Cyclopterus lumpus (lumpfish): 117751075
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Entry
117751075 CDS
T09199
Symbol
col10a1a
Name
(RefSeq) collagen, type X, alpha 1a
KO
K19479
collagen type X alpha
Organism
clum
Cyclopterus lumpus (lumpfish)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
117751075
NCBI-ProteinID:
XP_034418480
Ensembl:
ENSCLMG00005021740
UniProt:
A0A8C3AV14
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Position
22:15373078..15377936
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AA seq
661 aa
AA seq
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MLILLCKMDVRVASIFVILVAFTAAHGDRYVVKKLMKAAPQYQPYSVKSQVVSVAGEPGP
QGEPGPEGPAGPPGPPGESAEGLAGAPGAPGSPGAPGRSIAGKPGSPGGPGKPGNDGAPG
ERGDTGASGLQGPRGAPGSAGSPGPSGLSSTGKPGPSGLPGAMGSRGAPGLKGHPGVPGL
PGDKGDRGVGIQGPQGETGPEGAMGAPGQPGEPGVGKPGKAGMPGESGKSGSSGRDGATG
PMGPQGPKGHNGAPGVGVTGKSGENGAPGLPGSAGPKGHQGPTGATGAPGVPGYGKPGSN
GEKGERGVTGSTGSTGAKGEQGPTGYTGATGATGSTGPAGPQGPLGFPGDAGVAGAKGDT
GATGAQGSKGNKGDQGAQGFAGKQGYPGAAGPPGPRGASGSTGDKGHGGAPGTPGSPGIP
GPAGPKGHTGRAGEPGTSGSDGAPGSRGSSGPQGPPGAPGIKGHPGLPGASGPAGLSAKG
ITGPQGPPGQPGEHGADGASGPPGAPGVPGPPGEVAYEKGMGMGEIMVKSPMSAFTASLI
TPYPADGTPIKFDQIVYNAENHYDPETGIFTCQIPGVYYFSYSIHVNGANALVALYKNGQ
PVMFTYDEYSKGFLDQMSGSAVLLLDEQDTVYVQIPDEEANGVFAAENVHCSFSGFLIAS
T
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgctgattttactgtgcaagatggacgtacgagtagcaagcatcttcgtcatcctggtg
gcctttacagctgcccatggggaccggtatgtggtgaagaagctgatgaaggccgcccct
cagtaccagccctactctgtgaagagccaagtggtgtcagtggcaggtgagcctggtcct
caaggtgagcctggccctgagggacctgctggtcctcctggccccccaggtgagagtgct
gaaggtctggctggagcccccggagctcctggatctcccggagctcctggacgctccatc
gctggtaaacctggatccccaggtggacctggcaaacctggcaacgatggagcacctggt
gagaggggagacaccggagcatctggcctccagggaccaaggggagcccctggatccgct
ggaagccctggaccctctggcctctcttctactggcaaacctggaccatcaggtcttcct
ggagcaatgggatctagaggagcgcctggtctgaaaggacatcccggtgtacctggtctg
cctggtgataagggtgatagaggggtgggaattcaaggacctcagggtgagacagggcct
gaaggagcaatgggcgcacctggacaaccaggtgagcctggagttggaaagccaggaaaa
gcaggtatgccaggagagtcaggaaagtcaggaagctcaggtagggatggtgccacaggt
cccatggggccacagggacctaagggacacaatggtgccccaggtgtaggtgtgacaggc
aaatcaggtgagaatggtgccccaggtctgcctggctcagctggccctaaaggccaccag
ggacctactggagccactggtgcccctggagtcccaggatatggaaagccaggttcaaat
ggggagaagggagagaggggagttacaggttccacaggttccacaggtgcaaagggtgag
caaggtccaacaggatatactggtgctactggtgcaactggctccactggtcctgctgga
cctcaggggccattaggtttcccaggtgatgccggcgttgctggcgctaaaggtgacaca
ggtgcaactggagctcagggatctaaaggaaacaagggagatcagggagcacagggtttc
gcaggcaagcagggttatccaggcgcagctggtcctcctggacccagaggtgcctctgga
tccacaggtgacaaaggtcatggtggtgcccctggtaccccaggttccccaggtattcca
ggccctgctggacccaaaggtcataccggccgtgcaggtgagccaggtacctctggttct
gatggtgctcccggttccagaggatcttctgggcctcaaggtccacctggtgctcctggc
attaaaggacatccaggtctccctggtgcctccggccctgctggtttgtctgctaagggt
atcaccggacctcagggtccccctggtcagcctggtgagcatggtgctgatggagccagt
ggcccacctggtgctcctggtgtccctggtcctcctggtgaggttgcatatgagaagggc
atgggaatgggtgagattatggtcaagtcccccatgtctgctttcactgcatccctgatc
accccctaccccgctgatggcacccccattaagtttgaccagattgtgtacaatgctgag
aatcactatgaccctgagaccggcatcttcacttgccaaattcctggagtttactatttc
tcctacagcatccatgttaatggagctaatgccctggtggctttgtacaagaatggccag
cctgttatgttcacttatgatgagtacagcaagggcttcctggaccagatgtccggtagc
gctgtcctcttgcttgatgagcaggacacagtctatgtccagatccccgatgaagaggcc
aatggtgtctttgccgctgagaacgtccactgctctttctctgggttcctcattgcttca
acgtga
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