KEGG   Cyclopterus lumpus (lumpfish): 117750436
Entry
117750436         CDS       T09199                                 
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
  KO
K09267  transcription factor SOX1/3/14/21 (SOX group B)
Organism
clum  Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:clum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:clum03000]
    117750436 (sox21b)
Transcription factors [BR:clum03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    117750436 (sox21b)
SSDB
Motif
Pfam: HMG_box HMG_box_2 SOXp HMG_WDHD1
Other DBs
NCBI-GeneID: 117750436
NCBI-ProteinID: XP_034417550
Ensembl: ENSCLMG00005008116
UniProt: A0A8C2XEH0
LinkDB
Position
21:complement(9808296..9810606)
AA seq 244 aa
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSVGSLSESI
IGHHDKAAAAAAAAAARVFFNPAMSNPYSFFDLGSKMTELSPHSFPYASPLGYPPGGSAA
FTGTGGGTHGHTHSHPSPGNPGYVIPCNCTGWPSAGLQPPLAYILLPGMGKPQLEPYPAY
AAAL
NT seq 735 nt   +upstreamnt  +downstreamnt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaacccgaaaatgcacaactccgagatcagcaag
agattaggagccgagtggaaacttctcacggagtccgagaagaggccgttcatcgacgaa
gccaaacgactgcgagcgatgcacatgaaggaacaccccgactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttctttccccgtgccctataatctc
ggggagcacgacgcactcaaagtcaatgggctttccgtgggatcactttccgagtccatc
atcggacaccacgacaaggcggcggcggctgcggcggccgcggctgcgagggtgttcttc
aacccggccatgtcgaacccctattcctttttcgacctgggatccaagatgactgagctt
tccccgcattcgtttccgtacgcgtctccgttgggctacccgccgggtggctccgcggct
ttcaccgggaccggcggtgggacgcacggccacactcactcacacccgtcccctggaaac
ccgggctacgtaatcccttgtaactgtacgggctggccctccgcaggactccagccgccc
ttagcatacatcctgctccccgggatgggaaaacctcaacttgaaccgtaccctgcatat
gcggcggcgttatga

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