Cyclopterus lumpus (lumpfish): 117750259
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Entry
117750259 CDS
T09199
Symbol
hdac4
Name
(RefSeq) LOW QUALITY PROTEIN: histone deacetylase 4
KO
K11406
histone deacetylase 4/5 [EC:
3.5.1.98
]
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
117750259 (hdac4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117750259 (hdac4)
Enzymes [BR:
clum01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
117750259 (hdac4)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
117750259 (hdac4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
HDAC4_Gln
Motif
Other DBs
NCBI-GeneID:
117750259
NCBI-ProteinID:
XP_034417288
Ensembl:
ENSCLMG00005018099
LinkDB
All DBs
Position
21:19813492..19916864
Genome browser
AA seq
1113 aa
AA seq
DB search
MSSHSRSGGLTSNEHPVELLKPAVLNHFVDVSSAVLPMQVPPXTTAILPMDLRVVDHPHH
HHHLHHHQQQPTFGLGPQPHPTAPVSAACPASSEPGRGSVINQPEQQLQQELVTLKHKQQ
LQRQLLIAEFQRQHEQLSRQHEVQLQEHVKHQQDLLALKHQQELLEHQRKMEQQRLEQEM
EKQQREHKLLQLKNKERGQESAVASTEVKMRLQEFVLNKKKALAQRSINHCLPSDPRFWY
GKTQHSSLDQSSPPQTALSAYTHPMLGTYDSKDDFPLRKTASEPNLKLRSRLKQKVTERR
SSPLLRRKDGPITTAKKRSLDMAESACNSAPGSGPSSPNNSSSNIPSENGVTISSSPGEA
SLLQRLAAREGSVSQLSLYTSPSLPNITLGLPATGPASAMVSGHQDGESRLALPALQGIP
LTPPFLPTAHLPSYLASSALDRDGAGGGPAGHNPLLQHMVLLEQSHNPMVGLAGLPLSSP
SVSKLARGHRPLGRTQSAPLPQQQCGQAQALQQLVVQQQHQQFLEKHKQQFQQQQHIINK
IMSKPGDQVSAAGSSASGPARQHQSHPEETEEELREHQGLSLSCSSSSAQETGLLRGLVI
KQEPPDPQEQQEEREKRQVEQEFLFRQQALLLEQQRIHQLRNYQASMEAAGLLVSFAGHR
PLSRAQSSPASASFPMVVQEPPVKPRFTTGLVYDSLMQKHQCMCGNTTSHPEHAGRIQSI
WSRLQETGLRAHCECIRGRKASLEELQTVHSEAHVLLYGTNPLRQKLDCSVSPMFVRLPC
GGIGVDNDTIWNEVHSSSAARLAVGSVVELVFKVASGELKNGFAVVRPPGHHAEESTPMG
FCYFNSVAIAAKLLQQRLNVSKVLIVDWDVHHGNGTQQAFYADPSILYLSLHRYDDGNFF
PGSGAPDEVGSGAGEGFNVNMAFTGGLEPPMSDAEYLAAFRTVVMPIANEFAPDVVLVSS
GFDAVDGHAPPLGGYKLTAKCFGYLTRQLMGLAGGRLVLALEGGHDLTAICDASEACVSA
LLGNELDPIPDEVLQQIPNANAVHSMEKVLEIHSKYWRSLQRSASTLGCSLSEALRRDAE
EAETVSAMASLSVANKLVGKRAEEEPMEEEATM
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgagctctcacagtcgctcaggtggcttgaccagcaacgagcatcccgtggaacttctc
aaaccggctgtactcaatcatttcgtggacgtgagctcggcagtgctgcccatgcaggtg
cccccanccaccacagccatccttccaatggacctgcgcgtagtggaccacccccaccac
catcaccacctccaccaccaccagcagcagcccacctttggcctgggtccccaaccccac
cctacagcgccagtctccgctgcttgccccgcgtcctccgagccaggccgcggctcagtc
attaatcagccggagcaacagctgcagcaggagttggtgacgctcaaacacaagcagcag
ctccagcggcagctcctgatcgccgagttccagaggcagcacgagcagctgtcgcggcag
catgaagtccagctgcaggagcatgtcaagcaccagcaggatttactggcgctcaagcac
caacaggagctgttggagcaccagaggaagatggagcagcagcgtctggagcaggagatg
gagaagcagcagcgggaacacaaactcctgcagctcaaaaacaaggagagggggcaggag
agtgcagtcgccagcacagaggttaagatgcgacttcaggagtttgtcctgaacaagaag
aaagcgctggctcagcgaagcattaaccactgtctgcccagcgacccacgcttttggtat
