KEGG   Cyclopterus lumpus (lumpfish): 117750492
Entry
117750492         CDS       T09199                                 
Symbol
rev1
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein REV1
  KO
K03515  DNA repair protein REV1 [EC:2.7.7.-]
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03460 Fanconi anemia pathway
    117750492 (rev1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117750492 (rev1)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Y-family DNA polymerases
    117750492 (rev1)
SSDB
Motif
Pfam: IMS IMS_HHH_1 REV1_C IMS_C BRCT BRCT_2 POLH-Rev1_HhH UBM IMS_HHH LIG3_BRCT HHH_5 PTCB-BRCT DUF7674
Other DBs
NCBI-GeneID: 117750492
NCBI-ProteinID: XP_034417622
Ensembl: ENSCLMG00005019840
LinkDB
Position
21:7570248..7581001
AA seq 1423 aa
MSRDGWAKKRASASGDNGWAELGGYMAAKVSKLDEQFKLDAPREKRKDSSYSNIFSGVSI
YVNGYTEPSADELRRLMMLHGGHFHVYYSRSKTTHIIANNLPNNKIQELKGEKIIRPQWI
PDSITAGHLLPHQQYQLYTKQKGPLFPGTTLRQTSEIAGPSHVLLQPSVHQKLHLPQRSL
QHSGLEHEESSSGCQNTSIPNASPLYQGNVQPQPIQQSSAVRFINPQPSPLPSTFLDADP
RHRSLLPNPSPTKPPQSTLQTPHTNLQHQRASQPQPQNNSSCNTGRSGYKEVDLKRNGLL
QTSLELISHSKMNEMQECGKGDPFPQVVKEAHLTNGHTHLVNGALKPEDRSPVTEEPSVD
RDLPQCRLKSPDDKPQSPPVQFPTKPDPYEFPHSPPKQSDTSPVSLKQSNSHGAHEQRAK
PPPPAYHEATGAESHPLPKPLHQPHPDSPHPDMTPLSHTPIRLNGSHHNAFSSDPASLNT
TDVTAKPDPPAEKAPSPPSKSSAQLLSRTGGLISEFYSHSRLHQISTWRSGFSEYVNELH
GKRKAVAGDSFPGKDRLRKYVSHQSTGSRGASAPACLKSCILHVDMDCFFVSVGIRHRPE
LKGKPVAVTSSRGQGRVPLRPGAQPQLEQQYYQRKHNHPKPVEDPHRTPSQESPDSPANG
VDQDVATLSMAEIASCSYEARQAGVRNGMFFGKAKQLCPSLQSVPYDFEAYKEVALTMYE
TLAGYTHDIEALSCDEVLIDGSTLLAELSINPEDLASAIRADIKEKTGCCASVGMGSNIL
LARLATRKAKPDGQYLLKSEEVDDFIRDLPVTSLPGVGPVMGRKLAATGVRSCGDLQQVS
LSQLQKKFGPRTGQTLFRFCRGLDDRPVRYEKERKSVSAEMNYNIRFTGIDEAESFLTNL
SMEVQKRLQEAGLRGRRVTLKVMVRKVGAPLESAKYGGHGICDNLARTVMLAQSTDSGQL
IAAAVIKLFHAMKLQVQDTRGVGIQVQLLDGHPSVPQNSAGPGTRSIKELLQGRGLSVRS
SNRGLCESFVSQFLSLFFKINVTDAADNNAXNVSSTTGPSSVSSSRRLSSPEPVPGTSGD
QQACNQTPKHSRARLNFSIEIPSPSQVDRSVLEALPVELREQVERSWSDRGRDGRPSNHQ
SPSPQPSAPLAQPSSLRARPTSPPRPPTLYAPPVGTLLLQIPNQPDSLGIVLELPNFSQV
DPDVFAALPKELQAELKSAYNRVTNVQPQEKISVDQKNPLLQLKQSGLGVVNGRVKRRYK
RKNAASPVKKGPSPLKRRHAANSPGKTLPPSIKPREAVNILRAENGPSTSISKPDIPEPR
AKFIPRPAPVLAGAYDLTDIRTLLREWVTTITDPMEEDILQVVKYCTDLIEDKDLEKLDL
IIKYMKRLMQQSVESVWSMAFDFILDNVQVVVQQAYGSTLKVA
NT seq 4272 nt   +upstreamnt  +downstreamnt
atgagtcgagatgggtgggcaaagaagagagccagtgccagtggggacaacggttgggct
gaactgggaggctacatggctgccaaagtgtcgaagctggacgagcagtttaaacttgac
gcccccagagagaaacggaaggatagttcatactccaacatttttagtggagtttccatc
tatgtcaatggatacacagagccaagtgcagacgagctgcgcagactgatgatgctgcac
ggtggccacttccacgtgtactactctcgctccaagaccacccacatcatcgccaataac
ttgcccaacaacaaaattcaggagctcaaaggggaaaagatcatccggccacagtggatc
cctgacagtatcacggctgggcatctcctgcctcaccaacagtaccagctgtacacgaaa
cagaaaggcccgctcttccctggcacgactctgcgccagacgtcagagattgccggaccc
agccatgttctgcttcagccgagcgtccatcaaaagcttcatctgccacagcgaagcctt
cagcactctggactcgagcacgaggagtcctcgtccggctgccagaatacctccatccct
aacgccagtccactttaccaaggcaacgtccaacctcagcccatccagcaaagctctgcc
gttcgcttcattaacccccagcccagtcccttaccatcaactttcctcgatgcagatccc
agacacagaagcctgctgcctaacccaagccccacaaagcccccacagtctactcttcaa
acgcctcatactaacctccagcaccagagagctagccaaccacaacctcagaacaactct
tcttgcaacactggccggagtggctacaaggaagtggatttaaaaagaaacggattactt
cagacctcattggaattgatcagccattcaaaaatgaatgaaatgcaagagtgtggcaaa
ggtgatcctttcccgcaggtggtgaaggaagcgcatctgacaaatggacacactcacctt
