Cyclopterus lumpus (lumpfish): 117751019
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Entry
117751019 CDS
T09199
Name
(RefSeq) acetylcholine receptor subunit alpha-like
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
clum04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
117751019
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117751019
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117751019
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117751019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Claudin_2
Motif
Other DBs
NCBI-GeneID:
117751019
NCBI-ProteinID:
XP_034418409
Ensembl:
ENSCLMG00005021051
LinkDB
All DBs
Position
21:10675607..10683203
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AA seq
455 aa
AA seq
DB search
MNTVFFIFHLVILAGAAWASNDETLLVKTLFTGYNKVVRPVNHFKDPVVVTVGLQLIQLI
SVDEVNQIVSSNVRLKQQWKDVNLQWNPMDYNGIKKIRVPSTDIWRPDLVLYNNADGDFA
IVHETKVLLEYTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNPD
SDRPDLSNFMESGEWVMKDFRGWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVIIP
CMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLFT
MVFVIASIIITVIVINTHHRSPSTHTMPDWVRTVFIETIPNIMFFSTMKRPGKEKQTKSS
IYGADFDISDISGNQTTSVTYQSPITKNPDVRSAIEGIKYIAETMKSDEESNNAAEEWKF
VAMVLDHILLCVFMAVCLIGTLGVFAGRLIELSML
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtatttttcatttttcatctagtcattctagcaggtgctgcctgggcctct
aatgatgaaacacttctggtcaaaaccctcttcactggttacaataaggtggtccgtcct
gtcaatcacttcaaggacccggtggttgttactgtgggccttcagctcatccagctcatc
agtgtggatgaggtcaaccagatcgtcagcagcaatgtgcgactgaaacagcaatggaaa
gatgtgaacttgcagtggaacccgatggattacaatggcatcaaaaagatcagagttccc
tccactgacatttggcggcctgatctggttctctacaataatgctgacggagactttgcc
atcgttcacgagaccaaagtgctgctggagtacacaggaatgatcacatggaacccaccg
gccatcttcaagagctactgtgaaatcatcgtgctgcatttcccctttgacctccagaac
tgcagcatgaagctgggtacctggacctacgatggaaacttggtcgtcgtcaatcctgac
agtgaccggcctgatctgagtaactttatggaaagtggggagtgggtaatgaaggatttc
cggggctggaagcactgggtgtattatgcttgctgcccagacacaccttacctggacatc
acctaccacttcctcatgctgcggctcccactgtacttcatcgtcaacgtcatcatcccc
tgcatgctcttctccttcctgactggtcttgtcttctatcttcctacagactctggtgag
aagatgactctcagcatatctgtcttgctgtctctgactgtgttcctgctggtcattgtt
gagctgatcccctctacctccagtgctgtaccgctcattgggaagtacatgctcttcacc
atggtcttcgtcattgcctccatcatcatcactgtcatcgtcatcaacacccaccaccgc
tccccaagcactcacacaatgccggactgggtccgcacggtgtttattgaaaccattccc
aacatcatgttcttctcaacaatgaaacgcccaggaaaagaaaagcagactaaatccagt
atttatggtgctgattttgacatctcagacatctctggcaaccagaccacttctgttacc
taccagtcacccatcactaagaaccctgacgtccgcagtgccatcgaagggatcaagtac
attgcagaaaccatgaaatcagatgaggaatccaacaatgctgctgaagagtggaagttt
gtggccatggtgttggatcatattctgctgtgtgtgttcatggctgtgtgtctcatcggc
acgttaggcgtgtttgcaggccgtctcattgagctgagcatgctctaa
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