Cyclopterus lumpus (lumpfish): 117750291
Help
Entry
117750291 CDS
T09199
Symbol
cwc22
Name
(RefSeq) pre-mRNA-splicing factor CWC22 homolog
KO
K13100
pre-mRNA-splicing factor CWC22
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117750291 (cwc22)
Spliceosome [BR:
clum03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
117750291 (cwc22)
Complex C
U4/U6.U5 tri-SnRNP related factors
117750291 (cwc22)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MA3
MIF4G
Cnd1
Motif
Other DBs
NCBI-GeneID:
117750291
NCBI-ProteinID:
XP_034417335
Ensembl:
ENSCLMG00005009404
UniProt:
A0A8C2XH08
LinkDB
All DBs
Position
21:complement(21018292..21031173)
Genome browser
AA seq
1052 aa
AA seq
DB search
MDSPGRSQSPSPAQKEQSGPPEDKSNPAAETPQQAESVERSPKEKSSPQASPAGRSPSRS
PASGSGASSSSDDSSSSDDEDEHHGALRKLRSSVAQIKRSKSKSVSRERDGSISKDRDRS
RSRERDRSWGRDRSRSRSRERDRSRSRGRDRSRSRGQDRSRSRERDRDRGRYDRGRYTRD
RYDDRRDDRDGRDRWTNRGAESDHRRRGHSGSPTTDREPVAAEGPPVKKKKEEIDPILTR
TGGAYIPPAKLRMMQQQITDKTSLAYQRMSWEALKKSINGLINKVNVSNIVHIIQELLQE
NIVRGRGLLSRSVLQAQAASPTFTHVYSAVVAIINSKFPQIGELILKRLILAFRRSYRRN
LKQQCLTASKFVAHLINQNVAHEVLCLEMLTLLLERPTDDSVEVAIAFLKECGLKLTEVS
PRGINAIFERLRNVLHESAIDKRVQYMIEVMFAIRKDGFKDHPVILEGLDLVDEGDQFTH
MLPLDDEYNTEELLNVFKMDPDFLESEEKYKTIKRDILDEGSSDSGEEGDGSDEEEDDEE
ENAEEGGDEKITIYDMTEVNLVAFRRTIYLAIQSSLDFEECAHKLIKMDFPDSQTKELCN
MILDCCAQQRTYEKFFGLLAGRFCLLKKEYMESFEGIFAEQYETIHRLETNKLRNVARLF
AHLLYTDSVPWSVLECVRMSEDTTTSSSRIFVKILFQELCAYMGLPRLNQRLKDPTLQPY
FEGLFPRDNPRNTRFAINFFTSIGLGGLTDELREHLKNAPKIIMTQNQEVESSDSSSSSD
SSSSESSSSSDSSSESDSSDSSSSSDEDSKQKKKKKRKEQSEEKNNKKKGEDKKKKNKKI
KNKKDKQSDKKRVERKNDDDHGDEKQARKDRKGLAREVEGHERAREVEGRERTREVEGRS
REVEGRERTREVEGRAREVEGRERAREVEGRAREVEGREMAGRAREAEGRERAREVEDRA
ATHRSRRDERAEEEEEEEEKEERRRSKMDFQGRQRDGVSERDRGRVRESERARDREPEEK
REGEKEREKPRERERNKENRDRNREREERRRR
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggactctccaggcagaagtcaaagtcccagtcctgcgcaaaaagaacaaagtggaccg
ccagaagacaagtccaatcccgcagcagagacgcctcaacaggccgaatcggttgaaaga
agccccaaagagaagtcatcccctcaagccagtcctgcagggcgttccccctccaggagt
cccgcctccgggagtggtgcctccagcagctcagacgacagcagcagcagtgatgatgag
gatgaacatcatggtgcattgaggaagttaaggagcagtgtagctcagatcaaaagatca
aaatccaagtctgtgtccagagaaagagacggatccatatccaaagaccgagacagatcg
aggtctagagagcgagacagatcctggggacgggacaggtccagatccagatctagagag
agagacagatcaagatccagaggacgagacaggtccaggtcaagaggacaagacagatcc
aggtccagagagagagaccgggaccggggtcgctacgacagaggacgctatacacgggat
cgctatgatgatcggcgtgacgatagggacgggcgtgaccggtggaccaatcggggtgcc
gagtcagatcacaggaggcgaggacactccggctcccctacaacagaccgggagccagtg
gcggcagaggggccgccggtcaagaagaagaaggaggagatcgacccgatcctgaccagg
