Cyclopterus lumpus (lumpfish): 117751078
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Entry
117751078 CDS
T09199
Symbol
msh4
Name
(RefSeq) mutS protein homolog 4 isoform X1
KO
K08740
DNA mismatch repair protein MSH4
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clum03036
]
117751078 (msh4)
Chromosome and associated proteins [BR:
clum03036
]
Eukaryotic type
Meiosis-specific proteins
Others
117751078 (msh4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
AAA_14
AAA_22
nSTAND3
ATPase_2
AAA_29
Motif
Other DBs
NCBI-GeneID:
117751078
NCBI-ProteinID:
XP_034418489
Ensembl:
ENSCLMG00005016037
LinkDB
All DBs
Position
22:complement(10878460..10892689)
Genome browser
AA seq
766 aa
AA seq
DB search
MASLNLKCPELILSQFADTGTYAKVITKIHILVPLEILMPDTTSEKGKGTKLFSLITANF
PGVAFTAIQRKYFNERKGLEYIQQLCAPEFGTVLMEVQAKYYCLAAAAALLKYLEFIQNS
VYAGKSLKVIFKGSEQTAMIDSTSAVNLELVVNNRDHRSKHTLLGVLNHTKTPGGARRLR
SNILEPLVDVDTINIRLDTIQELLRDEELFFGLKDAIAHFLDIDQLLSVLVQIPKQETVQ
VAEAKITHIIQLKHTLDLVPRLRMALKNCNTALLKAYSTSLEDNGFDVILEQIKTVINED
ITYLKGSLNMRTQKCYAVRPDINEFLDIARRAYTEIVDDIAGLVSQMGEKYGFPMRTSYS
TARGFFIQMKLEGVVLPEGKLPAEFIKVTKHKNNYSFTIADLMKLNDRCDEALREIFHMS
YVVICQLLSTIHQHIHCLYKLSDAVSMLDMLLSLANVCTISDYVRPEFTDTMAIKQGRHP
ILERIVGQQPVSNNSYISEGSNFVIITGPNMSGKSTYLKQVALCQIMAQIGSFVPAAYAA
FRVADQIFTRIGVDDDFETNSSTFMLEMKEISYIIHNVSDRSLIIIDELGRGTSAEEGIG
ICHSVCEFLLSLKAFTLFATHFLELCQLESLYPNAENQHMEVQHTHSGGTGAESVLYTYL
LNRGCSEESHYGLRAAEMTALPSNIIKEAKMIASKVSQQLLAKHHSDPGTQRQRAVYKLA
TRLLQTARNSRLDHESLRMYLKGLKKQYEAELLAAGQPASIDTGEE
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggccagtctcaatttgaaatgtccagagctcatactctcgcagtttgcagacactggg
acgtatgccaaggtcataaccaagattcacatcttggtgccactagaaatacttatgcca
gacacaaccagtgagaaggggaaagggacaaagctgttcagtctcatcacggcgaacttc
ccgggagtagctttcactgctatccaaaggaagtattttaatgagaggaaaggactagaa
tacattcagcagctgtgtgctccagaatttggcacagtcctcatggaagtgcaagctaag
tattattgcctagcagcagctgctgctttgctgaaatatttagagttcatccagaactca
gtctacgctggcaagtctctcaaagtgatctttaaagggagtgaacagactgcaatgatt
gactcaacatctgccgttaacttggagttggttgtcaataacagagaccacagaagcaag
catactcttttaggggtacttaaccacaccaaaacacctggtggtgcgagaaggttgcgc
tctaatatcctagagcctctcgtcgatgtggacaccatcaacatacgcttggacaccata
caagagctgctgcgggatgaggagctcttctttggcctgaaggatgccatcgctcatttc
ctcgacattgaccagctgctctctgttctagtccaaattccaaagcaggaaacagttcag
gttgctgaagcaaaaattacacacatcattcaactgaaacacacactggacctggtgcca
cggttacggatggcgttgaagaactgcaatacagctctgctcaaggcatacagcacctca
ttggaggacaacgggtttgacgtgatcctagagcagatcaagacagtgattaatgaggac
ataacctacctgaaggggagcctgaacatgcgcacccagaagtgttacgctgtccgcccc
gacatcaacgagttcctcgacattgcacgaagagcttacactgagatagtggacgacatt
gcagggctagtgagccagatgggggagaaatatggttttccaatgcgtaccagctacagc
acagctcgaggtttcttcattcaaatgaagctcgaaggagtggtcttacctgaagggaaa
ctccccgctgagtttatcaaggtaacgaagcacaagaacaactacagcttcaccattgca
gacctgatgaagctgaatgaccgctgtgatgaggccctgagggagatctttcacatgtcc
tatgtggtgatatgtcaactgcttagcactatccaccagcacattcactgcctttacaag
ctctcggatgccgtgtccatgctggatatgttgctgtcactggccaatgtatgcaccatc
tcagactatgtgcgccctgagttcacggacacaatggccatcaagcagggtcgtcacccc
atcctggagcggatcgttggacagcagcctgtatcgaacaacagctacatttctgagggc
agcaactttgtcatcatcactggacccaacatgagcggcaaatccacctacctcaagcag
gtggcgctgtgtcaaatcatggctcagataggctcctttgtgcctgcggcttatgctgct
tttcgtgttgctgatcagattttcaccagaataggcgtggatgatgattttgaaacaaat
tcttccaccttcatgttggaaatgaaggagatctcttacataatccacaatgtaagtgac
aggtccctgatcatcatagacgagttggggcggggtaccagtgcggaggagggcatcggc
atttgtcactctgtttgtgagttcctcctcagcctcaaggcgttcaccctgtttgccaca
cattttcttgagctgtgccaactagagtctctttatcccaacgcggagaaccagcacatg
gaggttcagcacacacacagtggtggcactggtgcagagagtgtgttgtatacatacttg
ctgaatcgaggatgctctgaagaaagccactatggtctgagagcagcagaaatgacggca
cttccctcaaacataatcaaagaggcaaagatgattgcctccaaagttagccagcagctt
ttggccaaacatcacagtgatccaggaacacagaggcaaagagctgtgtacaagctggcc
acccgcctcctgcagactgccaggaactccagactagaccatgaaagcttgcgtatgtat
ctgaagggcttgaagaagcagtatgaggcagaacttctggcagcagggcagccagcgtcc
attgacacaggagaggaatga
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