Cyclopterus lumpus (lumpfish): 117750474
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Entry
117750474 CDS
T09199
Symbol
si:dkey-230p4.1
Name
(RefSeq) trichohyalin
KO
K16464
centrosomal protein CEP250
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117750474 (si:dkey-230p4.1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
clum03037
]
117750474 (si:dkey-230p4.1)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
117750474 (si:dkey-230p4.1)
Cilium and associated proteins [BR:
clum03037
]
Other cilia and associated proteins
Other cilium assembly proteins
117750474 (si:dkey-230p4.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rootletin
AAA_15
Motif
Other DBs
NCBI-GeneID:
117750474
NCBI-ProteinID:
XP_034417601
LinkDB
All DBs
Position
21:complement(1838206..1870574)
Genome browser
AA seq
2692 aa
AA seq
DB search
MQSELLIGWHQEKAELTKEVCRLQEELAESRAEREELESRSRALNDRLYQSVSPSLALSL
QGEGEQREWKRRERDGREREARQALLIHRLQNKVLEYRDQCQRSELQLEDVNTQLLSTER
RIRDEHSDALEIALIKLEEEQQRSLGLADTNALLRQQLSQSEQANQALREDLQKLTSDWT
TALEEAEHREDDWQRERECLSGHVGQQQASLLSGWRSVVALRRHCHTLKTAVDRDLWQLR
AEFSRLSSSLLSSCDSVSSSLRLSASPIKPFSSPPPPLLPSSSTLVLPPLDSSSSLPPLF
SSSTLGTFSLGELEHREELEEQERREEQERREEKERREEKERREEQERETQVFQPTERIE
ELSRSLQAEDLQREDRQKEDLQREDRQKEDLQREDRQREERQKETERHRDTERSLQSVSQ
AVVKLSRVLSSSQTMCASPDSVLSLDLCSLLSVLSHAESALQWRHEELQGAELSLRRLCE
EKSAVQLRLKQLEDDNQLLNTHSQHTQLELTHTLDLLSREREASSSLRLWLEEVQRREEE
VQKEKDRLRRERDKQEERNRQLETETLRRVEAEVLENVQLTERETLLRVEIHSLKGALEK
QLLDRQRAEEEAADARDALQKSRDSVVSLSSSECALRREAHEGRDALDKMAALNAALALD
KKELNEQLLKLECELSDSQSQLQAVRSEVSSLQREVKTLHLDCDQLRAQREEEADVVRQL
RGGEREMERTLEEEKRLLVSLKEERERDEDQLEELSSQHASACLELKEAQQQLRQSEEEV
RRRERQQEEQQWESRRQQEEQQHLQRQKEQLEEQLEELRCVAEALQQQLHQQQKQLSQSE
MDRSQLTTHVVTVQQVKAALQGEIECLRGELERTTTRREKEEEMREEERKRSEEEKEALK
EETERLTEEVEDLKRRRRWDEEKETEAWQREREDLSEELGMRDGEVEALRRRIEGLMEEE
RDRQKEVERLREEVKRTDVRLREGEVKREEEVEALCDRMERLEREREEREEEMERLRSEA
EEVKRCRRRVEEVDEEINRLRKETSALQEEKRQRKRLHDGEEEERRRRAEEEVELLRVRL
SVAKEECEEVKEQVERRERSLERQMSAVREREEEVEELKEQLRLAVEQKEEGERERREAN
DKLKQSAGREEQQEALLKETSALLRKERREGGEKDVTISSQARELQEARAEGEGAKRRAG
EREEACDRLEEEVKESREEAERSSKEVAKFNRILKEREEEAQHLRATLEEMEEDGREREA
LRRIETERRRRLDNKLLEMEEEKNSLEEKRRLDDRLEEMEMEVREKREDLRRTEEEKRRL
EEDLKEERGRLVEAERSQHLLLEERERSRTRELEEEKARLWRSEREVKSLRQEVQKEEKK
KKEIQEEMTTLKEAVQREQRREEEAQEELRRAGKVVVALREEVKREQWEKKEAQEELMKR
REDMTSLREEVQKEQKEKEYVQDTLMRNEKEVTALREEVQKEKEYVQDTLLRNEKEVTVL