acgggtggagcttacatcccccccgccaagctgcgcatgatgcagcagcaaatcactgac
aagaccagcctggcctatcagaggatgagctgggaggccctgaagaagtccatcaacggt
ctgatcaacaaagtcaacgtgtccaacatcgtccacataatccaggagctgctgcaggag
aacatcgtcaggggcaggggtctgctgtctcgctcggtgctgcaggctcaggcggcgtcg
ccgaccttcactcacgtttactctgccgtcgtcgccatcattaactccaagttccctcag
attggagagctgatcctcaaacgcctcatcctggccttcaggaggagctaccgccgcaac
ctcaagcaacaatgcttgacggcctcaaagtttgtggcacatctcatcaaccagaacgtg
gcccacgaggttctttgtctggagatgctcactctgctgttggagcgtccgactgacgac
agcgtggaggtcgccatcgccttcctgaaggagtgtggactcaaactgaccgaggtgtcc
ccgcgaggaatcaacgccatatttgagcgtctcaggaacgtccttcacgagtcggccatt
gataagagggtccagtacatgatcgaggtgatgtttgccatcaggaaggatggtttcaaa
gatcatccagtgatcctagagggcctggacctggtggatgagggagaccagttcacccac
atgctgccgctggatgacgagtacaacaccgaagaactcctcaatgtgtttaagatggac
ccagacttcctggagagcgaggagaaatacaaaaccattaaaagagatatcctggacgag
ggcagcagcgactcaggggaggagggcgatggcagcgacgaagaggaagacgatgaagaa
gagaacgcggaggagggaggagatgagaaaatcaccatctatgatatgacagaagtcaac
ctggttgcttttagaagaaccatctacctcgctatccagtccagtttggactttgaggag
tgcgctcacaagctgatcaagatggactttcctgacagccagacgaaggagctttgtaac
atgatcctggactgctgcgcccaacagagaacctacgagaagttctttggtctgctggcc
gggaggttctgtctgctgaagaaggagtatatggagagttttgaggggatttttgcggag
cagtacgaaaccattcaccggctggagaccaacaaactgaggaacgtggctcggctgttt
gctcacctgctctacacggactctgtgccctggagtgtgctggagtgcgtccggatgagc
gaggataccacaacgtcatccagcaggatctttgttaagatccttttccaggagctctgt
gcctacatgggcctccccagactcaaccagaggctcaaagacccgactctgcagccgtac
tttgaaggtctctttcctcgtgataatcccagaaatactcgctttgccatcaacttcttc
acctctatcggactgggaggcctgacggacgagttgagggaacatttgaagaatgctccc
aagataatcatgactcagaaccaggaagtggaatcctctgactcctcctcctcctcagac
tcctcttcgtctgagtcctcctcctcctcagactcctcgagtgaatcagattcctctgac
tccagcagcagctcagacgaggacagcaaacagaaaaagaagaagaagagaaaagaacaa
agcgaggagaagaacaacaagaagaagggggaggacaagaagaagaagaacaagaagatc
aagaacaagaaggacaaacagtcggacaagaagcgagtcgaacgcaagaacgacgatgac
cacggtgacgagaagcaggcgaggaaggacaggaaaggcctcgcacgtgaggtggagggg
catgagcgtgcacgtgaggtagaggggcgtgagcgtacacgtgaggtagaggggcgttca
cgtgaggtggaggggcgtgagcgtacacgtgaggtagaggggcgtgcacgtgaggtggag
gggcgtgagcgtgcacgtgaggtagaggggcgtgcacgtgaggtggaggggcgtgagatg
gcagggcgtgcacgtgaggcagaaggccgtgagcgcgcacgtgaggtagaggaccgtgcg
gctacccaccggagcagacgtgacgaaagggctgaggaggaggaagaagaggaggagaag
gaggaacggaggagaagcaaaatggactttcaaggccgacaaagagacggagtgagcgag
agagacagagggagggtcagagagagcgagcgagcgagggaccgagagcctgaggagaag
agagagggcgagaaggagcgagaaaagccgagggagagggagaggaataaagagaacaga
gacaggaaccgagagcgagaggagagaaggaggaggtga
DBGET
integrated database retrieval system
