KEGG   Cyclopterus lumpus (lumpfish): 117750712
Entry
117750712         CDS       T09199                                 
Name
(RefSeq) ras-related protein Rab-17-like
  KO
K07909  Ras-related protein Rab-17
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    117750712
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117750712
  09183 Protein families: signaling and cellular processes
   04031 GTP-binding proteins [BR:clum04031]
    117750712
Membrane trafficking [BR:clum04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    117750712
GTP-binding proteins [BR:clum04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    117750712
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 RsgA_GTPase GTP_EFTU AAA_24 AAA_16 AAA_5 ABC_tran
Other DBs
NCBI-GeneID: 117750712
NCBI-ProteinID: XP_034417905
Ensembl: ENSCLMG00005019346
LinkDB
Position
21:22791684..22795669
AA seq 227 aa
MGEKLPRGPGGARLRSDTSSRPVQTLRVKMVLLGSSGVGKSSLALRFATDEFRSTSPTVG
CAYLTRAVHLSDVTLRFEIWDTAGSEKYHSVTPLYYRGAHAALLVYDVSQRETFVRAQVW
LKELEKQYIPGSTVIWLVGNKVDRAQGRQVSVQEGRSLANDRGLFFTETSALSGDQVSEL
LFAVAHRVHECTGAQQGGLSEWKETPHVDLRRRDTITPLVSCCKVGP
NT seq 684 nt   +upstreamnt  +downstreamnt
atgggagaaaagctcccaagggggccaggaggagcccggctccgcagtgacacttccagt
agaccagtgcagaccctcagggtgaagatggtgcttctgggaagctctggtgtgggaaag
tccagcctggcactgcgatttgccacggatgaattcaggagtacatcgcccactgtaggc
tgtgcctatctgacccgggcggtgcatctgagtgatgtcactcttcgctttgagatatgg
gacacggcagggtcggagaagtaccacagtgtcaccccactttactacaggggggcccac
gctgcactactggtctatgacgtcagccagagggaaaccttcgtcagagctcaagtgtgg
ctcaaagagctggagaaacagtacatcccaggatccaccgtcatatggcttgtaggcaac
aaggtggatcgggcgcagggtcgacaagtctcagtgcaggaaggacggagtctggccaat
gacaggggcttattctttacagagacgtcagccctgtcaggggatcaggtcagcgagctg
ctgttcgctgtagcccacagagtgcacgagtgtactggagcgcagcagggaggtctgtca
gagtggaaggagacgccacatgtggatctgcgtcgcagagacacaatcacgcctttggtg
tcctgttgcaaagttggaccctaa

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