KEEVQKEQKMKEYVQETFLRTQKEVTALREEVQKEQKEKEYVQETLMRNKKEVTALREEV
QKEKEYVQDTLLRNEKEVTALKEEVQKEQKMKEYVQETLMRNEKEVTALREEVQKEQKEK
EYVQETLLRNEKEVTALKEEVQKEHKEKEYVQETLMRNEKEVTALKEEVQKEHKEKEYVQ
ETLMRNEKEVTALREEVQKEQKEKEYVQETLMRTQKEVTALREEVQKEKEYVQEMLMRTE
KEVTALKEEVQKEQKEKEYVQETLMRNEKEVTALREEVQKEQKEKEYVQETLMRTEKEVT
ALREEVQKEQKEKEYVQETLMRNEKEVTALKEEVQKEQKEKEYVQETLMRNEKEVTALKE
EVQKEQKEKEYVQETLMRNEKEVTALKEEVQKEKEYVQETLMRAEKEVTALREEVQKEHK
EKEYVQETLMRNEKEVTALKEEVQKEQKEKEYVQETLMRNEKEVTALKEEVQKEQKEKEY
VQETLMRNEKEVTALKEEVQKEKEYVQETLMRAEKEVTALREEVQKEHKEKEYVQETLMR
NEKEVTALKEEVQKEQKEKEYVQETLMRTEKEVTALREEVQKEEEYVQDTLMRNEKEVTA
LREEVQKEQKEKEYVQETLLRNEKEVTALKEEVQKEHKEKEYVQETLMRNEKEVTALREE
VQKEKEYVQETLMRTEKEVTALREEVQKEQKEKEYVQETLMRTEKEVTALREEMQKEQRR
REEAQEELKEVQQSMEVNLSSLQSQVSNVSQNRERVKEEEKESLRVALQEVKEEKEQMKE
SLRVALQDVTKLKLLLQESHTEDKRLRSALKEEVQRVREEAEMERGEVEELRARAKALER
RRREMMEELEEARQAKDKAEEHSREAQERWRSRVEQVEEEQEVKLKALSKEIQRLREREE
ETERRSRLEEVRMEAEKPQREEMDGWRSRDQETNNKEIGGGGGGGEDEEEEEEEQISSLQ
QEKEEIRRLLRQREAEVYFLTQRTDELEKDRDRVRLALERTEAAMIGYRETAHQREQSLG
AEPNADEAVGGRLLVLQHLVAELELEQKRLNKKNSHLENQKDKLKKDRNSLRDTLRQVEA
ERSRFRQQQTDSSRSQESADTTEVGYLRSRVRELEDQVSQLRLSLATDHQQRAEFIQQSF
RNSQWLLSLRHDLTDSLAAVTHCPIPSVLESETQRLDRSLREEELKMSLSQS
NT seq
8079 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcggagctgctgattgggtggcaccaggagaaggcggagcttacgaaggaggtg
tgccgtctgcaggaggagctggctgagagtcgagcagagagggaggagctggagtctagg
agcagagctctgaatgacaggctgtaccagtcagtgtctccctccctcgccctctctctg
cagggggagggggagcagagggagtggaagaggagggagagggatgggagggagagggag
gccagacaggctctgctcatccaccgactgcagaacaaggtgttggagtacagagatcaa
tgtcaacgatcggagctccagctggaagacgtaaacacacagctgctcagcaccgagcgc
aggattagggatgaacatagtgacgctctggagatcgccctcatcaagctggaggaggaa
caacagaggtctcttggattggctgacacaaacgctctcctccggcagcagctcagccaa
tcagagcaggccaaccaggccttgagggaggacctccagaagctgacgtctgattggacc
acagcgttggaggaggcggagcatagagaggatgattggcagagagagagggagtgtctc
tcaggtcatgtgggtcagcaacaggcttcgctgctgtcgggttggaggtctgtggtcgct
ctgaggagacactgtcacactttgaagaccgccgtcgacagggatctgtggcagttgcgg
gcggagttttctcgtctctcctcgtctctcctgtccagctgtgactctgtctcctcttct
ctgaggctcagcgcttctcccatcaaacctttttcctccccccctccccctcttctcccc
tcttcctccaccctggtcctccctcctctggactcctcatcatctctacctcctctcttc
tcctcctccaccctgggaaccttctccttaggagagctggagcacagagaggagctggag
gagcaggagaggagggaggagcaggagaggagggaggagaaggagaggagggaggagaag
gagaggagggaggagcaggagcgagagacacaagttttccagccgacagaacgcattgag
