Cyclopterus lumpus (lumpfish): 117750816
Help
Entry
117750816 CDS
T09199
Symbol
tbc1d4
Name
(RefSeq) TBC1 domain family member 4 isoform X1
KO
K17902
TBC1 domain family member 4
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
117750816 (tbc1d4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117750816 (tbc1d4)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117750816 (tbc1d4)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
117750816 (tbc1d4)
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
117750816 (tbc1d4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
TBC1D_hel
DUF3350
PID
DUF5748
Motif
Other DBs
NCBI-GeneID:
117750816
NCBI-ProteinID:
XP_034418083
Ensembl:
ENSCLMG00005017601
LinkDB
All DBs
Position
21:complement(22188664..22212323)
Genome browser
AA seq
1257 aa
AA seq
DB search
MESPDERETSPPKSERRFALTYVGWSSLDRRTTLPMLPWLVAEIRRRSERGDCGPAVQPR
EVQLVLNPPFVRCVPSNSSSSSVFIFEHKAQLVSRFIHNSNDLTYFAYLTRCQPDNPESE
MSCHVFRACDPNQVPEVISSIRQVSKSALKDDAKPKQEADEAFYNSQKFEVLYCGKVTVL
LKKAPATLIDDCIDKFRLHEVERKRLRLLSGQRGSTESAPVEFLIGAEGDPLSSALNKSE
DTEGPGVEVMTGGKSLSNSASQSSLRGAFPECILEDSGFEEPQEFRTRCSSLAGSLQRKP
GEGVLLAPARRRHSSAPNHVQPSDSDKNRTMLFQVGRFEVNLISPDSKTVVLEKTFKDIS
SCCQGVKQSDHFGFICRDRAEDGPSQYGCYVFQCASESLVDEVMLTLKQAFTTAAALQSN
KTQIQLCEACPMHDLHKLCERIEGLYPPRAKLAIQKYLSQLMDNEQADIFERVQRLKPGS
DQEENELVVLHLRQLCGSKQKSHLHIGEAPQNAANSSSAGDGAATSSRFKLDILKNKARS
SLTSSLENIFARGASRMRGRLGSMGSISSFERQDEESPGHSPPGSPPAFPDDDDGDGGGG
NPEAGLQFRRRAHTFSHPPVKKRISFEGQPAGQSRQAPLRRQQSVNPELLQSSPAAYSRT
RSVSESESTFGLPSSFSAPTFLKSIYQGSLGSLSSLADSGSLKSNGEGRKRTQSVCSGDS
VSGGPPATPRRVSWRQKIFLRVASPMNKPPASMQRPDHPDGRELLPLSPCLDPLGRLLPP
AGDPFSGEKPKMTGPDYRALWKTAIHQQILLLRMEKENQRLEEASRDELHTRKMKLHYLE
VGQCSKEVQALWERKLTAPGRTTVPQDKEEVYRALSQGVPKSRRGEVWLLLSHQHRLRHR
LPQRQQAPDTPYQDLLKQLTAQQHSILVDLGRTFPTIQYFSAQLGAGQLSLYNLLKAYSL
LDTEVGYCQGISFLAGVLLLHMSEDQAFDMLKFLMYDLGIRQQFRPDMVSLQVQMYQLSR
LLHDYHRDLYNHLEEHEIGPSLYAAPWFLTLFASQFPLNFVSRVFDFVFVEGTGVIFKVA
LCLLSSHEGAIVECDSFESIVDYLKTTLPTLTQAQMEQTIAKVVEMDISKQLHAYEVEYH
VLQDEMLEAGPLPDDSDRLDKLEKTNVQLKKQNMELLEKLQAARHKIQTLETSVERFLSQ
ESKMKHMIRTLEQERAAHQKTIERMRSCLPPDALTDVEMTQIKTGPNGKAKTAAKKP
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccggatgagagggagaccagtcccccgaagtcggagaggaggttcgccctg
acctacgtcggctggtcctcgctcgacaggcggaccaccctgcccatgctgccgtggctg
gtggcggagatccgcaggaggagcgagaggggcgactgcggcccggcggtgcagccgagg
gaggtccagctggtgctcaacccgccgttcgtccggtgcgtcccgtccaacagcagcagc
tcgtcggtgttcatattcgagcacaaggcgcagctcgtctcgcgcttcatccacaacagc
aacgacctcacctacttcgcctatctcacgcggtgccagcccgacaaccccgagtccgag
atgtcctgtcacgtcttcagggcctgcgaccccaaccaggtccccgaggtcatcagcagc
attcgccaagtgtccaaatcagccttaaaggatgacgccaagcccaaacaggaagccgac
gaggccttctacaactcccagaagtttgaagtgctttactgtggcaaggtgacagttctg
ctcaaaaaggccccagccaccctcatcgatgactgcatcgacaagttccgtctgcatgag
gtcgagcgcaagcgcctgcgactgctcagcggccagcgggggtccacagagagtgcccct
gtggagttcctcattggggcagaaggagaccccctctcctctgctctgaacaagagcgaa
gacacagaaggccccggagtggaggtcatgactggaggtaaaagcctgtccaacagcgcc
agtcagagcagcctgcgaggagcgttccccgagtgcatcctggaggactccggcttcgag
