KEGG   Cyclopterus lumpus (lumpfish): 117751075
Entry
117751075         CDS       T09199                                 
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
  KO
K19479  collagen type X alpha
Organism
clum  Cyclopterus lumpus (lumpfish)
SSDB
Motif
Pfam: Collagen C1q BclA_C
Other DBs
NCBI-GeneID: 117751075
NCBI-ProteinID: XP_034418480
Ensembl: ENSCLMG00005021740
UniProt: A0A8C3AV14
LinkDB
Position
22:15373078..15377936
AA seq 661 aa
MLILLCKMDVRVASIFVILVAFTAAHGDRYVVKKLMKAAPQYQPYSVKSQVVSVAGEPGP
QGEPGPEGPAGPPGPPGESAEGLAGAPGAPGSPGAPGRSIAGKPGSPGGPGKPGNDGAPG
ERGDTGASGLQGPRGAPGSAGSPGPSGLSSTGKPGPSGLPGAMGSRGAPGLKGHPGVPGL
PGDKGDRGVGIQGPQGETGPEGAMGAPGQPGEPGVGKPGKAGMPGESGKSGSSGRDGATG
PMGPQGPKGHNGAPGVGVTGKSGENGAPGLPGSAGPKGHQGPTGATGAPGVPGYGKPGSN
GEKGERGVTGSTGSTGAKGEQGPTGYTGATGATGSTGPAGPQGPLGFPGDAGVAGAKGDT
GATGAQGSKGNKGDQGAQGFAGKQGYPGAAGPPGPRGASGSTGDKGHGGAPGTPGSPGIP
GPAGPKGHTGRAGEPGTSGSDGAPGSRGSSGPQGPPGAPGIKGHPGLPGASGPAGLSAKG
ITGPQGPPGQPGEHGADGASGPPGAPGVPGPPGEVAYEKGMGMGEIMVKSPMSAFTASLI
TPYPADGTPIKFDQIVYNAENHYDPETGIFTCQIPGVYYFSYSIHVNGANALVALYKNGQ
PVMFTYDEYSKGFLDQMSGSAVLLLDEQDTVYVQIPDEEANGVFAAENVHCSFSGFLIAS
T
NT seq 1986 nt   +upstreamnt  +downstreamnt
atgctgattttactgtgcaagatggacgtacgagtagcaagcatcttcgtcatcctggtg
gcctttacagctgcccatggggaccggtatgtggtgaagaagctgatgaaggccgcccct
cagtaccagccctactctgtgaagagccaagtggtgtcagtggcaggtgagcctggtcct
caaggtgagcctggccctgagggacctgctggtcctcctggccccccaggtgagagtgct
gaaggtctggctggagcccccggagctcctggatctcccggagctcctggacgctccatc
gctggtaaacctggatccccaggtggacctggcaaacctggcaacgatggagcacctggt
gagaggggagacaccggagcatctggcctccagggaccaaggggagcccctggatccgct
ggaagccctggaccctctggcctctcttctactggcaaacctggaccatcaggtcttcct
ggagcaatgggatctagaggagcgcctggtctgaaaggacatcccggtgtacctggtctg
cctggtgataagggtgatagaggggtgggaattcaaggacctcagggtgagacagggcct
gaaggagcaatgggcgcacctggacaaccaggtgagcctggagttggaaagccaggaaaa
gcaggtatgccaggagagtcaggaaagtcaggaagctcaggtagggatggtgccacaggt
cccatggggccacagggacctaagggacacaatggtgccccaggtgtaggtgtgacaggc
aaatcaggtgagaatggtgccccaggtctgcctggctcagctggccctaaaggccaccag
ggacctactggagccactggtgcccctggagtcccaggatatggaaagccaggttcaaat
ggggagaagggagagaggggagttacaggttccacaggttccacaggtgcaaagggtgag
caaggtccaacaggatatactggtgctactggtgcaactggctccactggtcctgctgga
cctcaggggccattaggtttcccaggtgatgccggcgttgctggcgctaaaggtgacaca
ggtgcaactggagctcagggatctaaaggaaacaagggagatcagggagcacagggtttc
gcaggcaagcagggttatccaggcgcagctggtcctcctggacccagaggtgcctctgga
tccacaggtgacaaaggtcatggtggtgcccctggtaccccaggttccccaggtattcca
ggccctgctggacccaaaggtcataccggccgtgcaggtgagccaggtacctctggttct
gatggtgctcccggttccagaggatcttctgggcctcaaggtccacctggtgctcctggc
attaaaggacatccaggtctccctggtgcctccggccctgctggtttgtctgctaagggt
atcaccggacctcagggtccccctggtcagcctggtgagcatggtgctgatggagccagt
ggcccacctggtgctcctggtgtccctggtcctcctggtgaggttgcatatgagaagggc
atgggaatgggtgagattatggtcaagtcccccatgtctgctttcactgcatccctgatc
accccctaccccgctgatggcacccccattaagtttgaccagattgtgtacaatgctgag
aatcactatgaccctgagaccggcatcttcacttgccaaattcctggagtttactatttc
tcctacagcatccatgttaatggagctaatgccctggtggctttgtacaagaatggccag
cctgttatgttcacttatgatgagtacagcaagggcttcctggaccagatgtccggtagc
gctgtcctcttgcttgatgagcaggacacagtctatgtccagatccccgatgaagaggcc
aatggtgtctttgccgctgagaacgtccactgctctttctctgggttcctcattgcttca
acgtga

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