Cyclopterus lumpus (lumpfish): 117751092
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Entry
117751092 CDS
T09199
Symbol
stxbp5b
Name
(RefSeq) syntaxin-binding protein 5 isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clum04131
]
117751092 (stxbp5b)
Membrane trafficking [BR:
clum04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
117751092 (stxbp5b)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
117751092 (stxbp5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
ANAPC4_WD40
WD40_Prp19
WD40
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Lgl_C
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
EIF3I
Synaptobrevin
Beta-prop_VPS8
Beta-prop_Vps41
WD40_like
Motif
Other DBs
NCBI-GeneID:
117751092
NCBI-ProteinID:
XP_034418521
Ensembl:
ENSCLMG00005020078
LinkDB
All DBs
Position
22:complement(18493537..18518303)
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AA seq
1191 aa
AA seq
DB search
MKKFNIRKVLDGLTAASSSSSSSATAQPGSGRDSDVIQETLQSEHFQLCKTVRHGFPYQP
SSMAFDPVQKILAVGTQTGALRLFGCAGVECYCQHESGAAVIQLQFLINEGALVSALADD
SIHMWNLRQKIPAILHSLKFSRERITYCHLPFQSKWLYIGTERGNIHIVNVESFTLSGYV
IMWNKAIELSTKTHPGPVVHISDNPMDEGKLLIGYECGVVVLWDLKCKKADCRYNYDEAI
HSVAWHHEGKQFVCSHSDGTLTTWNIRIPAKSAQIITPHGKQPKDGKKPEPCKPILKVEY
KTTRVGDPFMVLSGGLSYDTVGRRACLTVMHGKSTTVLEMDYPIVDFLTLCETPYPNDFQ
EPYAVVVLLEKDLVLIDLGQIGYPIFENPYPLTIHESPVTCCEYFVDCPSELIPALYSVG
SRQKRQSYSKKEWPISGGNWGQGTQSYPEIIITGHADGSIKFWDASALMLQVLYKLKTAK
VFERARSKEEKANTEIVEEDPFAIQTLSWCPESRMLCVAGVSAHVIVYRFSKQEVTTEVV
QLLEVRMQCEFNGGDSPDPGGEQTPTLPTQGASSSPQESEPPTQPSTGSNSSDGPRDNIP
CLQVRSSPLKQSPGYQVELVIQLVWVSGEPPQPITSLAINSSYGLVVFGNTNGLAVADYL
QKTLLLHMGTSELYSPSDPYQRQPRSPRKVRQPSGATCDSNDGSNTSEDRCKSPTSGSTS
PCNSDDERKQKFIEKVKFKSRRFSKTVANDFAKMSRKISSSSEQKTDLAKERSKQWRSLT
CKKHICCANEGKAAAGTTQKGAVSRTESTPNFYARDNTFTRSRSSSVTSIERESREAISS
FHFCESYPRKSDSVVSPCLLVGTTQGTVMMVALSMPPGGDQRLQQPVGISSCGSMVTLKG
GILTMALLDAAGALLPPSYEPWYDPNASDEEKEKSRRRRPASPPSSQDGPDPQFAVLCSE
KQAKVVAMPSQTRIYKHSITETSFVLRADVVQMGGANCIACFCANGHIMTLSLPSLRPLL
DVNYLPLTDMRIARTFCFSHLGQALYLTSPTEIQRLTYSQETCDNRQEMLSELFTPVETP
EAPNRGFFKGLFGGGAQSLDREDLFGETGAGKASRSLAQHIPGQGGMEGMKGAASGVVGD
LARARIALDERGQKLGELEDRTAAMMSSADSFSKHAHDMMLKYKDKKWYQL
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagttcaacattaggaaggtgctggacggtttgacagcggcttcttcttcctcc
tcttcctccgcgaccgcccagccgggctccggcagggacagcgacgtgatccaggagacc
ctccagtcggagcatttccagctttgcaagactgtgcgtcatggcttcccatatcaacca
tcctccatggcttttgatcccgtgcagaaaatcttggccgtcgggactcagactggagcg
ttgaggctctttggctgtgcgggtgtggagtgctactgtcagcacgagagcggcgcggcc
gtcatccagctgcagttcctgatcaacgagggggcgctggtgagtgccttagctgatgac
agcatccacatgtggaacctgaggcagaagatccctgcaatcctgcattctctcaagttc
agcagggagagaatcacgtactgccacctgcccttccagagcaaatggctctacatcggc
acagaaagaggaaacatccacattgtcaacgtggagtccttcacgctctcgggctacgtc
atcatgtggaacaaagccatcgaactatccaccaagacgcacccggggccagtcgtgcac
atcagtgacaaccccatggatgaaggaaagcttctgattggatacgagtgtggggtcgtg
gtgttgtgggacttgaagtgcaaaaaagctgactgccgctacaattatgatgaggcgatc
