Cyclopterus lumpus (lumpfish): 117750743
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Entry
117750743 CDS
T09199
Symbol
arhgef7a
Name
(RefSeq) rho guanine nucleotide exchange factor 7a isoform X1
KO
K13710
Rho guanine nucleotide exchange factor 7
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117750743 (arhgef7a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117750743 (arhgef7a)
Membrane trafficking [BR:
clum04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117750743 (arhgef7a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF67_u2
betaPIX_CC
RhoGEF
RhoGEF67_u1
SH3_2
SH3_9
SH3_1
CH
PH
SOS1_NGEF_PH
Cep57_MT_bd
Motif
Other DBs
NCBI-GeneID:
117750743
NCBI-ProteinID:
XP_034417962
Ensembl:
ENSCLMG00005018834
LinkDB
All DBs
Position
21:complement(7525818..7547789)
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AA seq
802 aa
AA seq
DB search
MNSAEQTVTWLITLGVLESPKKTISDPEAFLQTSLKDGVVLCRLLERLSPGSTEKIYQEP
KNDGECLSNIKEFLKGCTSFRVEPFEASDLLLGLNFSKVLSSLVSLNKVTADIGVGSDSV
CARHSSAHRIKSFESLSSQASLGRSSKLLQNQFRSLDMSENSGQQLLVRARFNFQPNNED
ELAFDKGDLIGVTRQEDGGWWEGMFNGRTGWFPSNYVREIKGSEKQVSPKSGTLKSPPKG
FDTSAISKTYYNLVLQNILETETEYSKDLQSLLTNYLRPLQCIDKLSSSDAALILGNLEE
ISTFQQMLVQSLEERTKLPESQQRVGGFFLNLMPQMKALYVGYCSNHPSAVSLLTQHSEV
LGEFMEGRGAVSPGILPLTTGLSKPFMRLDKYPNLLKELERHMEESHPDRPDIQKCMASF
KNLSAQCQEVRKRKELELQILTESIRLWEGDDIKTLGSVLYMSQVLVQSPGSEEKSERYL
MLFPHVLLMLSASPRMSGFIFQGKLPLASMTVTKLEDCEAHRNAFELNGTMFDRLQVVCT
NQQDLQDWVEHLPRQIKHTASTGPSHKPLTVPCHTLPSHPLTPSRHSEGRGMTVAPTYHT
LPHPSSHGTSHSTMMWGPLEPPNTPKPWSLSCLRPAPPLRPSAALCYKEDLSKSPKSVKK
LLPKRKPERKQSEEEFALRKSTAALEEDAQILKVIEAYCTSAKTRQTLNSRPQRESGLHV
IVPGERKILAEDSRRNGQSTVEEKSLVDVVYGLRDEVQELKQDNKKMKRSLEEEQRARKD
LEKAVKRVLKSMNDPTWDETNL
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atgaattcggcggaacagacggtgacgtggttgattacgctcggggtgctggaatcgccc
aagaagaccatctcggatcccgaagcctttctgcagacctccctgaaagatggggtggtg
ttgtgtcggctgctggagcggctcagcccggggtccacggagaaaatttaccaagaaccg
aagaacgacggcgagtgcctgagcaacataaaggagttcctgaagggctgcacatcgttt
cgcgtcgagccgtttgaggccagtgacctgctgctcggactgaacttctcaaaggtgctg
agcagtctggtttctctgaataaagtgactgcggatatcggcgtgggcagtgactcggtg
tgcgcccgacactcctcagcccatcgcattaagtctttcgagtcgctgtcctctcaggct
tcactgggccggtcctccaagctgctgcagaaccagtttcgcagtctggacatgtcagaa
aacagcggccagcagctgctggtgagggcgcgtttcaacttccagccgaacaacgaagac
gagctcgccttcgacaagggcgacctcatcggcgtgactcgccaggaggatggcggctgg
tgggaggggatgtttaacggcaggaccgggtggtttcctagcaactatgtccgcgagatc
aagggctccgagaaacaagtgtcccccaagtctggcactcttaagagcccccctaaaggc
ttcgacacctccgcgatcagcaagacgtactataacctggtgttgcagaacattttagaa
acagagacagaatattccaaggacctccagagcctcctgaccaactaccttcgccctctt
cagtgcattgacaaactgagcagctcagacgcggctctcatcctgggaaaccttgaggag
atcagcaccttccagcagatgctcgtccaatcgctggaggagcgcaccaagcttccagag
agccagcaaagggtgggaggcttcttcctcaacctcatgccacagatgaaggctctttat
gtcggttactgctccaaccacccgtctgcagttagtttgctcacccagcacagtgaagtg
ttgggggagtttatggagggccgaggggccgtcagtcccgggatcctccccctgaccacc
ggcctcagtaaacccttcatgagactcgacaaataccccaacttactcaaagagcttgag
cggcacatggaggagagtcaccctgaccggccagacattcagaagtgcatggcgtctttc
aaaaatctgtctgctcagtgccaggaggtgcggaagcgtaaggagctcgagctgcagatt
ctcacggagtccatccggctgtgggagggggatgacatcaagaccctcggctccgtgctc
tacatgagccaggtcctagtccagagtcccggctcagaggagaagagtgagcgttacctc
atgctcttcccccacgtcctcctcatgctgtcggcgagccccagaatgagtggcttcatc
ttccagggcaaattgcccctggccagcatgacggtgaccaaactagaagactgcgaagcg
catagaaacgcctttgagctcaacggtacgatgtttgaccgtctccaggtggtgtgcacc
aaccaacaggacctgcaggactgggtggaacacctgcccagacagatcaaacacacggca
tccacgggacccagccacaaacctctcactgttccctgccacacgctcccatctcaccct
ctcaccccgtcccggcattctgaggggaggggcatgacggtggctcccacctaccacacc
ctgcctcacccctcctcccatggaacgtctcacagcaccatgatgtggggccctctggaa
ccgcccaacaccccaaaaccctggagcctgagctgcctgcggcctgcgcctcctttacga
ccctctgcggccctctgctacaaggaggatctcagtaaaagtcccaagagtgtgaagaaa
ctccttcccaagcgcaagccggagaggaaacagtctgaggaggaatttgctttgaggaag
agtacagctgctctagaagaagatgcccagatcctaaaggtcattgaggcatactgcacc
agcgctaaaaccaggcagacccttaactccaggccgcaaagggaatcggggctgcatgtg
atcgtccccggtgagaggaagatcctggcggaggattcccgtcgcaatggacaaagtact
gtagaagaaaagagcctggtggatgtggtgtacggcctgagggatgaggttcaggagctg
aaacaggataataagaaaatgaagcggtcgctggaggaggagcagagagcgcggaaggat
ctggaaaaagcggtgaagagggtgttgaagagcatgaatgacccgacgtgggatgagaca
aacctctga
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integrated database retrieval system
