KEGG   Cyclopterus lumpus (lumpfish): 117750839
Entry
117750839         CDS       T09199                                 
Symbol
ercc5
Name
(RefSeq) DNA repair protein complementing XP-G cells
  KO
K10846  DNA excision repair protein ERCC-5
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    117750839 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clum03400]
    117750839 (ercc5)
DNA repair and recombination proteins [BR:clum03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     117750839 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 117750839
NCBI-ProteinID: XP_034418122
Ensembl: ENSCLMG00005006069
UniProt: A0A8C2WZ24
LinkDB
Position
3:10752824..10759931
AA seq 1141 aa
MGVHGLWRLLESTGKPVNPETLEGKILAVDISIWLNQAVKGVRDREGNSVQNAHLLTLFH
RVCKLLFFRIRPIFVFDGDAPLLKKQTLAVRRQRKEDLSRESKQTNEKLLKTFLKRQAIK
AALGDHSKDPLPSLSTVRRDEVDDIYVLPALPAAEEKAKSSSEEEEEERELEETDDGYHM
YQGELYEDPNSVDINSEEFASLPPEMKHEILKDMKEFSKRRRTMYHKPPECSGDFSQYQL
AGLLQRNQLNQRLKSVEKEMSQRSAGSSLQLCQQDGDEHSVESRRLVSEDYSHYILINKG
SKKSEAAPESRPAAAAWSGGSLAGGTRRDRPEPLWRPACEGKAEVPGPSSEHSKPSVSKP
TRGDASPPSPRTLKAIRAAMNDSSEEETLDREKKDGSVSPRTLLAIQQALAEDEDGPTTK
MQANIPHPVPQVVISSSEEERDPDGVNSLPHEKSDFKGNSAVQRLHAEDGLFASSSEDET
EATVGRRNEALRFAAPQNTPMKSETEAKKRELAEDIRLGNRGQTEKQEELITKTNAVAAF
NRKTLSTNRSSQACGETEMHPGPLKQRSDEVIEALEERNGDDGKSEGGEKSESGESFIEV
SDEEFIEEGAEDSLVMVGMKGSPSEGRKEENKQEEKTEDGLKNAPGSPAADSEEEEEEDD
DDDDDDEEEDKKRQTEEKESKEGTETESSSTPAVNEWEHFDMDELEALESSLQVEQSSLR
QLKQQQERMANTVTGQMHLESQELLRLFGVPFMVAPMEAEAQCASLDRADHTHGTITDDS
DVWLFGGRHVYRNFFSQSKYVEHYQFSDMQNQLGLDRTKLINLAYLLGSDYTEGVPGVGC
VTGMEILNEFPGSGLEPLTQFREWWSEVQEKKRLVANPRDTKVKKKLRDLKLYPGFPNPA
VAQAYLQPAVDQTDNVFSWGRPQLDMIKEFCLSRFGWSSQRTEETLQPVIKQLSSQQTQL
RIDSFFRMEQQEKQAIRSQRLLRAVTCLKRKERKGGDEEEEDSDEERPSPSKTKKGKAAS
KSPKKGKGGGGGGGEREEERPVAGGGFLGSEVIDESPLPPLKDVSSTSQESVSVKAAPPS
TKAVPQRAKRSSSSSSEDSGGGGEVAMVTARSIFDGSQRGRGAKSTRGRGSKRGRGRGKK
L
NT seq 3426 nt   +upstreamnt  +downstreamnt
atgggagtgcatggactctggaggctgctggagagtacagggaaacccgtcaaccccgag
actctggaggggaagatcctggccgttgacatcagcatatggctgaaccaggccgtgaag
ggggtgagggaccgtgaaggcaacagcgtccagaacgcgcacctgctcactctcttccac
cgcgtctgtaagctgctcttcttccgcatcaggccgatcttcgtgttcgacggggacgcg
ccgctgctgaagaaacagacattggctgtgaggaggcagaggaaggaggacttgagccgg
gagtccaaacagaccaacgagaaactcctgaagacatttctgaagagacaggctatcaaa
gctgcacttggggaccacagtaaggatcctctgcccagcctctccactgtgaggagagat
gaggttgacgacatctatgttctaccagccctgccagctgcagaggagaaggccaaaagc
agttcagaggaggaggaggaagagagagagttggaggagacggatgacggttatcacatg
tatcagggtgaattgtatgaagaccccaactcagtggacatcaactcagaggagtttgcc
agcctgcctcctgaaatgaaacacgagatactcaaagacatgaaagagttttccaaaaga
cgcaggaccatgtaccacaaacccccagagtgttcaggagacttttcccagtaccagttg
gccggcctgctgcagaggaaccagctgaaccagcggctgaagagtgtggagaaagagatg
