Cyclopterus lumpus (lumpfish): 117750761
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Entry
117750761 CDS
T09199
Symbol
pou2f1b
Name
(RefSeq) POU domain, class 2, transcription factor 1b isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117750761 (pou2f1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
clum03000
]
117750761 (pou2f1b)
03021 Transcription machinery [BR:
clum03021
]
117750761 (pou2f1b)
Transcription factors [BR:
clum03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
117750761 (pou2f1b)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
117750761 (pou2f1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
117750761
NCBI-ProteinID:
XP_034417988
Ensembl:
ENSCLMG00005020347
LinkDB
All DBs
Position
21:complement(7944131..7958871)
Genome browser
AA seq
732 aa
AA seq
DB search
MADGGAASQDESSGPDAKVNNQSETTKCAMESGDGNTGIQINGFDFQRQTMPAITNAHAQ
ALLQQAAAHLNPPFLTSFLIQIPLPAQRLKAHSQKATQSKSEDSSALPTSVQQSVLPQTQ
LMLSGGQIAGLTLTPAQQQMLIQQAQAQLLAAAVQHSASQQNSTTGASISASAAAPMSQL
PMSQPIQIASQLQPQNLSLPQFVLLQPGHPIATLQQPTQFIISQPTQAQQGILQAQGLLN
LPQSQANLLPTQQSITLATQPATPTRTTAATPIQSLPHSQTPPKRLDTPTMEEPSDLEEL
EQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLKPLLEK
WLNDAVCAESLTSDQSLSSPSALGSPGMGIEGINRRRKKRTSIETNIRVALEKSFMEQNQ
KPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSSCISGVGSTPIKTLFTPSSPL
VASTASLVSSPTINTSTTLTVNPVMPLTSTSVSNLSFTGTTVGGTNTASVISTAPMITTA
SSPSLSPSPTTIQSNNSESKMQTIFNQIPTSILGSGQLMVSASGLSAALQGAQLPGSFAA
MAAAAGLNSGLMASSQFTPGGALLSLTGGLGSALSPALMSNSTMATIQGVYQSLASSGIT
SLDGSNLLFANTSAGTPIFLTPQNLSLLTSSPLSLVSAGPGGLQVIADAHHQATAAAVPV
QASTITTASKAQ
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagatgctaaagtgaat
aatcagtcagaaactactaaatgtgcaatggaaagtggtgacgggaacaccggaatccaa
atcaatgggtttgactttcagaggcagacgatgccggcaatcactaatgcacacgcacaa
gccctcctccaacaggctgcagcacatttaaatcccccctttctcacttcctttttaatt
caaattcctctccctgctcaaagactaaaggctcattctcagaaagccactcagtctaag
tcggaagactcgagcgctcttccgacctccgtccagcagagcgtattgcctcaaacccag
ctaatgttgtccgggggacagattgcaggattgaccctgaccccagcgcagcagcagatg
ttgatccagcaggcccaagctcagctcctggctgcagccgtgcagcattcagccagccag
cagaacagcaccaccggggccagcatctcggcctccgcagccgcacccatgagccagctg
cccatgtcacagcccatccagatcgcctctcagctacagccgcagaatctgagtctgcct
cagtttgttctgctgcagcccggtcacccgatcgccacactacagcagcctactcagttc
atcatctcacagccaacgcaggcccagcagggcatattgcaagcccagggtcttctgaat
ctacctcaaagccaagctaacctcctgccgactcaacaaagcatcaccctcgcaactcag
cctgccactccaacccgcacaacagcagccacacccattcagtccctgccccacagtcag
acaccacccaaacggttagacacccccaccatggaggagcccagcgatctagaggaactg
gaacagtttgccaagaccttcaaacagaggcgcatcaaactgggcttcacacagggggac
gtcggcctggccatggggaagctgtatggaaacgacttcagccaaactaccatctctcgc
tttgaggccttgaatctgagctttaagaacatgtgcaaactcaagccattactcgagaag
tggctcaacgatgcagtttgtgcagagagcctgacgtctgaccagtccctgtccagcccc
agtgccctgggctcccccggcatgggcatagaggggatcaaccgcagacggaagaagagg
accagtattgagaccaacatccgagtggccttagaaaagagctttatggagcagaaccaa
aaacctacctctgaagagatcaccatgatcgctgaccagctcaacatggagaaggaggtg
attcgggtctggttctgcaatcgccggcagaaagagaagaggattaacccccccagcagc
tgcatcagcggagtaggcagcacccccatcaaaaccctcttcacccccagtagcccgttg
gtggccagcacagcaagccttgtgagcagtccaactattaacacatccaccactctgact
gtaaacccagtgatgcctctcaccagcaccagcgtctccaatctgtctttcacaggcacg
acagttggaggcacaaacactgcatccgtcatctccactgcacccatgattactacggcc
agctctccgtctttaagtccctcgccaacgaccattcagtccaataactcggagagcaag
atgcaaaccatcttcaaccagatcccgacgtccattctcggatcgggtcagctgatggtg
tcggcgtcggggctgtccgcggcgctgcagggtgcacagttacccggcagctttgctgct
atggctgccgccgctgggctcaactcgggactgatggcgtcctcccagttcactccgggg
ggggccctgctcagtctgacgggcggcctcggcagcgcgctgagtcccgccctcatgagc
aacagcaccatggcgaccatccaaggtgtgtatcaatctctggcttcgagtggcatcact
tctctggacggcagcaacctgctgttcgccaacacttctgccggcacgccgatcttcctg
accccccagaacctgtcgctgctcaccagctcccccctcagcctggtgtcggccggcccg
ggggggctgcaggtcattgctgatgctcatcatcaagccaccgcggcggctgtgcctgtt
caagcctcgaccattaccactgcctccaaggctcagtga
DBGET
integrated database retrieval system