cactcggtagcctggcaccatgagggtaaacagtttgtctgcagccactctgatggcact
ctgaccacgtggaatatacgaatcccagccaagtctgcacagatcatcacaccacatgga
aagcagcctaaggacggaaagaagccagagccatgcaagcccatcctgaaggtggagtac
aaaacaacaagggttggggacccgttcatggtcctgtccggaggtctgtcgtacgacacg
gtgggcaggagagcctgtctgactgtgatgcacgggaagagcaccaccgtcctggagatg
gactaccccatcgtagattttctaacgctgtgcgagactccgtatccaaacgactttcag
gagccttacgctgtggtggtcctcctcgagaaggatttagtgttaatagacctcggacag
attgggtacccgatatttgagaatccatatcctctgactatccatgagtcaccggtgacc
tgctgtgaatactttgtggactgcccttctgaactcattcctgcactttactctgtcggc
agccggcaaaagagacaaagttacagcaagaaggaatggcccattagtggaggaaactgg
ggccaaggcactcagagttacccagagattattatcactggacatgctgatgggtcgatc
aaattttgggatgcgtctgcattgatgcttcaagtgctgtacaagctgaagactgccaag
gtttttgagagggctcgcagtaaggaggagaaggccaatacagaaatagtagaggaggac
ccgttcgccatccagaccttgtcctggtgccccgagagccggatgctctgtgtggccggg
gtgtctgcccacgtcatcgtctatcggttcagcaaacaggaagtcaccactgaagttgtg
cagcttttggaggtgcggatgcagtgtgagtttaacggtggggactcccctgatccagga
ggggagcagacccccaccctgcccacccagggagcttcctccagcccgcaggagagcgag
cctcccactcagccctccacaggcagcaactcctccgacggacccagggacaatatacca
tgcctgcaggtgcggagctccccgctgaagcagtctccgggctaccaggtggagctggtg
atccagctggtgtgggtgagcggggagcctcctcagccaatcaccagcctggcgatcaac
tcctcctacggcctcgtggtgtttggaaacaccaatggtctggctgtggccgactacctc
cagaaaactctgctcctccacatgggcacgtcggagctgtacagcccatccgacccctac
cagaggcagcctcgctccccacgcaaagtgcggcagccgtctggagcaacctgtgactca
aacgatgggtccaacacctcagaggaccgctgcaaatccccgacttcaggatctacctca
ccttgcaattctgatgatgagcgaaaacagaagttcatagagaaggtgaagttcaaaagc
agacgcttttccaagacggttgccaatgactttgccaagatgtcacggaaaattagctcg
tctagcgagcaaaagactgacctggcaaaggagaggtccaaacaatggcgctctctcacg
tgtaagaagcacatttgttgcgcgaacgaaggcaaggcggcagccgggacgacccagaag
ggggccgtcagtagaactgaatcaacccccaacttctatgccagggataacacgttcacc
cgctcacgtagttcaagtgtcaccagcatagaacgagaatctcgagaggccatctcctcc
tttcacttctgcgagagttacccccggaagagcgacagcgtggtcagcccctgtctgctg
gtgggaaccacccagggcactgtgatgatggtggccctcagcatgccgcccggcggggac
cagaggctgcagcaaccagtcggcatctcctcctgtggcagtatggtcacactcaaagga
ggcattttgactatggccctgttggacgccgctggagctctgctgcccccttcctacgag
ccgtggtacgacccaaatgcctcggacgaggagaaggagaagagccggaggcgcaggcca
gcctcccctccctcgtctcaagacggtccggatccccagttcgctgtgctgtgttcggag
aaacaggccaaggtggtggccatgccctcccaaacccgcatctacaaacacagcatcaca
gagacctcctttgtgctgagggctgacgttgtgcagatgggcggagccaactgcatcgcc
tgtttctgcgctaacgggcacatcatgactctgagtttacccagtctacggcctctgctg
gacgtgaactacctgccgctgacagacatgcggatagccagaacgttctgcttctcccac
ctgggtcaggccctgtacctcacctcccccacggagatccagaggctcacctatagccag
gagacctgcgacaatcgacaggagatgctcagtgagttatttacccccgtggagacacca
gaggctcctaacagaggtttcttcaaaggcctgtttgggggaggagctcagtctctggac
agggaggacctctttggagaaacgggtgctggcaaagcctcccgcagcctggcccagcac
atccccggccaagggggcatggagggcatgaagggtgcagcgtccggggtcgtgggggat
ctggcccgtgcacggatagctctggacgagagagggcagaaactgggggagctggaggac
agaacggctgccatgatgtccagcgcagattcattttcaaaacatgctcatgatatgatg
ctgaagtacaaagataagaagtggtaccagctctga
DBGET
integrated database retrieval system
