Cyclopterus lumpus (lumpfish): 117750436
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Entry
117750436 CDS
T09199
Symbol
sox21b
Name
(RefSeq) transcription factor Sox-21-B
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117750436 (sox21b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
117750436 (sox21b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
117750436
NCBI-ProteinID:
XP_034417550
Ensembl:
ENSCLMG00005008116
UniProt:
A0A8C2XEH0
LinkDB
All DBs
Position
21:complement(9808296..9810606)
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AA seq
244 aa
AA seq
DB search
MSKPMDHVKRPMNAFMVWSRAQRRKMAQENPKMHNSEISKRLGAEWKLLTESEKRPFIDE
AKRLRAMHMKEHPDYKYRPRRKPKTLMKKDKFSFPVPYNLGEHDALKVNGLSVGSLSESI
IGHHDKAAAAAAAAAARVFFNPAMSNPYSFFDLGSKMTELSPHSFPYASPLGYPPGGSAA
FTGTGGGTHGHTHSHPSPGNPGYVIPCNCTGWPSAGLQPPLAYILLPGMGKPQLEPYPAY
AAAL
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaccaatggatcacgtcaaacgcccgatgaacgctttcatggtttggtccaga
gcccagcgcagaaaaatggctcaggagaacccgaaaatgcacaactccgagatcagcaag
agattaggagccgagtggaaacttctcacggagtccgagaagaggccgttcatcgacgaa
gccaaacgactgcgagcgatgcacatgaaggaacaccccgactataaatacagaccgagg
cggaagcccaagactctgatgaaaaaagataagttttctttccccgtgccctataatctc
ggggagcacgacgcactcaaagtcaatgggctttccgtgggatcactttccgagtccatc
atcggacaccacgacaaggcggcggcggctgcggcggccgcggctgcgagggtgttcttc
aacccggccatgtcgaacccctattcctttttcgacctgggatccaagatgactgagctt
tccccgcattcgtttccgtacgcgtctccgttgggctacccgccgggtggctccgcggct
ttcaccgggaccggcggtgggacgcacggccacactcactcacacccgtcccctggaaac
ccgggctacgtaatcccttgtaactgtacgggctggccctccgcaggactccagccgccc
ttagcatacatcctgctccccgggatgggaaaacctcaacttgaaccgtaccctgcatat
gcggcggcgttatga
DBGET
integrated database retrieval system