gagctgtctcgctcgctgcaggctgaggaccttcagagggaggacagacagaaggaggac
cttcagagggaggacagacagaaggaggaccttcagagggaggacaggcagagggaggag
aggcagaaggagacagagagacatagagacacagagaggagtcttcagtcagtcagtcag
gctgtggtcaaactgtccagagtcctgagcagcagtcagaccatgtgtgcgtccccagac
agcgtcctcagtctggatctgtgctccctgctgtcggtcctgtcccatgctgagagcgcc
ctgcagtggagacatgaggaactgcagggggcggagctctctctgcggcggctctgtgag
gagaaatcagctgttcagctccgactgaaacagctggaggacgacaaccagctgctgaat
acacactcccaacacacacagctggagcttacacacactctggacctactgagcagggag
cgcgaggcgtcgtcctcgctgcgtctctggttggaggaggtgcagaggagggaggaggag
gtgcagaaagagaaggatcgtctgaggagggagagagacaaacaggaggagagaaacaga
cagctggagacagaaacactcagacgagtggaggccgaagtgttggagaacgtccagctg
acggagagggagactctgctccgggtggagatccactctctgaagggggcgctggagaag
cagcttctggaccggcagagagcagaagaagaagccgccgacgccagagacgccctgcag
aagtccagagacagcgtggtgagtctctcctcctccgagtgtgcgttgaggcgggaggcg
cacgaggggcgcgacgctctggacaagatggccgccctgaacgcagctctggcgctggac
aagaaggagctgaacgaacagctgctgaagctggagtgtgagctgtcagacagccaatca
cagctgcaggcggtgaggtcagaggtcagctctctgcagagggaggtcaagaccctccac
ctggactgcgaccagctcagagctcaacgagaggaggaggccgacgttgtccgtcagctc
agaggaggagagagagagatggagagaacactggaggaggagaagagactgctggtctcc
ctgaaggaggagagagagagggatgaagatcagctggaggagctctcctcccagcatgcc
tcagcgtgcctggagctgaaggaggcgcagcagcagctgaggcagtcggaggaggaggtg
aggaggagagagcggcagcaggaggagcagcagtgggagagcaggaggcagcaggaggag
cagcagcacctgcagaggcagaaggagcagctggaggagcagctggaggagctcaggtgt
gtggcggaggctctccagcagcagctccatcagcagcagaagcagctctcacagtcggag
atggacagaagtcagctgaccactcatgtcgtcacggtgcagcaggtcaaagcagctcta
cagggggagatcgagtgtctacgaggagagctggagagaacgactaccaggagagaaaag
gaggaggagatgagggaagaggagaggaagaggagtgaagaggaaaaggaggctctgaag
gaagagactgagaggctgacggaggaggtggaagacctgaagaggaggaggagatgggat
gaggaaaaggagactgaggcctggcagagagagagggaggatctgagcgaggagctgggg
atgagggacggagaggtggaggcactgaggaggcgcatagaggggctgatggaggaggag
cgagacagacagaaggaggtggagaggctgagggaggaggtgaagaggacagacgtcagg
ctgagagaaggggaggtgaaaagagaggaggaggtcgaggcgctctgcgaccggatggaa
agattagaaagagagagggaggagagggaggaagagatggagcggttgaggagtgaagcg
gaggaggtgaaaagatgcaggaggagggtggaggaggtggacgaggagatcaacagactg
agaaaagaaacatctgcactgcaggaggagaaaagacagaggaagagactgcatgacgga
gaggaggaggagaggaggaggagagcagaggaggaggtggagctgctgagggtgaggctg
agtgtggccaaggaggagtgcgaggaggtgaaggagcaggtcgagcggagggagcgcagc
ctggagcgacagatgagcgccgtgagggagagggaggaggaggtggaggagctgaaggag
cagctgaggttggctgtggaacagaaggaggagggagaaagggagcggagggaggcgaac
