Cyclopterus lumpus (lumpfish): 117751016
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Entry
117751016 CDS
T09199
Symbol
slitrk5b
Name
(RefSeq) SLIT and NTRK-like protein 5
KO
K25836
SLIT and NTRK-like protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04514
Cell adhesion molecule (CAM) interaction
clum04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
117751016 (slitrk5b)
04517 IgSF CAM signaling
117751016 (slitrk5b)
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Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_14
LRR_9
LRRNT
LRR_LRWD1
Endomucin
Insulin_TMD
Motif
Other DBs
NCBI-GeneID:
117751016
NCBI-ProteinID:
XP_034418403
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All DBs
Position
21:9657878..9664581
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AA seq
867 aa
AA seq
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MPLWISYVLLSAMSVCTIEVFGNYGEICQRLCACEEREGILTVSCENRGVVSISDISPVY
FSQYHLLLTGNLLKTLSADDFVEFKGLTILHLGNNDISEIEAGAFNGLQGLKRLHLNNNK
IDALKEEFFFGLESLEYLQIDSNYITHVAPNTLSRLRNLEVLILNDNLISSLPVNIFQYV
PLTHLDLRGNQLKVLPYSGLLEHMNSVVELQLEENPWNCSCELIALKTWLESISYTALVG
DVVCEFPFRLHGRDVDEVSKQELCPRRAIAEYEMPPLPHLITDAYHRTMPALVTASFTSS
GIARSSSRPTKGPRQSGTLKSRPTARIPSNKPQNYGQIISYQTKSPVPLDCPTACTCNLQ
ISDLGLNVNCQERKIEHISDLNPKPYNPKKMYLTGNYIPVVRRSDFIEATGLDLLHLGNN
RVSRIHDRTFGDLTHLRRLYLNGNLIDHLTADMFYGLETLQFLYLEYNIIKKVGSDTFQH
VPKLQLLFLNNNLLKTLPVGTFNGLTLARLNLRNNHLRYLPVSGVLDQLTAMVQVDLFEN
PWDCSCSILELKIWLEQLSTGTVVNNVICGSPTRLAGEDMRYIKTTNLCPNNSDILVSMI
PPSEESFPGSTITIETSLDSDTQYSAIPLSVMILALLFIFIVSVFVAAGLFVVMKKRHQK
SQNEHNNSMNACISSLNMEYGLYKKGSIPKVRTSAGHVYEYIPPPTETTSRTTGQTPTDS
KSVDGFRDFDELSGAFLAHSDEEAASNVISSEYSVTTPEPLNKPSNPHQDDQCYYRDVLE
SDKHTCYSNTLPRRHAAHSSSHYASDFDARHQYMHPDRIQQTILYCASPSTVYVEPNRSE
YWELKAKLHIDPDYLEVLEKRTTFTQF
NT seq
2604 nt
NT seq
+upstream
nt +downstream
nt
atgcctctttggatttcatatgttttgctaagtgcaatgtcagtgtgcactattgaggtg
tttggcaattatggagaaatatgtcaaagactgtgcgcctgtgaggagagagaggggata
ctcacagtgagctgtgagaacagaggagttgtgagtatctcagacatcagcccagtgtac
ttctcccagtatcatctgctgcttacggggaatcttttaaaaacgctatctgcagatgat
tttgttgagttcaaaggacttacaatattacatctggggaataatgacatatcggagatt
gaagcaggagcttttaatggacttcagggattaaaacgattgcatctcaacaataacaaa
attgatgccttgaaggaagagtttttctttggcctggaaagtcttgaatatctccaaatt
gattctaactatataactcacgtggcccccaataccttgagcagacttcgaaatctggag
gtcctgattctcaatgacaacttaatatctagtctgccggtgaacattttccagtatgtc
ccactgactcatttggatttaagagggaatcagctcaaagtgcttccctactcaggtctg
ctggagcacatgaacagtgtcgtggagttacagctggaggagaacccgtggaactgttcg
tgtgagctgattgcacttaagacgtggctcgagagcatatcatacacagctttagtcggc
gatgtcgtttgtgagttccctttccggcttcatgggagagatgttgatgaggtttccaaa
caggagttgtgcccaaggagagcgattgctgaatatgagatgccccccctgccacatttg
atcaccgacgcataccataggaccatgccggctctggtcacagcctccttcacctcatct
gggattgctcggtcctcatcaagacccacaaagggacctcgccagtcaggcacattaaaa
tcaaggcccactgctcgcatcccatctaataaaccacaaaattatgggcaaattatttca
tatcaaaccaagtcccccgtgcctttagattgcccaactgcctgcacctgcaatcttcaa
atttcagacctcggtctgaatgtgaactgccaggagcgaaagattgaacatatctctgac
ttaaatcccaaaccatacaatcccaaaaagatgtatctaacggggaattatatcccagta
gtgcgtcgatccgattttatcgaggcgacggggttagatttgcttcatcttggtaacaat
cgagtatctcgcatacatgaccgaacttttggtgatttgacacacctaagaagactatac
cttaacgggaacttgattgatcatctaacagctgacatgttttatggactggagactcta
cagttcttatatttagaatacaacatcattaaaaaggtcggttctgacacctttcagcac
gtacccaaacttcagcttctttttctgaacaataacctcttaaaaactttacccgtggga
acatttaatggcctgacattagccaggctaaatctccgcaacaaccatttgcgatatctt
cccgtcagcggcgtgctagatcaacttacagcaatggtgcaagtcgatttgtttgagaat
ccctgggattgctcttgtagcatactggagttaaagatttggctggagcagctcagcaca
ggcacagttgtaaacaacgtcatctgtggttcacccacaaggctagctggggaggatatg
aggtacattaagacaacaaatctttgcccgaataattctgatatacttgtctccatgatc
ccaccctctgaagaatctttccccggcagcactatcaccatagaaacatccttggactct
gacacgcaatacagcgccattcctttatctgtgatgattcttgcccttctcttcatattc
attgtgtctgtgtttgtggctgcaggattgttcgtggtaatgaaaaagcgccatcaaaag
agtcaaaacgagcataataactccatgaatgcttgcattagctctctcaacatggaatat
ggcctttacaaaaagggatccattcccaaagtcaggacatctgctggacatgtatatgag
tacatcccacctcccacagaaaccacaagcagaacaactggccaaaccccgacagacagc
aaatcagtggatggatttagagactttgatgagttgagcggcgcttttctggctcactcg
gatgaagaggcggccagtaatgttataagctcggaatacagtgtgaccactccagagccc
ctcaacaagccctccaaccctcaccaagatgaccagtgttactatagagatgtacttgag
tccgacaagcacacgtgctacagcaatacgttaccacgcaggcatgcggcgcattcatca
agtcactatgcctcggactttgatgcaaggcatcaatacatgcatccagatagaatacaa
cagacaatactctattgtgcatccccaagtactgtgtatgtggagcccaacaggagtgag
tactgggaactcaaagcaaagcttcatattgatcccgattaccttgaggttcttgaaaaa
cgaacaacgtttacacagttttaa
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