Cyclopterus lumpus (lumpfish): 117751238
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Entry
117751238 CDS
T09199
Symbol
mnat1
Name
(RefSeq) CDK-activating kinase assembly factor MAT1 isoform X1
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03022
Basal transcription factors
clum03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
117751238 (mnat1)
09124 Replication and repair
03420 Nucleotide excision repair
117751238 (mnat1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clum03021
]
117751238 (mnat1)
03400 DNA repair and recombination proteins [BR:
clum03400
]
117751238 (mnat1)
Transcription machinery [BR:
clum03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
117751238 (mnat1)
DNA repair and recombination proteins [BR:
clum03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
117751238 (mnat1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_UBOX
zf-C3HC4
TRAF3_RING
zf-UDP
Lant_dehydr_C
Xol-1_N
zf-RING_2
zf-P11
TRAF6_Z2
Motif
Other DBs
NCBI-GeneID:
117751238
NCBI-ProteinID:
XP_034418825
Ensembl:
ENSCLMG00005012917
UniProt:
A0A8C2ZF78
LinkDB
All DBs
Position
22:11544173..11575803
Genome browser
AA seq
311 aa
AA seq
DB search
MDDQGCPRCKTTKYRNPSLKLMVNVCGHTLCENCVEMLFARGSGNCVQCDTPLRKSNFRV
QLFEDPAVDKEVEIRKKVLKIYNKRDFDFPSLREYNDYLEQLEDTVYNLTNNIDVENTKL
QMEQYQKENRDLIQKNKVKLTREQEEVEELILLEQQGNEQRRLDLLQEEQRQLQAKRKNK
QALLDELEQSQLPATILLAQHKVRAAKLETQIEQQKQAVKPTSLFSTGIHMHQTVSLQPP
PKIEEVLYHYKPLQVVTYGPPVPELEQLGRLGYLNHVRAAMPQDTAGGYTSALACHRAIQ
DAFSGLFPLKR
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggacgaccagggatgtccgagatgcaaaacaaccaaatacaggaatccgtcgctgaag
ctgatggtgaacgtctgcggtcacacgctatgcgagaactgtgtggagatgctgtttgcg
cgtggctcgggtaactgcgtgcagtgtgacacacccctgaggaagagcaacttccgcgtg
cagctcttcgaagacccggccgtagataaggaggtggagattcgcaagaaggtgctgaag
atatacaacaagagagattttgacttccccagtctgagagaatataacgactacttggag
caattggaggatacagtgtataacctgacaaacaacattgatgtggagaacaccaagctg
cagatggagcagtaccagaaagagaacagagatctcatccagaagaataaggttaaactg
acaagagagcaggaggaagtggaggagctgatcttgttggagcagcagggcaatgagcag
cggagactggatttgctgcaggaggagcagaggcagctccaggccaagaggaagaacaag
caggctctgctggatgaactggagcagtcccaacttcctgccaccatcttgctcgcccaa
cacaaggtccgtgctgccaagctggagacccagatagagcagcagaaacaggcagtcaaa
cctaccagtctattctcaactggaatccatatgcatcagacggtgtctcttcagcctcct
cccaagatagaggaagttctgtaccactacaagccccttcaagttgtgacatacggaccc
ccagtgcctgaactggagcagctgggcagacttgggtatctgaaccacgtgcgggctgcc
atgcctcaggacacagctggaggatacacctcagctttggcatgtcatcgagctattcag
gatgctttcagtgggctgttccctctgaaacgctga
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integrated database retrieval system
