KEGG   Cyclopterus lumpus (lumpfish): 117750765
Entry
117750765         CDS       T09199                                 
Name
(RefSeq) sorting nexin-4-like
  KO
K17919  sorting nexin-4
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:clum00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    117750765
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clum04131]
    117750765
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:clum04990]
    117750765
Membrane trafficking [BR:clum04131]
 SNARE
  SNARE associated proteins
   Others
    117750765
 Protein recycling
  Rab GTPases and associated proteins
   Rab4 associated proteins
    117750765
 Autophagy
  Cytoplasm to vacuolar targeting (CVT) pathway
   Other Cvt associated proteins
    117750765
Domain-containing proteins not elsewhere classified [BR:clum04990]
 Phox homology (PX) domain-containing proteins
  Sorting nexins
   117750765
SSDB
Motif
Pfam: PX Vps5 BEX
Other DBs
NCBI-GeneID: 117750765
NCBI-ProteinID: XP_034418004
Ensembl: ENSCLMG00005022249
UniProt: A0A8C3AZ12
LinkDB
Position
21:complement(13092294..13099946)
AA seq 436 aa
MADCGSNEEVAVIFNTDITSTESENNLINTMVEIGATLLRKMEINVTEAEKRTGKNTVNM
QETYTVYLIETRSAETVPEGGTPTTPDTLWRRYSEFELLRTYLLVTYPYIIIPPLPEKRA
EFVWHKMSADNLDPDFVERRRVGLENFLLRVASHPVLSNDKIFFLFLTEEKEWREVVLET
GFQDKVDSRLKSLSAMFRVKNPDKRFTALKHYSDELNSVISQLLRVRAKVADRLYGVYKV
HGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTFAASIDDILEEEEHYADQLKEYLFYAEAV
RSVCRKHELIQYELEMVAQDLVSKKQQKEELATGTVRVFSLKGMTSKLFGQESQEQRESR
LAALEQSTREGEETLKERNTECQEFVRTAWEDIGRFKEQKDRDLREALISYAIMQISMCK
KGIQVWSNAKECFNKM
NT seq 1311 nt   +upstreamnt  +downstreamnt
atggcagactgtggaagtaacgaagaagtggctgtgatctttaacaccgacatcacttca
acagaatccgagaacaacctcataaacacgatggtggaaataggggcaactttgttgaga
aaaatggagataaatgtgactgaggccgagaagagaacagggaagaacacggttaacatg
caggaaacctatacagtctacctcatagaaacacggtcagctgaaacagttccagagggc
ggtactcccaccacgcctgacactttgtggagacgctacagtgagtttgagttgctcaga
acatacctcctggtcacctacccctacatcatcatccctccactaccagagaagagggca
gagtttgtgtggcacaaaatgtcagctgacaacctcgacccagactttgttgagcgacgg
agagtcggcctggaaaacttcctgcttcgtgttgcatcacatcctgtcctttccaatgac
aaaatcttcttcctctttctgacggaggagaaagaatggagggaggtggttttggagaca
ggtttccaagacaaggttgactccagactaaagtctctgagtgccatgttcagagtcaag
aaccctgacaaacgattcacagcactgaagcactacagtgatgaactgaactctgtcatc
tctcagttactgagggtgcgggcgaaagtagctgacagactgtatggagtttacaaggtc
catggtaactatggcagagtcttcagtgagtggagtgcgattgaaaaagagatgggggat
ggactgcagagtgcgggccaccacatggacacgtttgctgcatcaatagatgacattctg
gaggaagaagagcactatgcagaccaactgaaggaataccttttctacgctgaagccgtc
aggtcggtgtgcaggaaacatgagctgatccagtatgaattggagatggtcgctcaggac
ctcgtcagtaagaaacaacagaaagaagagctggctactgggacagtgcgtgtcttttct
ctgaaggggatgaccagtaaactgttcggccaagagagccaggagcagagggagagcagg
ctggcagccctggagcagagcacccgtgagggagaggaaacgctcaaggaaaggaacacc
gagtgccaagagtttgtgcgaacagcctgggaagacattggacgttttaaggaacagaag
gacagagatttgcgtgaagcactaattagctatgccatcatgcagatcagcatgtgtaag
aagggaatccaggtgtggtccaacgccaaggagtgtttcaacaaaatgtga

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