Cyclopterus lumpus (lumpfish): 117751020
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Entry
117751020 CDS
T09199
Symbol
cir1
Name
(RefSeq) corepressor interacting with RBPJ 1
KO
K06066
CBF1 interacting corepressor
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117751020 (cir1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cir_N
zf-CCHC_6
Motif
Other DBs
NCBI-GeneID:
117751020
NCBI-ProteinID:
XP_034418410
Ensembl:
ENSCLMG00005021067
LinkDB
All DBs
Position
21:10698408..10704068
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AA seq
460 aa
AA seq
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MGKSFANFMCKKDFHPASKSNIKKVWIAEQKLSFEKKKQEDLLQAYTKEQDCYNNRVLMG
DDRVKNGLNFMYEAPPGASKEETKEEGEGDEYKFEWQKVAPREKYAKDDMNIRDQPFGIQ
VRNVRCIKCHKWGHVNTDRECPLYGLSGINASSVASEEAAGPSMHPSELMAEMRNSGFAL
KKCVLGRNATVCDPSQEYVASDEEEDPEVEFLKSLTTKQKQKLLGKLDRLDKQKAKKKKS
KKQKKKSKRKEKKKHESSDSSSDSSNSSSSSSDSDSDSDSHGKHKSQKRKKTKKKDSCRD
NSSKSERRVKSQKKASSHRSRSASPHTGQKRREEESGDYRQTRTERGRSRSRSRSQENKI
KLEGGQERKRPNSRDRQRPSSSKSGLDRSRSREKGREDGGRDGRHSRDGERIRSGTDGRR
GRTADGRSRSGERREEREGRGRSTSRGERERSQDGAKRKH
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggggaagtcgtttgccaatttcatgtgcaagaaggatttccaccctgcgtcgaagtca
aatatcaaaaaggtatggatagcagaacagaagctgagcttcgagaagaagaagcaagaa
gatctcttgcaggcgtacacaaaagagcaagattgttacaacaacagggtgttgatgggg
gatgatcgtgttaaaaatggcctcaatttcatgtacgaggctccacctggagcatccaaa
gaggaaacgaaagaggaaggagaaggagacgagtacaaatttgagtggcagaaggtggca
cctcgagaaaaatatgcgaaagatgacatgaatattagagatcagccatttggaatccag
gtgcgcaacgtgcgatgcatcaaatgtcacaaatggggccatgtgaacacagacagagag
tgtcctctctatgggctgtcggggatcaatgccagctctgtggcctcggaggaggcagca
ggtccgtcgatgcacccctctgagttaatggcggagatgcgaaacagtgggtttgccctg
aaaaaatgtgttcttggtaggaatgctactgtttgtgatccatcgcaggaatatgttgcc
agtgatgaagaggaagaccccgaagtggaatttctgaagtcattaacgaccaagcaaaag
cagaagctccttggaaaacttgaccgcctggacaagcagaaggccaagaagaagaagagc
aaaaaacagaagaagaagagcaaaagaaaagaaaagaaaaagcatgaaagtagtgacagc
tcgagtgactcctccaatagtagtagcagcagcagtgatagtgactcagattcagacagt
catggcaagcacaagagccagaagagaaagaagaccaagaagaaagattcctgtcgggat
aacagctctaagagtgagcggcgagtcaagagtcagaaaaaggcctcctctcacagaagc
aggtcagcgagccctcacactggacagaagcggcgtgaagaggagtccggagattataga
caaacaaggacagagaggggaaggagcaggagtcgaagtcgcagccaagagaacaagatc
aagctggagggaggtcaagagcgaaagagacccaacagcagggaccggcagcgaccgagc
agctccaagtccggcttggacagaagtaggagccgcgagaaaggcagggaggacggaggt
agagatgggcgacacagcagagatggagagaggatcagaagtggcacagatggaaggaga
ggcagaacagcagatgggaggagtagaagcggggaaaggagagaggaaagggagggcagg
ggaagaagtacgagtcggggggaaagagagagaagccaagacggagccaagaggaagcac
tga
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