Cyclopterus lumpus (lumpfish): 117750641
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Entry
117750641 CDS
T09199
Name
(RefSeq) ribosomal RNA processing protein 1 homolog B-like
KO
K14849
ribosomal RNA-processing protein 1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117750641
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
clum03009
]
117750641
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117750641
Ribosome biogenesis [BR:
clum03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117750641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop52
Motif
Other DBs
NCBI-GeneID:
117750641
NCBI-ProteinID:
XP_034417803
Ensembl:
ENSCLMG00005004099
UniProt:
A0A8C2WQ82
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All DBs
Position
21:23760734..23775990
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AA seq
980 aa
AA seq
DB search
MASIQEPEVQLAQRLASNEKPIRTKAVKKLRKYIHVRSHIATGGFTGEELLKLWKGLFYC
LWMQDKPLLQEELSNQISTLIHSFQDIDGQLLYLESFLQTFKREWTGIDRLRMDKFFQLV
RFMFRQTFEMLKRKNWESSAVARFLELLTAHLLQSGSGAPLGLQFHTLDLYMTELAAVGS
AELTADQNLIFIEPFCKTASKTKDRSLFSAICNSILSTIIDQAPFAIEDLMKELKAAEDS
DSDSGQASEEDNDELNKMMSKPVAKKRNRQQINGNISNEDEGNDSDDAELQVEDSDTEVS
CDEDVEQVLQFNYAALADKLFEFASRSSTPSRNRQRLYKIIKVLRDLNEGIFPQDEYPEE
VSTDEDDDMFGSRKMMKRGGGHMEDNNEGVPAAKKSKGGKKEAYTKQSKDSAKDDNEPAD
LTANENKKRKKKKKKKKKAVQDGGADGSEQTVAQPQCPIKETEGVKRDLEKEAQTQSPLA
SLKVTEGNTPEVQSETLLLSEVKKRPTGETSQPTDCTSDNMHQSVKIRKRETSQLKAEVT
VAAEEQQAVGTEPAMSSEANATASGKKKKTKGLKVKLQTDKIKAKLQSNAKAEIVLVKNT
ATTPETDSPTPAKQKKKGPAAEKKLKEAKVGPTAVLEKQTIAPCDKSKKKNLKADVGPTV
EAQFEEELKHTNAEVSSVEEESQDATTAPITKKKKKKGKQEDGSAVIQLNKKRKNNKNEC
KTSVADEAAAMETRPTVDAGKLPFEITVTTPAKNMKKKLAAAQVDVKAKSQLQVVCRVDA
ELSTETEVVASSGKPKKKKRKIPVVFEYEVDELEATLTNGVAEEHTATKKSKPDSDVGQA
STLCTKKSQKKAKASLGSASDFVTFHSNTTVPTPLFCKTKGSPSVPLSSKKKSQTPKSES
KKVTFGLKNNKTAEFRKTDRSLLVSPDGSLRVPFDPKQKPKFGVLKSPLTTRKTPKAIGK
TSTKTPKTTPKRRPLAADFF
NT seq
2943 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgattcaagagccagaggtgcagcttgcgcagagattagcgtccaacgagaag
cccatccggaccaaggctgtaaagaagctgaggaaatacatacatgtcaggtctcacatc
gcgacaggtggattcacaggcgaggagctgctcaagctgtggaagggtctgttctactgc
ctgtggatgcaggacaagccactgctccaggaggagctgtccaaccaaatctctaccctg
atccacagcttccaggatattgacggacaactgttgtacctggagagcttcctgcagacc
ttcaagagggagtggactggtatcgacaggctgcgcatggacaagttcttccagctggtt
cgcttcatgttcagacaaacatttgagatgctgaagaggaaaaactgggagagcagtgcg
gttgccaggtttctggagctgctgacggcacacctcttgcagagcggcagcggggctccc
ctcgggctgcagttccacacccttgacctttacatgaccgagctggcagccgtgggttca
