Cyclopterus lumpus (lumpfish): 117750765
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Entry
117750765 CDS
T09199
Name
(RefSeq) sorting nexin-4-like
KO
K17919
sorting nexin-4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117750765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117750765
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
clum04990
]
117750765
Membrane trafficking [BR:
clum04131
]
SNARE
SNARE associated proteins
Others
117750765
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
117750765
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
117750765
Domain-containing proteins not elsewhere classified [BR:
clum04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117750765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
BEX
Motif
Other DBs
NCBI-GeneID:
117750765
NCBI-ProteinID:
XP_034418004
Ensembl:
ENSCLMG00005022249
UniProt:
A0A8C3AZ12
LinkDB
All DBs
Position
21:complement(13092294..13099946)
Genome browser
AA seq
436 aa
AA seq
DB search
MADCGSNEEVAVIFNTDITSTESENNLINTMVEIGATLLRKMEINVTEAEKRTGKNTVNM
QETYTVYLIETRSAETVPEGGTPTTPDTLWRRYSEFELLRTYLLVTYPYIIIPPLPEKRA
EFVWHKMSADNLDPDFVERRRVGLENFLLRVASHPVLSNDKIFFLFLTEEKEWREVVLET
GFQDKVDSRLKSLSAMFRVKNPDKRFTALKHYSDELNSVISQLLRVRAKVADRLYGVYKV
HGNYGRVFSEWSAIEKEMGDGLQSAGHHMDTFAASIDDILEEEEHYADQLKEYLFYAEAV
RSVCRKHELIQYELEMVAQDLVSKKQQKEELATGTVRVFSLKGMTSKLFGQESQEQRESR
LAALEQSTREGEETLKERNTECQEFVRTAWEDIGRFKEQKDRDLREALISYAIMQISMCK
KGIQVWSNAKECFNKM
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcagactgtggaagtaacgaagaagtggctgtgatctttaacaccgacatcacttca
acagaatccgagaacaacctcataaacacgatggtggaaataggggcaactttgttgaga
aaaatggagataaatgtgactgaggccgagaagagaacagggaagaacacggttaacatg
caggaaacctatacagtctacctcatagaaacacggtcagctgaaacagttccagagggc
ggtactcccaccacgcctgacactttgtggagacgctacagtgagtttgagttgctcaga
acatacctcctggtcacctacccctacatcatcatccctccactaccagagaagagggca
gagtttgtgtggcacaaaatgtcagctgacaacctcgacccagactttgttgagcgacgg
agagtcggcctggaaaacttcctgcttcgtgttgcatcacatcctgtcctttccaatgac
aaaatcttcttcctctttctgacggaggagaaagaatggagggaggtggttttggagaca
ggtttccaagacaaggttgactccagactaaagtctctgagtgccatgttcagagtcaag
aaccctgacaaacgattcacagcactgaagcactacagtgatgaactgaactctgtcatc
tctcagttactgagggtgcgggcgaaagtagctgacagactgtatggagtttacaaggtc
catggtaactatggcagagtcttcagtgagtggagtgcgattgaaaaagagatgggggat
ggactgcagagtgcgggccaccacatggacacgtttgctgcatcaatagatgacattctg
gaggaagaagagcactatgcagaccaactgaaggaataccttttctacgctgaagccgtc
aggtcggtgtgcaggaaacatgagctgatccagtatgaattggagatggtcgctcaggac
ctcgtcagtaagaaacaacagaaagaagagctggctactgggacagtgcgtgtcttttct
ctgaaggggatgaccagtaaactgttcggccaagagagccaggagcagagggagagcagg
ctggcagccctggagcagagcacccgtgagggagaggaaacgctcaaggaaaggaacacc
gagtgccaagagtttgtgcgaacagcctgggaagacattggacgttttaaggaacagaag
gacagagatttgcgtgaagcactaattagctatgccatcatgcagatcagcatgtgtaag
aagggaatccaggtgtggtccaacgccaaggagtgtttcaacaaaatgtga
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