agtcagcggagcgccggcagcagtctacagctctgccaacaggacggggacgagcacagc
gtcgagtcacgccggctggtttcagaggactattcccactatatccttattaataaaggc
tccaaaaagagtgaggctgcccctgagagccgtccggcagctgccgcctggtccgggggc
tccctggcaggcggcaccagacgagacagacccgagcccctgtggcgtcctgcctgtgag
ggaaaggcagaagtgccgggtccctcttcagaacactccaaaccctcggtgtcgaaaccg
actcggggcgacgcatcaccaccctcgcctcggacacttaaagcgatccgggctgcaatg
aacgacagctcggaggaggagacgctggatcgggaaaagaaggatggtagcgtgtcccca
cgtaccctgctggccatccaacaagctctcgctgaggacgaagacggcccaaccaccaaa
atgcaggccaatattccccatcctgtgccacaagtggtcatcagcagctcagaggaagag
agagatcctgatggtgtgaactctctgcctcatgaaaaatctgattttaaggggaactct
gcagtccaacgtttacacgcggaagatggtttgttcgctagtagttccgaagatgagacg
gaggccacggtgggtcggagaaatgaagcacttcgctttgcggcgccgcaaaacactccg
atgaagtcagaaacggaggcaaagaaaagagagttggcggaggacataaggctgggaaat
agaggacagacggagaaacaagaagagctgatcacaaagacgaacgctgttgctgctttc
aatcgaaagacattatccaccaatcgctcttctcaggcatgtggggagactgaaatgcat
cctgggccgttgaagcagaggagcgacgaggtgatcgaagctctggaggagaggaacgga
gacgatgggaagtcagagggcggtgagaagagcgagtctggagagagcttcatcgaggtg
tcggacgaagaatttatagaggagggtgcagaggattcacttgtaatggttgggatgaaa
ggatctcccagtgagggccgtaaagaggagaacaagcaggaagaaaaaacagaagatggt
ttgaaaaatgctcctggcagtccagctgctgattcggaggaggaggaggaggaagatgat
gatgatgatgatgatgatgaagaagaagacaaaaagagacagactgaagagaaagagtca
aaggagggaacagagacagaatccagctcaactccagcggtaaatgaatgggaacacttt
gacatggatgagctggaggctctggagagctctctgcaggtggagcagagcagcctgcgg
cagctgaaacagcagcaggagaggatggcgaacacagtcactgggcagatgcacctggag
agccaggagctgctgcggctgttcggcgtgccgttcatggtggcgccgatggaggccgag
gctcagtgcgcatcactggaccgcgctgaccacacccacgggaccatcacggacgactcc
gacgtgtggctgtttggagggagacacgtctacaggaacttcttcagccagagcaaatat
gttgaacactaccagttcagtgacatgcagaaccaactgggtttggaccggactaaactg
atcaacctggcttacctgctgggaagtgactacacagagggcgtgccgggggtcggatgt
gtgactggcatggagatactgaatgagttcccagggtcgggcctggagcccctcacacaa
ttcagggaatggtggtcagaggttcaggagaaaaagcgcctggtggccaaccctcgggat
acgaaggtcaagaagaaattgagagacctaaaactgtatcctgggttcccgaaccctgcg
gtggctcaggcttacctgcagcctgccgtggaccagacagacaacgtcttcagctggggg
cggccacaactcgacatgatcaaagaattctgcttgagtcgtttcggctggagcagtcag
aggacagaggagactcttcagcctgtgatcaagcagctcagcagccagcagactcagctg
cggatcgactcgttcttccgcatggagcaacaggaaaagcaggcgattcgcagccagcga
ctgctcagagccgtcacctgcttgaagaggaaggagagaaaaggaggagatgaggaggag
gaggacagtgacgaggaaagaccatccccatccaaaactaagaaaggaaaggcagcaagc
aagagtccgaagaaaggaaaaggaggaggaggaggaggaggagagagagaagaggagagg
cctgtggcaggaggagggtttctggggtcggaggtgattgatgaatctcctcttccacct
ctgaaggatgtgagcagcaccagccaggagtctgtctcagtgaaggccgcccccccgtct
actaaggctgtacctcagcgggccaagaggagcagcagcagctctagtgaagacagcggc
ggtggcggggaagttgctatggttacagcccgatccatcttcgacggcagccaacgaggc
cgtggagcgaaaagcacccgagggagaggaagcaagagaggaagaggaagggggaagaag
ttgtga

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