gagcctcaggagttccgcacgcgctgcagcagcctggccgggagcctgcagaggaagccg
ggggagggcgtcctcctggcccccgcgcgccgcagacactccagcgccccgaaccacgtt
cagccctctgactcggacaagaaccgcaccatgctcttccaggtcgggcgttttgaagtg
aatctcataagtccggacagtaaaacagtggtgctggagaagaccttcaaagacatctcg
tcgtgctgtcagggtgtcaagcagtccgaccattttgggttcatctgccgcgaccgagcc
gaggacggccccagccagtacggctgctacgttttccagtgtgccagcgagtcgctggtg
gacgaggtgatgctgaccctgaagcaggccttcacgacagcggcggccttgcagagcaac
aagacccagatccagctctgcgaagcctgccccatgcacgacctgcacaagctctgcgag
cggatcgaaggtctctacccacccagagcaaagctggcgatccaaaaatatctctcccag
ctgatggacaatgagcaggctgacatttttgagcgagttcagagactgaagcccgggtcg
gaccaagaggagaacgagctggtggttctccatctgaggcagctctgtggaagcaagcag
aagtcccacctccacatcggagaggccccgcagaacgcagccaacagctcgtcggcagga
gacggcgcggccaccagcagtcgcttcaaactcgacatcctcaagaacaaggctcgctcc
tcgctcaccagctccctggagaacatcttcgcgaggggtgccagccggatgcggggccgt
ttgggaagcatgggaagcatcagcagttttgaaaggcaggatgaggagtctcccggtcac
tcccctccgggctcccctcccgctttccccgacgacgacgacggcgacggcggcggcggc
aacccggaagccggcctgcagttccgccgccgcgcccacaccttcagccatccacctgtg
aagaagcgcatctccttcgagggccagccggccggccagagcagacaggctccgctgcgc
agacagcagtctgtcaaccccgagctgctgcagagcagtcccgcggcctactcgagaacg
cgcagcgtctcggagagcgagtccaccttcggccttccctcctccttctccgcccccact
ttcctgaaaagcatttaccagggctcgctgggctccctgagctccctggcagacagtggg
agcctcaagagcaatggggaaggcaggaagaggacccagtccgtctgcagcggcgactct
gtgagcgggggcccccctgcgaccccacgcagggtctcctggagacagaagatcttcctg
agggtcgcctcgcccatgaacaagccgcccgcctcgatgcagcgtccagaccaccctgac
ggcagggagctgttgcccctctccccttgcctggatcctctggggcgtctgctgcccccg
gcaggcgaccccttttctggggagaagcctaagatgacagggcccgactaccgggccctc
tggaagaccgctatccaccagcagatcctgctgctgcgcatggagaaggagaaccagaga
ctggaggaagcgagcagggatgagctgcacacccgcaagatgaagctgcactacctggaa
gtgggtcagtgctccaaagaggtgcaagcattgtgggagagaaagctgacggccccgggc
agaacgacggtcccgcaggacaaagaggaggtgtatcgcgctctcagccagggcgttccc
aagagcaggcgcggggaggtctggctcctcctttcccaccagcaccggctgcgtcacagg
ctgccccagcgccagcaagccccggacaccccctaccaagacctgctgaagcagctcacc
gcgcagcagcattccattctggtggatctaggccggacctttcccaccatccagtacttc
tcggcccagctgggcgcagggcagctctccctctacaacctcctgaaagcctattctctg
ctggatacagaggtcggctactgccagggcatcagcttcctggccggagtgctgctgctg
cacatgagcgaggaccaggcctttgacatgctgaagttcctcatgtacgacctcggcatc
cggcagcagttcagacccgacatggtctccctgcaggttcagatgtaccagctctccaga
ctgctgcacgactaccaccgcgacctgtacaatcacttggaggagcacgagatcgggccc
agcctgtacgcggcgccgtggttcctcaccctcttcgcctcacagttcccgctcaacttc
gtgtcccgcgtcttcgatttcgtatttgtcgaagggaccggggtgatcttcaaagtggct
ctctgtctgctgagcagccatgagggggcgatagtggagtgtgacagcttcgagagcatc
gtggactatctgaaaactacacttcccaccctcactcaggcccagatggagcagaccatt
gccaaggtggtggagatggacatctccaagcagctgcacgcttacgaggtggagtaccac
gtcctgcaggatgagatgttggaagccgggccgctgcccgatgactccgaccggctcgac
aaactggaaaagaccaacgtgcagctgaagaaacagaacatggaactgctggagaaactt
caggctgcgcggcataagatccagacgctggagacgagcgtggagcgcttcctgtctcag
gagagcaaaatgaagcacatgattcgcactctggagcaggagagggcagctcaccagaag
accatcgaacgcatgcgctcgtgcctacccccggacgccctgacagatgtggagatgacc
cagatcaagacgggacccaacgggaaagccaaaactgcagccaaaaagccctga
DBGET
integrated database retrieval system
