgggtttcaaatgttgcac
gatcgcttcatgagcggccaagcactgaacgtccagatcatcgctgcacttatcaagcct
tttggccagtgttacgagttcctcacattgcacacggtaaagaagtacttccttccagtc
atcgagatggttccccagtttctagagaacctcacggatgaggagctgaagaaagaggcc
aagaatgaagccaaaaacgacgcactgtccatgataatcaagtctctgaagaatctggct
tctcgcgtaccagggcaggaggagaccgtgaagaatttagagatttttagattaaaaatg
attcttaggttattgcaaatttcttcttttaacggcaaaatgaatgcactaaacgaagtc
aacaaggtgatctccagtgtgtcctactacactcatcggcataaccctgaagaggaggag
tggctgactgcggagcgcatggcggagtggatccagcagaaccacatcctgtccattgtg
ctgagggacagtttgcatcagccgcagtacgtagagaaactggaaaagatcctccgcttc
gttatcaaagaaaaagctcttacaatgcaggatctggacaacatctgggcggcacaggcc
ggtaagcatgaggccatcgtgaagaacgtccacgacctcctggccaagctggcgtgggac
ttctcacccgagcagctcgatcacctttttgactgtttcaaggcaagctggaccaacgcc
agcaagaagcagcgggaaaaactgctggaactcatccggcgcttggccgaggacgataag
gatggggtgatggcccacaaggtcctcaacctgctgtggaacttggcgcacagcgatgac
gtgcctgtagacatcatggaccaggcacttagtgctcacatcaaaatattagattacagt
tgctcacaggacagagacacacagaagattcagtggatagatcgcttcatagaggagcta
cgaaccaatgacaaatgggtgatccctgccctgaagcaaatcagagaaatctgtagcctc
tttggagaagcccctcaaaaccttagaaagaaaatgccaattaacatacaaacgaactta
gtgggtcaaactcagcgaagtcctcatgtgttttaccgccacgacctgatcaaccagctg
cagcataaccacgctctggtcaccctggtggccgagaacctctcggcctacatggagacc
atgaggcagttctccaaagaagaacaggctgagtttgaccctcagacggtcagaccagga
agccgctacagccacgtgcaggaagtacaggaacgactcaacttcctgaggttcctgcta
aaagacggtcagctgtggctttgtgcccctcaggccaaacagatctggaagtgtctggct
gagaatgcagtgtttctttgcgaccgtgaggcctgcttcaaatggtactccaagctgatg
ggtgatgaaccagacctggacccagacatcaataaggacttttttgagaacaacgttctg
cagttggacccgtccctgctgacggagaatggcatgaaatgcttcgaaaggttcttcaag
gctgtcaactgcagggagggcaagctggtggcaaagcgcagggcctacatgatggatgac
ctggaacttatcggcttggactacctctggagggtggtaattcaaggaagcgacgatatc
gccagccgagccatagacctgctgaaagagatctacaccaacctcggaccaaaactacaa
gtcaatcaggttgaaattcatgaagatttcatccagtcctgttttgaccgcctgaaggcg
tcctacgacacgctgtgtgtgttagatggagacaaagacagcatcaactgcgcccgtcag
gaggctatccgcatggtgcgagttctcaccgtactcaaagagtacatcaacgagtgtgac
agcgattaccacgaggagaggactatactgcctatgtcaagagccttccgagggaagcat
atcacattgatcgtccgcttccccaaccaggggcgtcaggtggatgacttggacatctgg
tcacacaccaatgacacaatcggttcggtccggcgtggcatcctcaacaggatcaaagcc
aatgccgcgcacaccaagattgagctcttcattggtggagaggttgttgacccagctgat
gacaggaagctgattgggcagctcaatttgaaggacaaaacgctgatcacggccaagctg
acccaggtgagtgccaacatgccttcaagcccagacagctcatctgactcatccactggc
tcccctggtaaccacggcaaccactacagcgatggccctaaccctgaagtggagagctgt
cttcctggtgtgatcatgtcgctgcatctgcgatacatctccttcctgtggcaggtggcc