gacaagctgaagcagagcgcagggagggaggagcagcaggaggcgctgctgaaagaaacc
tcggcgctcctcaggaaagagaggagggagggaggagaaaaggatgtcaccatctcctcc
caggccagggagctgcaggaagcccgggccgaaggcgagggagcgaagaggagagccgga
gagagggaggaggcctgcgacaggctggaggaggaggtgaaagagtcgagggaggaggct
gagcgaagctcgaaggaggtggcaaagttcaaccgtatcctgaaggagcgagaggaggag
gcgcagcacctacgagctacgctggaggagatggaggaggacgggagagagagggaggcg
ctgaggagaattgagacggagaggaggagaaggctggacaacaagctgttagagatggag
gaggagaagaatagcctcgaggagaaaaggaggttggatgacagattagaggagatggag
atggaggtgcgggagaaaagagaggatctgaggaggacagaggaggagaagaggaggcta
gaggaggacctgaaagaggagcgagggagattggtggaagccgagagaagtcagcacctc
cttttggaggaaagagagaggtccagaacgagagagctagaggaggagaaggcgagactg
tggagaagcgagagggaggtgaaatctctcagacaggaggtgcagaaggaagaaaagaag
aaaaaggagatccaggaagagatgacaaccctcaaagaggcggtacaaagggaacaaagg
agggaggaggaggcccaggaggagctgaggagggctggaaaggtggtggtagcgctaaga
gaggaggtgaaaagagaacaatgggagaagaaggaggcccaggaggagctgatgaagaga
agagaagacatgacatcgctcagagaggaggtgcagaaggagcagaaggagaaggagtat
gtacaagacacgttaatgaggaacgagaaggaggtgactgctctcagagaggaggtgcag
aaggagaaggagtatgtacaagacacattattgaggaacgagaaggaggtgactgttctc
aaagaggaggtgcagaaggaacagaagatgaaggagtatgtacaagagacatttttgagg
acacagaaggaggtgactgctctcagagaggaggtgcagaaggaacagaaggagaaggag
tatgtacaagagacattaatgaggaacaagaaggaggtgactgctctcagagaggaggtg
cagaaggagaaggagtatgtacaagacacattattgaggaacgagaaggaggtgactgct
ctcaaagaggaggtgcagaaggaacagaagatgaaggagtatgtacaagagacattaatg
aggaacgagaaggaggtgactgctctcagagaggaggtgcagaaggaacagaaggagaag
gagtatgtacaagagacattattgaggaacgagaaggaggtgactgctctcaaagaggag
gtgcagaaggagcacaaggagaaggagtatgtacaagagacattaatgaggaacgagaag
gaggtgactgctctcaaagaggaggtgcagaaggagcacaaggagaaggagtatgtacaa
gagacattaatgaggaacgagaaggaggtgactgctctcagagaggaggtgcagaaggaa
cagaaggagaaggagtatgtacaagagacattaatgaggacacagaaggaggtgactgct
ctcagagaggaggtgcagaaggagaaggagtatgtacaagagatgttaatgaggacagag
aaggaggtgactgctctcaaagaggaggtgcagaaggaacagaaggagaaggagtatgta
caagagacattaatgaggaacgagaaggaggtgactgctctcagagaggaggtgcagaag
gaacagaaggagaaggagtatgtacaagagacattaatgaggaccgagaaggaggtgact
gctctcagagaggaggtgcagaaggaacagaaggagaaggagtatgtacaagagacatta
atgaggaacgagaaggaggtgactgctctcaaagaggaggtgcagaaggaacagaaggag
aaggagtatgtacaagagacattaatgaggaacgagaaggaggtgactgctctcaaagag
gaggtgcagaaggaacagaaggagaaggagtatgtacaagagacattaatgaggaacgag
aaggaggtgactgctctcaaagaggaggtgcagaaggagaaggagtatgtacaagagaca
ttaatgagggcagagaaggaggtgactgctctcagagaggaggtgcagaaggagcacaag