gttaatggtgccttaaagccagaggaccggtcccctgttactgaagaaccttctgttgac
agggacctgcctcaatgcagactcaagagtccagatgacaaacctcaaagtcctccagta
cagtttccgaccaaacctgacccgtatgagtttcctcacagtcctccgaagcaatcagac
acgtctcctgtctcgctgaagcaatccaattcacatggagcccacgagcagagagccaaa
cctccaccgcctgcctaccacgaggccaccggtgcagaaagccacccgctcccaaaaccg
ctgcatcaaccccatccagacagtccgcatcccgacatgactcccctttcacacactccc
attcgactgaacggaagtcaccacaatgccttttcatcggaccctgcctctttaaacaca
accgacgtaacggccaaacccgatcctcccgccgaaaaagccccgtcgccgccgtcgaag
tcttcggcacagctgctgtctcggacaggcggtttgatctccgagttctactcccactcg
cgtttgcatcagatctccacgtggaggtccggcttctccgagtatgtcaatgaactgcac
ggcaagcggaaagcagtggcgggcgactcttttcccgggaaagaccgactgaggaaatat
gtgtcccatcagtctacaggcagtcgaggcgcgtcggcacctgcgtgcctcaagtcttgt
atcctccatgtggacatggactgtttctttgtgtccgtggggatccgacatagaccggag
cttaaagggaagcctgtggctgtgaccagcagccgtggacagggcagagtgcccctgagg
cctggggcccaacctcagctggagcagcagtactaccagaggaaacacaatcatcctaaa
cctgttgaggatccacacagaactccttcacaagagagtcctgactccccagctaacgga
gtggaccaggatgtcgctactctctcaatggcagagattgcatcctgcagttatgaagcc
aggcaggcgggtgtgaggaacgggatgttttttggcaaagctaaacagctgtgtccctct
ctgcagtctgtcccatatgattttgaggcctataaagaggtggccctcaccatgtatgag
actctggcagggtacacccatgatatcgaagctctgagctgtgatgaagtgttgatagac
ggttccactctgctcgctgagttgagcatcaacccggaagacctggccagtgcgatcaga
gcggacatcaaggagaaaacgggatgctgtgcttcagtgggcatggggtccaacatcctg
ttggctcggctcgccacccgtaaggccaagccagatgggcaatacctcctaaagtctgaa
gaagtggatgatttcatcagggacctgccagtgaccagcttaccaggtgttgggcctgtt
atgggcagaaaactcgctgctacgggtgtgaggtcctgcggggacctccaacaggtgtct
ctgtctcagctgcagaagaagtttggaccccggaccggacaaaccctgttccgcttctgc
agaggcctggatgaccggcctgtccgctacgagaaggaaaggaagtccgtctcagccgag
atgaattacaacattcgcttcactgggattgacgaggcagagtctttcctgactaacttg
tccatggaggtgcaaaagcgtttacaagaagcggggctgcggggtcgcagggttaccctc
aaggtcatggttcgtaaggttggagcgccactggagtcggctaaatacggtggtcatggc
atatgtgataacctagccaggactgtgatgctcgctcagtccactgacagtggtcagctg
attgccgctgcagtcatcaagctgttccatgccatgaagttgcaggttcaggacacgaga
ggagtcggcatccaggttcagcttctcgacggacacccctctgtccctcagaactccgcg
ggccccgggacacgctccatcaaagagctgttgcaaggccgggggttaagtgtgcgatcc
agcaacagaggtttgtgtgaatctttcgtgtctcagtttctatcgttgtttttcaagatc
aatgtcacagatgctgctgacaataatgcantgaatgtttcctcaaccacaggcccgtca
tcggtctcctcgtcacgccgtctgtcctctcccgagccggtcccaggaacgagcggagac
cagcaggcgtgcaaccaaactcccaaacattctcgagcgcgtctcaacttcagcattgag
atcccctccccctcacaggtggatcgttctgtgttggaggcgttgcctgtggagctgaga
gaacaagtggagcggtcgtggagtgatcgtggtcgtgatgggagaccaagtaaccatcag
tcacccagtccacagccctctgctcctcttgcacagccctcctctctgagggctcgtccc
acctcccctcctcggcctcccaccctgtacgctccacctgttggcacgttgcttctacag
atcccaaaccagccagacagtctgggaattgtactggagctaccaaacttctcgcaggtt
gatccagacgtattcgccgcccttcccaaagagctccaggccgagctgaagtcggcctac
aaccgcgtaacaaatgtccagcctcaggaaaaaatatcagtggatcagaagaatccactg
ttgcagctcaagcagtcaggactcggagtcgtcaatggtcgagtgaagcggcgctacaag
agaaaaaatgcggcgagccccgttaaaaaaggtccttcccctctgaagaggcgccacgcg
gcgaacagcccaggcaaaacgctaccgccctctataaaaccacgggaagcagtgaacata
ttacgggctgaaaatggtccctcgacatcaatctcaaaaccagacatcccagagcctcgg
gccaaattcatccctcgccctgctccagtgttggccggagcctatgacttgacggacatt
agaacacttctacgggaatgggtcaccaccataacagacccaatggaggaggacatcctg
caggtggttaaatactgcactgatctcattgaggataaagatctggagaagttggattta
attataaaatatatgaaaaggctcatgcagcagtcggtggagtctgtttggagtatggct
tttgacttcatcctggacaatgtgcaggtggtcgtgcagcaggcttatggtagcaccctg
aaggtagcatga

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