gcagagctcactgctgatcagaacttgatattcatcgagccattctgcaaaacggcatcc
aaaaccaaggatcggtctcttttcagtgccatctgcaacagcatcctcagcactattatt
gaccaggccccctttgccattgaagatttgatgaaggagttgaaagcagctgaggactct
gactctgactcgggacaggcttctgaagaggacaacgacgaactcaataagatgatgagc
aaaccggtcgccaagaaaaggaataggcaacagataaacggcaatatatcaaatgaagat
gagggtaatgatagtgatgatgctgagcttcaggtggaagattcagacacagaggtgtca
tgtgacgaggatgttgaacaggtcctacagtttaactatgccgccctggcagacaagttg
tttgagtttgccagtcggagcagcacacccagcaggaacagacaaagactctacaagatc
atcaaagtactgcgtgatctgaatgaaggcatctttcctcaggatgaataccccgaggag
gtctccacagatgaagatgatgacatgttcggcagcaggaagatgatgaagaggggaggt
ggtcacatggaggataacaatgagggagtgccagcagccaagaaaagtaaagggggtaaa
aaggaggcctacacaaagcaaagcaaggattcagcgaaagatgacaatgaaccagctgac
ctaactgcaaatgaaaacaagaagaggaagaagaagaagaagaagaaaaagaaagcagtg
caggatggcggtgcagacggatctgaacagactgttgctcaacctcaatgtccaataaaa
gagaccgagggagtgaaaagggatttggaaaaggaagcacagacacaaagccccctcgca
tcgttaaaagtgacggagggaaatactccagaggtacagtcagaaactctgctcctctct
gaagttaagaaacggcccacaggagaaaccagccaacccactgactgcacgagtgacaac
atgcaccaatctgtaaagatcagaaagagggagacttctcagcttaaagctgaggtgacc
gtggcagcagaggagcagcaggctgttggaacagagccagcgatgtcctccgaagccaat
gctacggcctcgggtaagaagaaaaaaacgaagggcctgaaggtgaagttgcaaacggat
aagattaaggctaaactgcagagcaatgcaaaagcagaaatcgttctagttaaaaacacg
gcaacgacacctgaaactgattctccaacccctgccaagcagaaaaagaagggcccggcg
gctgagaagaagctcaaggaggcgaaggttggcccgaccgccgtacttgagaagcaaaca
atagccccatgtgataagagtaagaaaaagaacctcaaagctgatgtaggaccaacagtt
gaggctcaattcgaagaagagctaaaacacaccaacgctgaagtcagttcagttgaggaa
gaatcacaagatgccaccacagcgccaattacaaagaagaaaaagaaaaaaggcaagcag
gaggatggaagcgctgtaatccaattgaacaagaagaggaaaaataacaaaaatgaatgt
aagacttcagtggcagatgaagcggcggctatggaaacccgtccgacagtggatgctggg
aaactgccgtttgagatcaccgtgacaacaccagcaaagaatatgaaaaagaagttggca
gcggcccaagtggacgtgaaggctaaaagccagttgcaggtggtttgcagagtcgatgca
gaactctcgactgaaaccgaagtggtcgcttcctctgggaaaccgaaaaagaagaagcgg
aagatccctgtggtgtttgagtatgaggtcgatgagctggaggctacattgaccaatggg
gtcgcagaagaacacaccgctaccaagaagtccaaaccagacagtgatgttggacaggca
tccactctttgcactaaaaagtcacaaaagaaggcaaaagcttccctggggtcggcatct
gacttcgtcacctttcacagcaacaccacagtcccaacgccactcttttgcaaaaccaag
gggagccccagcgtcccgctgtccagcaagaagaagagtcaaactcccaaatcagaatcc
aagaaggtgaccttcggtctcaagaataataagacagctgagtttcggaagactgatcgc
agcctgctggtgagtccagacggctcattacgagtgccctttgaccccaaacagaaaccc
aagtttggggtcttaaagtctccactcaccaccagaaagacccctaaggccatcgggaag
accagcacgaaaactccaaagaccacgccgaaacgccggcccttggcggcagacttcttc
taa
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