gacctgggctgcaacctcaacatgccactactcagagatggagctcgagttctcatgaaa
ctcatgccaccagacaacaccaccgtggagaatctgcgagctgtgtgtctggaccatgcc
aagctcggtgagaacagcctcagtccctcactggactcgcgcttcttcggaccctcaccc
tcacaagtgctctacctcattgaggttgtttatgctttgctgatgccagccagtgccact
ctgggcgaggacgccagcgacttccagtacaacttcttgaagagcggtgggctgcccctg
gtgttgagcatgctcaccaggaacaacttcctcccttcagcggacatggagacacgccgc
ggtgcttacctcaatgcgctaaagatcgccaagctcctcctcaccgccgtaggctttggg
catgtgaaggccgtggccgaggcctgccagcccaatgccgaaggaaatattcctgtctca
ccgatcaatcaggccactcatgaccaggccctggtcctccagagtgccctgcaaaacatc
cctaacccggcctcagaatgcatgctgcgcaacgtagccatccgcttagcccaacagatc
tctgatgaggtcacagaaaataatttcttccaggcatcgaagtacatcccagacatctgt
gtgatccgagcggtgcagaaaatagtgtgggcatcaggctgtggcacagtgcagctcgtc
ttcagttcaaatgaagaaatcagcaagatatacgagaagacaaatgcagctaaggagcca
gatggggaagatgagcaggtgtgttgcgaggccctggaggtgatgacactgtgtttcgcc
ctcatgcccacggctctggacacactcagcaaggagaaggcatggcagaccttcattatt
gacttgctgctacactgccacagcaaatctgtgcgtcaaatggcccaggagcagtttttc
ctgatggcaactcggtgctgtatgggccatcgacccctcctcttctttatcaccctcctc
ttcaccgtgctagggagtacggccaaggagagagccaaacacgctggagactacttcacc
ttactcagacaccttctgaactatgcgtataacagcaacatcaacctgccaaatgctgag
gtgctgctcaacaacgagatcgactggctgaaacggatcagggatgaggttaaaaggacg
ggggagaccggtgtggaggagaccatcctggagggacaccttggggttaccaaagagctt
ctggccttccagacaccagagaagaagtattacattggctgcgagaaaggaggagctaac
ctcatcaaggagctgatcgacgacttcatcttcccggcatctaatgtgtacctgcagtac
atgaagagtggggagttccccacagagcaggccatcccagtgtgcagcacccccgcttcc
atcaacgctggctttgagctcctggttgcactggccgtcggatgtgtccgcaacctcaag
aaaatggtcgacaccctgactgacatgtactacttgggttgcgagacgctgacggaatgg
gagtacctgcctccggtggggccgcggcccaacaaaggcttcgtgggtttgaagaatgcc
ggagccacctgttatatgaactccgtcattcagcagctgtacatgatccctccgatacgc
aatggcatcctggccattgagggcacaggcaccgatgtggatgacgacatgtcgggggat
gagaagcaagagaacgagagtaacgttgatcctcgtgatgaggtgttcagctaccaccat
cagtttgacgataaaccctccagcaagtcagaggacagaaaggagtacaatatcggggta
cttcgccacctgcaggtcatttttggacacctggctgcgtccagacttcagtactatgtc
cccaggggattctggaaacagttcaggttatggggtgagcctgtgaatctgcgggagcag
cacgatgccctggagtttttcaactccttggtggacagtctggacgaagctctgaaagcc
ctgggccaccccgccatgctgagcaaggtgctcggagggtccttcgccgaccagaagatc
tgtcagggatgcccccacaggtacgagtgcgaggagtcgttcacaactctcaatgtggac
atcaggaaccaccagaacctgttggactccatggagcagtatgtcaagggagatcttctt
gagggagctaacgcctaccactgtgagaagtgtaataagaaggtggacacagtgaagcgc
ctgctgataaagaagctgccgccagtcctggccatccagctgaagcgctttgactacgac
tgggagagggagtgcgccatcaagttcaacgactactttgagttccccagggagctggac
atggagccgtacacggtggcgggcgtggcgaagctcgagggcgacgacgtcaaccccgag