gagaaggagtatgtacaagagacattaatgaggaacgagaaggaggtgactgctctcaaa
gaggaggtgcagaaggaacagaaggagaaggagtatgtacaagagacattaatgaggaac
gagaaggaggtgactgctctcaaagaggaggtgcagaaggaacagaaggagaaggagtat
gtacaagagacattaatgaggaacgagaaggaggtgactgctctcaaagaggaggtgcag
aaggagaaggagtatgtacaagagacattaatgagggcagagaaggaggtgactgctctc
agagaggaggtgcagaaggagcacaaggagaaggagtatgtacaagagacattaatgagg
aacgagaaggaggtgactgctctcaaagaggaggtgcagaaggaacagaaggagaaggag
tatgtacaagagacattaatgaggaccgagaaggaggtgactgctctcagagaggaggtg
cagaaggaggaggagtatgtacaagacacattaatgaggaacgagaaagaggtgactgct
ctcagagaggaggtgcagaaggagcagaaggagaaggagtatgtacaagagacattattg
aggaacgagaaggaggtgactgctctcaaagaggaggtgcagaaggagcacaaggagaag
gagtatgtacaagagacattaatgaggaacgagaaggaggtgactgctctcagagaggag
gtgcagaaggagaaggagtatgtacaagagacattaatgaggacagagaaggaggtgact
gctctcagagaggaggtgcagaaggaacagaaggagaaggagtatgtacaagagacatta
atgaggacagagaaggaggtgactgctctcagagaggagatgcagaaggagcagaggagg
agggaggaggcccaggaggaactgaaagaagtgcagcagagcatggaggtgaacctgagc
tccctgcagagtcaggtgtctaatgtgagtcagaacagagagcgagtgaaggaggaggag
aaggagagtctgagggtggcgctccaggaggtgaaggaggagaaggagcagatgaaggag
agtctgagggtggcactgcaggacgtgaccaagctgaagctcctcctgcaggagagccac
acggaggacaagcgtcttaggagcgccctgaaggaggaggtgcagagggtcagggaggag
gcggagatggagagaggagaggtggaggagctgagggctagagccaaggccctggagagg
aggaggagagagatgatggaggagctggaggaggcccggcaggcgaaggacaaggcagag
gagcacagcagggaggcccaggagaggtggaggagcagagtggaacaggtggaggaggag
caggaggtgaagctgaaagctttgtcgaaagaaatccagaggctgagggagcgcgaggag
gagactgagaggaggtcaaggctggaggaggtgaggatggaggcggagaagcctcagaga
gaggagatggatggatggaggagcagagaccaagagacaaacaacaaggagataggagga
ggaggaggaggaggagaggatgaggaggaggaggaggaggagcagatctcctcactgcag
caggagaaagaggagatcaggaggttactgaggcaaagagaagctgaggtctactttctg
actcagaggacagacgagctggagaaagacagggatcgtgtccgattggctttggagcga
acagaggcagctatgattggctacagggagacagcccaccaacgggagcagagcctgggg
gcggagcctaacgctgacgaggctgtggggggcaggctgctcgtgctgcagcatctggtg
gctgaactggagctggaacagaaacgactgaacaagaagaactctcatctggaaaatcag
aaagacaaactgaagaaagacagaaactcactgagagacactttgagacaggtggaggcg
gagcgttctaggttcagacaacagcagactgacagcagcagatctcaggagtctgctgac
accacagaagtcggatacctgaggagcagagtgagggagctggaggaccaggtgagtcag
ctgcgtctctcattggctaccgatcatcagcagagggcggagttcatccagcagtccttc
aggaacagccaatggctgctctctctgagacacgacctcaccgattcgctggccgccgtc
acgcactgtccaatcccgtccgtcctggagtctgagacgcagcgattggaccgcagcctg
agggaggaggagcttaagatgtccctcagccaatcgtaa
DBGET
integrated database retrieval system