KEGG   Cyclopterus lumpus (lumpfish): 117751186
Entry
117751186         CDS       T09199                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
clum  Cyclopterus lumpus (lumpfish)
Pathway
clum03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:clum00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117751186
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:clum01009]
    117751186
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clum03021]
    117751186
Protein phosphatases and associated proteins [BR:clum01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     117751186
Transcription machinery [BR:clum03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117751186
    Little elongation complex (LEC)
     117751186
SSDB
Motif
Pfam: ELL Occludin_ELL Seryl_tRNA_N A_deaminase_N SWIRM
Other DBs
NCBI-GeneID: 117751186
NCBI-ProteinID: XP_034418728
Ensembl: ENSCLMG00005020901
LinkDB
Position
22:20415275..20422650
AA seq 598 aa
MSSLKENRCYGLSGGDRSRAHVSVFHVKLTDSAARAIEDGKGWSSGPTICFNGSKGSISV
PRSENTDELRVFHFGLTNVARDNPNGSFDCFQQRGSGSAEELSCLGVIQKKMTVNATDDS
YEKARQSMTQAEEETRSRGAIVIKQGGRLQGKKVTVRAPGPALAGLTKPRHPDKSRSLLG
GVRRGVVQTAAAAATSKPKRAACASNGKSAGGVQERQLGERLAHLLALRPYKRPEIILRL
QKDGLTASDKDLLDSELMEVGQLNSRDNTFVLKDGLYKELQRDWPGYSSGDQQLLKRIFV
RRLFQPQHNLLAVPEAQVSPLRDTPNSSPAHPPKPPPPEDYTDPLASKKPRISRLSGKTS
GARPAGKRDTLDPRTLFDSLSAVCRRGADVAERLEAPPRAEEGPRVAAPDPPRPAPARPP
SPLAMPELSRHTIKRKKSKHKRRDQEKDRSRARKERSRDLSSEDPNGNVSLYCIEPSEIL
FESGDDAADYLLKYAAISSPVQRQRYKLDFNTEYSEYRDLHARIDGVTRQFMELDTQLKR
LHHESHKYKTVRNQILQEYRKIKKSNPNYNQDKTRCEHLHNKLAHIKKLISEYDRQQL
NT seq 1797 nt   +upstreamnt  +downstreamnt
atgtcgtcgctgaaggagaaccggtgctacgggctgtccggtggcgaccggagccgcgcg
cacgtctccgtgtttcacgtcaaactcactgacagcgcggcgagagccattgaagacgga
aagggctggtcctccggtcccaccatctgcttcaatggcagcaaagggagcatctccgtg
cctcgctccgagaacaccgatgaactgagggtcttccacttcggcctgaccaacgtcgcc
cgagataatccgaacggaagcttcgactgtttccagcagcgcggctccgggtctgccgag
gagctgtcgtgtctcggggtgattcagaaaaagatgacggtcaacgccacggacgactcg
tacgagaaggctcgccagagcatgacccaggccgaggaggagacgcgcagccggggcgcc
atcgtcatcaagcaggggggccgcctccagggcaagaaggtgacggtccgcgccccgggc
cccgcgctggccggcctgaccaaaccccgacaccccgacaagtcccggtctctcctcggc
ggcgtcaggaggggcgtcgtccaaaccgccgccgccgccgccacttccaagccgaagagg
gcggcctgcgcttccaacgggaagagcgcgggcggcgtgcaggagaggcagctcggggaa
agactggcgcatctgctcgcccttcggccgtacaagaggcccgagatcatcctgaggctg
cagaaggacggactgacggcgagcgacaaagacctgctggactcggagctcatggaggtg
ggccagctcaacagcagagacaacacgtttgtcctgaaggacggcctctacaaggagctg
cagagggactggccgggctactcctccggagaccagcagctcctgaagaggatcttcgtc
aggaggctgtttcagccgcagcacaacctcctggctgtcccggaggcccaggtcagtccg
ctacgagacacccccaactcctccccggcgcacccccccaagccgcccccgcccgaggac
tacaccgaccctttggcgagcaagaagccccggatatcacgcctgtccggcaaaacgtcc
ggagcgaggcccgccgggaaaagggacacgctggacccccggacgcttttcgactccctg
tcggcggtctgccgacggggagcggacgtggccgagaggctggaagcaccgccccgtgcc
gaggagggaccccgggtcgcggcgccggacccccctcgacccgcccccgcccgccccccg
tcccctctggcgatgcccgagctgagcagacacacaatcaaaaggaagaagagcaaacac
aaacgcagagatcaggagaaggatcggtcacgagcccggaaggaaaggagtcgagatctc
agttcagaggatcccaacggcaacgtctccttgtactgcatcgagccgagtgagatattg
tttgagtccggcgacgacgcagcggactatctcctgaagtacgcggcgatctcgagcccc
gtccagaggcagcgctacaagctggacttcaacacggagtacagcgagtaccgagatctg
cacgctcgcatcgacggcgtgacgcggcagttcatggagctggacacgcagctcaagagg
ctccaccacgagtcccataagtacaagacggttcgtaatcaaattcttcaagagtatcgc
aaaatcaaaaagtccaaccccaactacaaccaggacaagactcgctgtgaacacctgcac
aacaaactggcccacatcaagaagctcatatcggagtacgaccggcagcagctctga

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