Cyclopterus lumpus (lumpfish): 117751026
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Entry
117751026 CDS
T09199
Name
(RefSeq) nuclear pore glycoprotein p62-like isoform X1
KO
K14306
nuclear pore complex protein Nup62
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
117751026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clum03019
]
117751026
Messenger RNA biogenesis [BR:
clum03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
117751026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nsp1_C
DUF4164
Motif
Other DBs
NCBI-GeneID:
117751026
NCBI-ProteinID:
XP_034418418
Ensembl:
ENSCLMG00005021120
LinkDB
All DBs
Position
21:10888740..10892796
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AA seq
568 aa
AA seq
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MSGGFNFGKASTGFSFGAQKPAVAAPSTGFGMTSAMPAATGGGFAFGTPTQAAPNPTGSF
SFGTPAKSTAAGGGFSFGTPTAPFGMVTPQPAAAPPQGLTLGTAVAPAPGSGFTMATGLS
AQTAAPAGGGFAFGTPSQALPQPAVQLQPAAPPTAATVMATTGAGVPSFGGFGFGSTKVQ
ATTAAPVAAPIAAPGGGFSFGNSTPSNLNMGIQPQTALTAAVTSQGGGFPFGIKPSSTPA
PPASIQAVQAPGPSLFASPISTAAAAAAAAATAAAATVTAAATGTCFSLGVAPTLAASTA
AATTTAAGGGLAFMLKPLGAATITSAPAPAATVAAAITGAPTAFTLGLKPLTGISIPTTS
TVTTLSTTTAPPVMTYAQLEGLINKWSLELEDQERHFLQQATQVNAWDRMLVENGEKITA
LHKEMEKVKLDQRRLNQELDFILSQQKELEDLLCPLEESVKDQSGTIYMQNADEERERTY
KLAENVDAQLKRMSQDLKEIIEHLNTSSGPADTSDPLQQICKILNTHMDSLQWIDQNSVL
LQRRVEEVSKLCDNQRKDQEKTFRLTFD
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgagtggcggtttcaacttcgggaaagcctccaccggcttctccttcggagcgcagaag
ccagcagttgcagcccccagcacgggcttcgggatgactagcgccatgcctgctgccact
ggagggggcttcgcgtttggcactcccacccaggccgcccctaaccctaccggctctttc
agctttggtacaccggcaaagagcacagcagccgggggaggcttctcttttgggaccccc
accgccccatttggcatggtcactcctcaacccgcagcagcaccacctcaagggctgact
ttaggcaccgcagtagctccagcaccggggtcagggttcaccatggccacgggtttgtcg
gcacagaccgccgctccagcaggaggaggctttgccttcggtactccttctcaagctcta
ccccaacccgcagttcaactccaacctgcagcaccaccaacagcagccacagtaatggca
actacaggagcaggcgtcccctcatttggagggttcggctttggatcaaccaaggtccag
gcgaccacagcagcccctgttgcggcccctattgctgctccgggagggggcttcagcttc
ggcaacagtactccatccaacctcaacatgggcattcagccccagacagcactcacggct
gcagtcacaagtcagggtggaggatttccctttgggattaaaccttcatcaaccccagct
ccccctgcatcaatccaggcagtccaggctccaggcccgtctctctttgcttcacccatc
tctacagctgctgctgctgctgccgccgccgccactgctgctgctgctactgtcactgcc
gctgcaacaggtacatgctttagtttgggtgtagctccaactttagcagcaagcactgct
gctgcaaccacaacagcagcaggtggaggtctggcctttatgctcaaacctctgggggca
gctaccatcacctctgcccctgcccctgctgccactgttgcagctgcaataacaggtgct
ccgacagcctttacactgggactcaaacctttaactggcataagtatcccaacaacttct
acagtgacgacactctctacaaccactgctcctccagtgatgacctacgcccagctcgag
ggtcttattaacaagtggagtcttgagcttgaggaccaagagagacatttcttacagcag
gctactcaggtaaatgcctgggaccgcatgctggtggagaacggagagaagatcacagcc
ctgcataaagagatggagaaggtgaagctggaccagaggaggctaaaccaggagctggat
ttcatcctctcccaacagaaagagctggaggacttactctgcccgctcgaggagtcggtg
aaagaccagagtggaaccatctacatgcagaatgctgacgaggaacgtgaaagaacatac
aagcttgccgagaacgttgacgcacagctgaagaggatgtcgcaggatctgaaggagatc
atcgagcacctgaacacgtccagcggcccagcagataccagtgacccgcttcagcagatc
tgtaaaattctcaacacccacatggattcacttcagtggatcgatcaaaactctgttctt
ctgcagaggagagtggaagaagtgtctaaattgtgtgacaaccagcgcaaggatcaggag
aagacctttcgtctaacatttgactga
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integrated database retrieval system
