Cyclopterus lumpus (lumpfish): 117750677
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Entry
117750677 CDS
T09199
Symbol
pax6b
Name
(RefSeq) paired box protein Pax-6b isoform X1
KO
K08031
paired box protein 6
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117750677 (pax6b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
117750677 (pax6b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAX
Homeodomain
HTH_32
Homeobox_KN
HTH_Tnp_IS1
Motif
Other DBs
NCBI-GeneID:
117750677
NCBI-ProteinID:
XP_034417855
Ensembl:
ENSCLMG00005002725
LinkDB
All DBs
Position
3:17116493..17137306
Genome browser
AA seq
449 aa
AA seq
DB search
MPQKEYHSQATWESGVASMMQNSHSGVNQLGGVFVNGRPLPDSTRQKIVELAHSGARPCD
ISRILQTHDEVQVLDSEKVSNGCVSKILGRYYETGSIRPRAIGGSKPRVATPEVVAKIAQ
YKRECPSIFAWEIRDRLLSEGVCTNDNIPSVSSINRVLRNLASEKQQMGADGMYDKLRML
NGQTGTWGTRPGWYPGTSVPGQPNQDGCQPQEGAGENTNSISSNGEDSEETQMRLQLKRK
LQRNRTSFTQEQIEALEKEFERTHYPDVFARERLAAKIDLPEARIQVWFSNRRAKWRREE
KLRNQRRQANNSSSHIPISSSFSTSVYQAIPQPTTPVSFTSGSMLGRPDSALANSYNALP
PMPSFTMANSLPMQPSQTSSYSCMLPTSPPVNGRSYDTYTPPHMQAHMNSQSMTTSGTTS
TGLISPGVSVPVQVPGSEPDMSQYWSRLQ
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaaaagaataccacagccaagccacgtgggagtctggcgtagcctcaatgatg
cagaacagtcacagtggcgtaaaccagcttggtggtgtgtttgttaatggtagaccgctg
ccggattccaccaggcagaaaatagttgaactcgctcacagtggtgctcgaccctgcgac
atctccaggatactgcagacccatgatgaagtccaagtgctggacagtgaaaaggtatcc
aacggctgtgtgagcaagatcctgggccggtattatgaaactggctccataagaccgaga
gcaataggcggcagcaagcccagggttgccactccagaggtggtcgcgaaaatcgcgcag
tacaagcgggagtgcccgtctatctttgcgtgggagatccgtgacagacttctgtcggag
ggggtctgcaccaacgacaatatacccagtgtgtcatcgataaacagagtcctccgcaac
ctggctagtgaaaagcaacagatgggcgcagatggcatgtatgacaagctgagaatgctc
aacggtcagacaggaacttgggggacccggcccggctggtaccccggaacatcagtgcca
gggcagcccaaccaagatggatgccaaccacaagaaggagcaggagaaaatacaaactcc
atcagctcgaatggggaggattcagaggagacacagatgcgactgcagctcaagaggaaa
ctacagagaaaccgcacgtccttcactcaggagcagattgaagccctggaaaaagaattt
gaaagaactcattatccagatgttttcgcgagagagagactagcagcgaaaatcgacctg
ccagaagcaagaatacaagtatggttctcaaatagaagagcaaagtggaggcgagaggag
aagctgcggaaccagcgccggcaggccaacaactcctccagtcacattcccatcagcagc
agctttagcaccagcgtctaccaggccatcccacaacccaccacaccggtgtctttcacc
tcggggtcaatgctgggtagacctgactctgctctggcgaacagctacaatgcgttgccc
cccatgcccagctttaccatggcaaacagtctacctatgcaacccagccagacctcctct
tattcctgcatgctgcctaccagtccgcctgtgaacgggcggagctacgacacatacacg
ccccctcatatgcaggcacatatgaacagccaatcaatgaccacttctggtaccacctca
acaggactcatctctcctggagtgtctgtccctgtccaagtcccagggagtgagcctgac
atgtctcagtactggtcaagactacagtag
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