Cyclopterus lumpus (lumpfish): 117751226
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Entry
117751226 CDS
T09199
Symbol
rtf1
Name
(RefSeq) RNA polymerase-associated protein RTF1 homolog
KO
K15178
RNA polymerase-associated protein RTF1
Organism
clum
Cyclopterus lumpus (lumpfish)
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117751226 (rtf1)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
117751226 (rtf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plus-3
Motif
Other DBs
NCBI-GeneID:
117751226
NCBI-ProteinID:
XP_034418798
Ensembl:
ENSCLMG00005005122
LinkDB
All DBs
Position
22:complement(17584032..17592453)
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AA seq
717 aa
AA seq
DB search
MLSPAFVWLTAEPTSSVLAAAANLKHLDDTEVASRLAAQLIMVNVKKRKGRVVIDSDSED
SASDDNLDQELLSLAKRKRVDSGDQEEPVSKPAASTDSETSDSDDEWTVGGTKGKKKVKP
GKGSEKKNATKKKVNKATASGSSDGNSSAESSAPEEGEVSDSESNSSSSSSDSDSSEDEV
FRDGYDDDLMGDAEDRARLEQMTEKEREQELFNRIEKREVLKRRFEIKKKLKTAKKKEKE
EKKKKQEEEQEKRKLSQVQDTQVVMSHNKERRTKRDEKLDKKSQAMEELKAEREKKKNKT
AELLSKRQPLKTSEVYSDDEEEEEEDDDKSSIKSDRSSRSSSYDDDDKDETPPKSQPVSL
PDELNRVRLSRHKLERWCHMPFFAKTVTGCFVRIGIGNSSSKPVYRVAEIVDVVETAKVY
QLGTSRTNKGLQLRHGGDTRVFRLEFVSNQEFLESEFMKWKEAMIVAGMQVPTLDEITKK
EQSIKEALNHKFNDKDIEDIVKEKDRFRKAPANYAMKKTQLLKDKAMAEEIGDNDKVKKI
QDELNELEERAEALDRQRTKSISAISYINQRNRSWNIVESEKALVAEGQNAKNQQMDPFT
RRQCKPTMVSNARDPSVHAAILAHLNQKYGSGSSTDICDDINKLGQLNSKDKDGPKPDTD
LSEDLFKVHDFDVKIDLQVPNAEAKSLSVSSNALPVKDGAPRRSLNLEDYKKRRGLI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgctcagtcctgcctttgtgtggctgactgcagagccaactagctcggtactagcagcc
gcggctaacctcaaacatttagacgacacagaggtagctagcaggttagccgcgcagcta
atcatggtgaatgtaaagaagcggaaaggtcgagtcgtgattgactctgactccgaggac
agtgctagcgacgataatttagatcaggagctcttgtctttggcaaagaggaagagggtg
gattctggtgatcaggaagagccagtgagcaaacctgcagcttccacagactccgagaca
tccgatagtgacgatgagtggactgtgggtggcaccaaaggcaaaaagaaggttaagcca
ggaaaagggtctgagaagaagaatgcaacaaagaagaaggttaataaagcaacggcgtct
ggcagctcagatggaaacagctcagctgagagctctgcaccagaggagggtgaggtgtcc
gattccgagagcaacagctcgtcctccagctccgactcggactcctctgaggacgaggtg
ttcagggacggttacgacgacgacttgatgggagacgcggaggacagagctcgcctggag
cagatgaccgagaaggagagagagcaagagctgttcaacagaattgagaagagagaggtg
ctaaagagacgttttgaaatcaagaaaaagttgaagacggcaaagaagaaggagaaagag
gagaagaaaaagaagcaggaggaagagcaagaaaagaggaagctatctcaggttcaagac
acacaagtggtgatgtcacacaacaaagagagacgaaccaaacgcgacgaaaaacttgac
aaaaagtcccaggccatggaagagctcaaagctgagcgcgagaagaagaagaacaaaaca
gccgaactgttgtccaagcgccagcccctgaagaccagcgaggtttactccgacgatgag
gaggaagaggaggaagacgacgacaaatcgtcaatcaagagcgatcggagttcccgttca
tcgtcttacgatgacgacgataaagacgaaactccaccgaagtcgcagcctgtttcacta
ccggatgagctcaacagggtccgcctgtccagacacaagctggagcgctggtgccacatg
cccttctttgctaagactgtgaccggctgctttgtgaggatagggatcgggaacagcagc
agcaaaccagtttatagggttgctgaaattgtggacgtggtagagacggcgaaggtttac
caacttggaacatcgcgaacaaacaagggattacaattaaggcatggcggtgacacgcgg
gtgttcaggcttgagtttgtatcaaatcaggagtttctggaaagcgagttcatgaagtgg
aaagaggcgatgattgttgctggaatgcaagtaccgactctcgacgagatcaccaaaaag
gagcagtccatcaaagaagctctgaaccataagttcaatgacaaagacatagaggatatt
gtaaaagagaaggaccgattccgaaaagcgccggcgaattatgccatgaagaaaacgcag
ttactcaaagataaggccatggcagaagagattggagataatgacaaggtgaagaagatc
caggatgagctgaacgagctcgaggaaagagcggaggccctggacagacaaaggaccaag
agcatctctgccatcagctacatcaaccagaggaacagaagctggaacattgttgaatct
gagaaagctcttgtggctgaaggacaaaatgccaaaaaccaacaaatggaccccttcaca
cgaagacagtgcaaaccaaccatggtgtctaatgccagagacccgtcagtccacgcagct
atcctggctcacctgaaccagaagtacggctctgggtcatcaacggacatttgtgacgac
ataaacaaactggggcaactaaactcaaaagacaaggacggccccaagccggacacggac
ctctcagaggacttgtttaaagttcatgattttgacgttaagattgacctccaggttccc
aatgcagaggcgaaatctttgtccgtgagctccaacgcgctgccggtgaaggacggagct
ccccggaggtccctcaacctggaagactacaagaagaggagggggctgatctga
DBGET
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