Cyclopterus lumpus (lumpfish): 117750314
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Entry
117750314 CDS
T09199
Symbol
smarcal1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117750314 (smarcal1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117750314 (smarcal1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
DEAD
ERCC3_RAD25_C
Flavi_DEAD
AAA_34
Motif
Other DBs
NCBI-GeneID:
117750314
NCBI-ProteinID:
XP_034417359
Ensembl:
ENSCLMG00005020081
LinkDB
All DBs
Position
21:complement(12687537..12697408)
Genome browser
AA seq
926 aa
AA seq
DB search
MSNQLTVEQQRKIEENRRRALERRAQRLGQTTTTTSGNTQMSVGFSGASGPVHSSKQSGA
SDHAALARHRHPDTLGSASAREQFVSPKTDSTSFNNFKQSHKHQQPSITCNQIKQSTNTQ
IQIIDPLPQARSQHVSSPVLSIGGSSGAKPAHSKPNVPTNISGGANFPSNISGGAVPSFY
KQTSKPAKSSVAQLPSNSSTCNAVPAKKAAISIRGKCVPHTEGRFRVEVGYHAGLIAVFK
SISSKNYDPATKMWNFSLEDYQPLMKEAAAIASVSLRPLEGMEAVDVAEATSQACDDGVA
LGALLKLCNGWQKPGASLQGQCIMVSPTKFEVDIGYNVDVIAAFKQMPTKNYDMKTRKWS
FSLGDYKRLLDLLSGIAAVEVEPLPRAIVQTFFARFDGTEARSLDVPEADLSRIDPSLTC
SLMPFQRDGVNFAVSKQGRLLLADDMGLGKTVQAICIAAYYRNEWPLLVVAPSSVRFTWA
EAFRRWLPSLSPDSINVVVKAKDDLRSGLVNITSYDLLSRMDKLQLGNPFNVLIMDECHF
MKNMKTARCKAALPLLKAAKRVVLLSGTPAMSRPSELYTQILAVRPTLFPRFHEFGMRYC
NATQSTWGWDYSGSSNLGELRLLLDESLMLRRLKCDVLSQLPAKQRKVVTVTIDGVNTRI
KAALSAAAKQLANVHRNKMQDKEALLVFYNQTAEAKLQAIMEYITDMLECGREKFLVFAH
HKLVLDHITTELVKKNVCYIRIDGSTPSAERQQLCEKFQFLTKTCVAVLSITAANMGLTL
HAADLVVFAELFWNPGILVQAEDRVHRIGQTSNVNIHYLVAKGTADDHLWPMIQEKMNIL
EQVGLSESNLSDKAVNANFHSKDPNQRSIMEMFQRSFTEDDDIDEAILLEAANDWEDTPP
ENSSGPQHGAAGQSLSKNSTRDHFSR
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgtccaatcagctgactgtggagcagcagcgaaagattgaggaaaacaggcggagggcc
ttagagagaagagctcaaagactaggacagaccaccaccaccactagcggcaacacacag
atgtcagtcggcttcagcggcgcctcggggccggtacactcctccaaacagagcggtgcc
tcggatcatgctgccctggctcgtcacagacacccagacacactcggctcagcttctgca
cgggaacagtttgtttcacccaaaacagactcgacgagcttcaacaacttcaagcaaagc
cacaagcatcagcagccatccatcacttgcaaccaaatcaaacagagcacgaacacacag
atacaaatcattgacccacttcctcaggcaagaagtcaacatgtgagcagtcctgttttg
tctattggaggaagctctggtgcgaagccagctcattccaaacctaatgtccccaccaat
atctctggtggggctaacttcccctccaatatctctggtggtgcagttccttcattctac
aagcaaactagtaaacctgccaaaagctctgtggcacagcttccctccaattcatcaact
tgcaatgctgtacctgctaaaaaggctgccatctctatcagaggaaaatgtgtacctcac
acagagggccgcttcagggtagaagtgggctaccacgcagggttgattgctgttttcaaa
tccatctcctcaaagaactatgaccctgccacaaagatgtggaacttcagtctggaggac
tatcaaccgctaatgaaagaagcggctgctattgcctctgtgtctctgaggcctctggag
ggaatggaagcagtggatgttgcagaagccaccagccaagcttgcgatgatggtgtggca
ctgggagcactgctgaagctgtgtaacggctggcagaaacctggagccagtctgcagggc
cagtgcatcatggtgtctccgacaaagtttgaggttgacattggttacaacgtcgatgtc
attgcagcattcaagcagatgccaacaaagaactatgacatgaaaacaagaaagtggagc
ttttcactcggggattacaagagacttttggatctcctcagtgggatagcagcagtggag
gtggagcctctgcccagggcaatagtccagactttctttgccaggtttgacgggactgaa
gccaggtctttagacgtccctgaggcagacctctccaggatcgacccctcgctcacctgc
agcctcatgcccttccagagggacggagtaaattttgcagtgtctaaacaaggccgcctc
ctcctggctgatgacatgggcctgggaaagactgtgcaggccatctgtattgcagcctac
tacaggaatgagtggcccttgctcgtggtggctcccagctctgtacgattcacctgggcc
gaggccttcagacgctggctcccctccctgagtcctgacagcatcaacgtggtggtgaag
gccaaagacgatctgcggtctggtttggtcaacatcaccagctacgacctgctgagcagg
atggacaagctgcagctgggaaatcccttcaatgttctcatcatggatgagtgtcacttt
atgaagaacatgaagactgctcgttgtaaagcagccttacctttgctaaaggcagcaaag
agagtggttcttctgtctggcacccctgccatgtccagaccctctgagctctacacccag
attctggctgtcagaccgacactcttccctcgcttccatgagtttgggatgcgctactgc
aatgccacacagtcgacttgggggtgggactactctggctcatctaaccttggggagttg
agactgctccttgacgagtctctgatgttgcgccgcctcaagtgcgacgtcctctcccag
cttcctgctaaacaacgcaaggttgtcacagtgaccatagatggtgtcaacacccgcata
aaagctgctctgtccgctgctgccaagcagttggccaatgtacaccgcaataaaatgcaa
gataaagaagccctcctcgtcttttataaccagacagctgaagccaagctacaagccatt
atggagtacatcacagacatgcttgagtgtgggagggagaagtttctagtgttcgcccat
cataaattggtcctggatcatatcaccaccgaactggtcaaaaagaatgtctgttacatc
cgtattgatgggtccactccttcagctgaacggcagcagttgtgtgagaagttccagttc
ttgaccaagacctgtgtggctgtactatccatcaccgccgctaacatgggtctcaccctg
cacgctgctgacctggtggtcttcgctgagcttttctggaaccccgggattctcgttcag
gcggaggatagggtgcaccgtattggacaaaccagcaatgtgaacattcactacctggtt
gccaagggaactgctgatgaccacttgtggccaatgatccaggaaaaaatgaatatcttg
gagcaagtgggcctctctgagtccaacctctcagacaaagctgtgaatgccaactttcac
tctaaggaccccaaccagaggagcatcatggagatgttccagaggtctttcactgaagac
gacgacatagacgaagccatcctactggaggctgccaacgactgggaggacacgccgcct
gaaaacagttctggtccacaacacggcgcggccggacaaagcctcagcaaaaacagcacc
agggatcatttcagcagatga
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integrated database retrieval system
