Cyclopterus lumpus (lumpfish): 117750691
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Entry
117750691 CDS
T09199
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clum04515
]
117750691
Cell adhesion molecules [BR:
clum04515
]
Cadherins
Protocadherins
117750691
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Motif
Other DBs
NCBI-GeneID:
117750691
NCBI-ProteinID:
XP_034417867
Ensembl:
ENSCLMG00005015926
LinkDB
All DBs
Position
21:9625931..9637711
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AA seq
1091 aa
AA seq
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MRLSALLFFLLWVKALTLKNLNYSVPEEQGPGTVIGNIAKDAGYGTIERGKKSNFRVLEN
SAPHLVDVDPESGLIFTKQRIDRETLCRRNPKCQLSMEVFANDKEICMVKIDIQDINDNS
PSFPSDHVNIDISENAAAGTRFPLTIAHDSDSGENGIKTYQVTRDDYNTFSLDLKVRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFEKSSYV
IEIPENSPPGKVLIDLNATDQDEGSNGQVVYSFTGYASERIQDLFSIDSNTGIIKVQGEI
DYEVNPIIEFDVQAKDLGPNPIPGHCKITVKVLDKNDNSPIISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDREMKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTLYVLQVPENNIPGEYLGSVLAHDPDVGRN
GTVLYSILPSHIGDVSVYTYVSVNPTNGAIYASRSFNYEQTKSFEFKVQAKDGGSPHMES
TSIVKVNILDVNDNLPVIILPLLQNDTAEIPVPRNVGIGYIVATVKAVDHDHGESGHLTY
EITEGNDDHLFEMDPVGGEVRTAHALWEEVAPVVELVVKVTDHGKPPLSAVAKLIIKANT
ETAAGGGSSPSGEQQQWDVSLPLIVTLCIISVMLLAVMTAIAVKSKHQDKETGNYNCRMA
EYSNPPVGKGKKKRINKSDIMLVQSEMEERDSASRMNVVSSPSLITSPICFDYQSPLPLT
LPRSEVMYLKTTPNSLTVPRAGCHSSFAGLSTDTPANRMSVIQTENFPSEPNYAGSRQPF
VQSSTFKDAERASLRDSGHGDSDQADSDQDTNKGSHCDTSAREALKMKATAVNGQPFEQE
QDKSVHCTDECRALGHSDRCWMPKLRVGSQADSADNRTNLFIPVGMDAMVETEIYGTISC
SSRKTLSTFGKEQRDSTILVANVKPYLKSQRALSPPLQESPSVASSPTKSSMPLDLANQE
SKEEREGGSDSSAYGPPDGQCSPLHTELEEPSYLTRELRPKSLSSSLIHSSVISQECGGS
DCAFDPRDSGN
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctctctgcactccttttctttctgctgtgggttaaagccctgacattgaaaaat
ctcaattattcggtcccggaggagcaaggacccggtactgttataggcaatatagcaaaa
gatgccggatatgggaccatcgagagggggaaaaaatccaacttcagagtactggagaat
tctgctccacatctggtggacgttgacccggagagtggactcatcttcaccaaacaaagg
attgacagggaaacgttatgcaggcgcaacccaaagtgccagctctctatggaggtgttt
gccaacgacaaggaaatatgcatggtcaagattgatatacaggacataaatgacaactcg
cccagttttccttcagatcatgtgaatattgatatttcagaaaatgcagctgctgggaca
cgcttccccctcactattgcacatgactctgattctggggaaaatgggataaagacttac
caggtcacgagagatgattacaatacattttctttggatttaaaagtgaggggtgatggg
actatatatccagagctggtggttcagagacctctggatagggaggatcagagccatcac
accctcctcctcacagcaattgatggcggggagtatccaagatcaggctccatgcaaatc
aacgtcagagtgactgactcgaatgacaatagcccagtgtttgagaaatcctcttatgtg
attgagattccagagaattcgcctcctggaaaagtgctcatagatttaaatgccactgac
