Cyclopterus lumpus (lumpfish): 117751198
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Entry
117751198 CDS
T09199
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04805
nicotinic acetylcholine receptor alpha-3
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum04080
Neuroactive ligand-receptor interaction
clum04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117751198
04082 Neuroactive ligand signaling
117751198
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clum04040
]
117751198
Ion channels [BR:
clum04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
117751198
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
117751198
NCBI-ProteinID:
XP_034418759
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All DBs
Position
3:21346249..21353077
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AA seq
504 aa
AA seq
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MSQLVKVDELNQIMETNLWLRHIWNDYKLRWNPKDFGGVEFIRVPSNRIWKPDIVLYNNA
VGDFQVDDKTKALLRYNGDVTWIPPAIFKSSCKIDVTYFPFDYQNCTMKFGSWTYDKAKI
DLVLIGSTINLKDFWESGEWTIIDAPGYKHDIKYNCCEEIYTDITYSLYIRRLPLFYTIN
MIIPCLLISFLTVLVFYLPSDCGEKITLCISVLLSLTVFLLVITETIPSTSLVIPLIGEY
LLFTMIFVTLSIVITVFVLNVHYRTPKTHTMPCWVQTVFLGLLPRVMFMTRPERDPEKVA
AAAAAGNVQAMHSRPCAVHSSGTLQKQHRPQAMSCSVVSGLTNRQRLFNNTDLSNLNNLS
GDPAKGAGSALLCCEGRCNCRWHQRSSQLPADSRGGSGGLGSLGALTGGSAVGFGVGSQC
SSSESLEGGILSLLPLSPEVREAIDSVKYIAENMRLQNEAKEVQDDWKYVAMVIDRIFLW
VFVLVCILGTAGLFLQPLLLWDDI
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtcacagctggtcaaagtggatgaactcaatcagatcatggagacaaatctgtggctg
agacatatctggaatgactacaaactcagatggaatccaaaggactttggaggcgtggag
tttatccgagtgccatccaacaggatatggaagccagacattgtgctctacaacaatgcg
gtcggagatttccaggttgatgacaaaaccaaggccctccttcgttacaatggtgatgtc
acttggatccctcctgccatattcaagagctcatgcaagattgacgtcacttacttcccc
ttcgactatcaaaactgcaccatgaagttcggctcctggacgtacgacaaggccaagatc
gatctggtgctcattggctcgaccatcaacctcaaggacttctgggagagcggcgagtgg
acgattattgatgcccctggttacaaacatgacattaagtacaactgctgcgaggaaatc
tacacggatattacttactctttgtacattcgccgtctgccacttttctataccatcaac
atgatcatcccctgcctcctcatctccttcctcaccgtgctcgtcttctacctgccgtct
gattgcggtgaaaagatcactctgtgcatctccgtcctgctgtctttaactgtcttcctc
cttgtcataacggagaccatcccctccacctcactcgtcatccccctgattggcgagtac
ctcctcttcaccatgatctttgtcaccctctctattgtgatcactgtttttgtgctgaac
gtccactaccgcacgccaaagacccacactatgccctgctgggtgcagactgtgttcctg
gggctgctgcccagggtgatgttcatgacgaggccagagagggaccctgagaaagtggcg
gcggcggcggcggccggcaatgttcaggcgatgcattcaaggccctgtgccgttcattcg
tcaggtactctgcagaagcagcacagacctcaggccatgtcctgtagcgtggtgtccggc
ctgacaaaccgccagcggcttttcaacaacacagatctctcaaacctcaataacttaagt
ggagacccggcaaaaggtgcaggctcagcgctcttgtgctgcgagggccgttgcaactgc
cgttggcaccagagatccagccaactgcctgcagactccaggggagggagcgggggactg
ggcagcctgggggcgctgactggaggcagtgctgttgggttcggagtggggagtcagtgc
tccagctccgagtctctggaaggaggaatactgtccctgttgccgctctcccctgaggtc
cgggaggctattgacagtgtcaaatacatagcagagaatatgagactacagaatgaagca
aaggaggttcaggatgactggaagtacgttgccatggttatcgacagaatcttcctctgg
gtttttgtccttgtgtgcatcctgggaacagctggcctcttcctccagcctctattactt
tgggatgacatttga
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