ggaaaaacccagcacagctctttggaccagagctctcctccccaaacagcattgtcagcg
tacacccacccgatgctgggcacatacgactcaaaagacgacttccctctccgaaaaaca
gcctcagagcccaacctgaagcttcgttcccggctaaagcagaaggtgacggagcgccgc
agcagccctcttctccgcaggaaagatggccccatcactaccgccaagaagcgttcccta
gacatggctgagtccgcatgcaacagcgcaccgggctcaggtcccagctcccccaacaac
agctccagtaacatccccagtgagaacggggtcaccatctccagcagcccaggagaggcc
tccctgcttcagaggttggctgcaagggagggttcagtcagccagctgtctctctacact
tccccttcactgcccaacatcaccctgggactgccagccacagggccggccagcgctatg
gtgtcaggacaccaagatggtgagagtcgtctggcgttacccgcgctacaggggattcct
ctgacccccccattcctgcccacggcccacctgccctcctacttggcgtcttcggctctg
gacagggacggggccggagggggcccggctggtcacaacccccttctccaacacatggtg
ctactagagcagagccacaatccaatggttggtctggctggcctcccgctgtcatcaccc
tccgtctccaaacttgctcgcggccaccgtccccttgggagaacccagtcggcccctctg
ccccagcagcagtgtggacaggcccaggccctgcagcagctggtggtccagcagcaacac
cagcagttcctggagaaacacaaacaacagttccagcagcagcagcacatcatcaacaag
atcatgtccaagcccggtgatcaggtctcagcagcgggctccagcgcctcggggccggcc
aggcagcaccagagtcacccggaggagacggaggaggaactcagggagcaccaggggctc
tccctttcatgctcgtcgtcgtccgcccaggagacggggcttctgcgcgggctggtcatc
aagcaggagcccccagacccccaggagcagcaggaggagagagagaagagacaagtcgag
caggagtttctgttccgacagcaggctctgctgttagagcagcagcggatccaccagctg
aggaactaccaagcctccatggaagcagccgggttattggtcagcttcgctggacaccgt
cccctctccagggctcagtcgtccccggcctcggcctccttccccatggtagttcaggag
ccgcccgtcaagccccgattcacaacaggtctggtgtatgactctttgatgcagaagcac
cagtgcatgtgcggaaacaccaccagccacccagagcacgctggccgcatccagagtatc
tggtcccgactacaggaaacgggcctcagggctcactgcgagtgtatccgcggcaggaag
gcctcgctggaggagttacagacggtccactccgaagcccacgtcctgctctacggaacc
aacccgctgcggcagaaactggactgttcagtgagccccatgtttgtgaggttaccgtgc
ggaggcatcggggtggacaacgacaccatttggaacgaggtccattcatccagcgcggct
cgtctggccgtcggctcggtggtggagctggtcttcaaagtagcctcgggagaactgaag
aatggttttgctgtagtccgaccacctggacaccacgctgaggagagcacgccgatgggc
ttctgttacttcaactcagtcgccatagcagccaagctgctgcagcagagactcaatgtc
agtaaagtcctcatcgtggactgggatgttcaccatggcaatggcacccagcaggccttc
tacgcagaccccagcattctctacctgtcgctgcatcgctacgatgacgggaatttcttc
cccggcagtggagcgcctgacgaggtgggcagtggggcaggcgagggcttcaatgtgaac
atggcctttactggaggactggaacctcccatgagcgatgcagagtacctggctgcattt
agaacggtggttatgcctattgccaacgagtttgccccagacgtggttctggtatcttcg
ggctttgatgcggtcgacggacatgctccacccctgggtggatacaagctgacagccaaa
tgctttggctacctgaccaggcagctgatgggtctggcaggcggccggttggtgcttgcc
ctggagggaggtcacgacctcacggccatatgtgatgcctctgaagcctgcgtctctgct
ctgcttggcaatgagttggaccccattcctgacgaggtgctgcaacagataccgaatgcc
aacgctgtccactcgatggagaaagttcttgaaatacacagtaaatactggcgctcgctg
cagcgctccgcctccaccctcggctgctcgttgagcgaagcccttcggcgtgacgcagag
gaggctgagaccgtctccgccatggcctcgttgtccgtcgccaacaagcttgttggaaag
agggctgaagaggaacccatggaagaggaagctaccatgtaa
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integrated database retrieval system