caagatgagggaagcaatgggcaggtggtctattccttcactggatatgcatccgagaga
atccaagatttattctccattgactccaatactggcatcatcaaggtccagggagaaatt
gactatgaggtgaatccaatcatcgagtttgatgttcaagctaaggatctcggacccaac
ccaattccaggccactgtaaaataactgtcaaagtgcttgacaaaaatgacaactcgcca
ataataagttttgtctctgtccggcagggagccatcagtgaggccgcacctccagaatct
gtcatagcgcttgtgagagtgacagataaagactctggccgaaatggtcaacttcagtgc
agggtgctgggcaatgtacccttcagactgcaggagaacaatgataatttttacacgctg
ctcacagacagacccctggacagggaaatgaaagatgaatacaatgtaacaatagtggcg
agagacaatgggatcccgtctttaaactacactaagtcgtttactgtgaaaatattggat
gagaatgacaacgcgccacgctttacaaagacactgtatgtgctacaggtgcctgagaac
aacatcccgggggaatatttgggctctgttctggctcacgacccagatgtaggtcgaaac
ggaacagtgttgtactccattctaccatcacacataggagatgtttccgtgtatacctat
gtatctgtcaatcccaccaatggagccatatatgcctcacgctcttttaattacgagcaa
actaaatcctttgagttcaaagttcaagctaaagacggaggatcccctcacatggagagc
acttctatagtaaaggtcaatatcctcgacgtcaacgacaatctccccgttattatttta
ccccttctgcagaatgatactgctgaaataccagtgcctagaaacgtaggtattggatac
atcgtggctacagtgaaagcggtagaccatgaccatggagaaagtggacatttgacctat
gagatcacagagggaaacgacgaccacctgtttgagatggatccggtgggaggggaggtc
agaacggctcatgctctttgggaagaggtcgccccagtggttgagctggtggtgaaggta
actgaccatggcaagccccccttatctgccgtggctaaactgatcattaaggcaaacaca
gaaacggcagcaggagggggctccagcccgagcggggaacagcagcagtgggatgtatct
ctgcccctcatagttaccctctgcattatctctgtcatgctcttagcagtcatgaccgcc
attgctgtcaagtccaaacatcaagataaggagaccgggaattataactgccgtatggct
gagtactccaatcctccagtggggaaaggcaaaaagaaaaggatcaacaagagtgacatc
atgctggtgcaaagtgagatggaggagagagattctgcgagccggatgaatgtggtgagc
agtccttctctcatcacttcaccaatatgttttgactaccagagccctctgccgctcaca
ctgcccaggtcagaggtcatgtacctgaaaaccaccccaaacagcctgacagtcccaagg
gcaggttgccactccagctttgccgggcttagcacagacactccagcgaataggatgtcg
gtgatccagacagaaaatttcccctcagagcccaattatgctggcagcaggcagccattt
gttcaaagctcaacatttaaggatgcagaacgagcaagcctccgagacagtggccatggt
gatagtgaccaggctgacagtgaccaggatactaataaaggctcacactgcgacacgtct
gctagggaggccctcaagatgaaagcaacagcagttaatggccagccttttgagcaggag
caagacaaatcagtccactgcaccgatgaatgtcgtgcactgggacattctgacagatgc
tggatgccaaagttacgggtaggaagccaagcagacagcgccgataatcgcaccaacctt
ttcatccctgtgggaatggatgccatggtggagacagagatttatggcaccatcagttgc
agcagcagaaaaaccctcagcacgtttggaaaggagcaacgggacagtacaatcctcgtg
gccaatgtcaaaccttacttaaaatcgcagcgtgcactaagcccaccgctacaggagagt
ccatctgtggccagtagtcccaccaagagtagtatgcccctggacttggccaaccaagag
tccaaagaggagagggagggcggttcagacagcagtgcctatggccctccagatggccag
tgctccccactgcacacagagttggaggagccctcctacctgacccgagagctccggcct
aagtccctgtctagcagcctcattcacagctccgtcatcagccaggagtgcggggggtcc
gattgtgctttcgacccacgggactctggtaactga
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