aaccaagtgatccaacagaacgaaccctccgagcccacgcctcccggcagctccaagtac
cgcctggttggagtgctggtccactcaggccaggccagtggcggacactactattcctac
ataatccagaggaacgggggcgacggtgagaagaaccgctggtacaagttcgacgacggc
gacgtgacggagtgcaagatggacgacgaggaggagatgaagaaccagtgcttcggaggg
gaatacatgggcgaggtgtttgaccatatgatgaagaggatgtcgtaccggaggcagaag
cgctggtggaacgcctacatcctattctatgagcgcatggactcactggacaaggacagc
gagcttgtcaaatacatctctgagttgaccatctcctccaccaagccgcatcaggtcaag
atgccaggtgtcatcgagtgcagcgtccgcaagcagaacgtccaattcatgcacaaccga
atgcaatacagcctggaatatttccagttcattaagaaacttctgacctgtaacagtgtc
tatttaaaccctcctccaggacaagaccatcttctgccagaggcagaggagattgctatg
ataagtgctcagctggctgctaggttcctcttcagcacaggttttcacaccaagaaagta
gtacggggtcctgccagcgactggtatgatgccctctgcatcctgctgagacacagtaag
aatgtacgctattggtttgcacacaaggtcctgtttgcttaccccaaccggttctcggag
tacctgctcgagtgcccgagtgccgaggtccgcggcgcattcgccaagctcatagtcttc
atcgctcacttctcgctgcaggacggcccgtgtccctcccccaccgcctcgcccgggccc
tccactcagggctctgataacctcagtctaagtgaccacctgttgagagccgtactcaac
ttgctcagaagagaggtgtctgaacacggccgtcacctgcagcagtacttcaacctcttc
gtcatgtatgccaatctgggcctggcagaaaagacccagctgttgaagctgaacgtccct
gctactttcatgctggtcgctctggacgagggtcccggccctcccatcaagtatcagtac
gctgagctgggcaagctctacaccgtggtctcccagctggttcgttgctgtgacgtctcc
tcgcgcatgcagtcttccattaatggtaacccacccctccccaacccgtacggtgacacc
aacctgacgaccccggtgatgccggtgcagcagctggtggcagagatcttgttcgtgagg
accagctacgtgaagaagatcatcgaggactgcagcaactcagaggagacggtgaagctg
ctccgcttcagctgctgggagaacccccagttctcctccaccgtgctcagtgagctgctc
tggcaggtggcatactcctacacctatgagctgaggccttacctggacttgctgctacag
atcctgctcatcgaggactcttggcagacacacaggatccacaatgtgctgaagggcatt
cccgatgacagagatgggctctttgacaccatccagcgctccaagaaccactaccagaaa
cgggcctaccagtgcatcaagtgcatggtggccctctttagcaactgctcggtggcttac
caaatcctacagagcaatggtgacctgaaacggaagtggacgtgggcagtggagtggttg
ggggacgagctggagaggaggccgtacacggggaacccccagtacacctacaacaactgg
tcccccccagttcagagcaacgagacctccaacggctatttcctggagcgttcgcacagc
gcacgaatgacacttgccaaggcctgtgaactttgtcccgaggagctcaagtgtactcag
ggaagcccggggaaggagccggacgaacaggaagcgccggacgatcaggactcgtcacct
cccgaggacacctccctgtacccgcactctcctggaaccacacagtttcagcagaacaac
cacccccatggacagccgtacaccgggcctgctgcgcagcacatgaacaaccctcagcgt
cctggtcctgcctctgccccgactccgggccccacccagacctctccatccccatcccct
ggccctggtccgactcccggtccaggcccgcgagcacaagagaactgggagagctccgag
gaggtcgctcaggccccgaccgagaccccgaccctggtcccgaccgaggccccgacccag
gttccggtgcaggccccggcgcaggccccggcccccacaccctccacctccacgacccca
gcgcctgccccacctaaggagtaa
DBGET
integrated database retrieval system
