Cyclopterus lumpus (lumpfish): 117751243
Help
Entry
117751243 CDS
T09199
Name
(RefSeq) transformer-2 protein homolog alpha-like isoform X1
KO
K12897
transformer-2 protein
Organism
clum
Cyclopterus lumpus (lumpfish)
Pathway
clum03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clum00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117751243
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clum01009
]
117751243
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clum03041
]
117751243
Protein phosphatases and associated proteins [BR:
clum01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117751243
Spliceosome [BR:
clum03041
]
Common components
Common spliceosomal components
SR proteins
117751243
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
Presenilin
Motif
Other DBs
NCBI-GeneID:
117751243
NCBI-ProteinID:
XP_034418833
LinkDB
All DBs
Position
22
Genome browser
AA seq
336 aa
AA seq
DB search
MFFYLCTFLALTETNLPYHPCLFFVKVEVGRKKKAEDVSDDSRPGSRSASPRGSAKSTSR
SPAGSKDGSRRSRSRSRSRSKSKSRSRSHRSSRRHHSRSRSRRHSRSRSRSWEYRRHRSH
SRSPMSNRRRHIGNRANPDPHNCLGVFGLSLYTTERDLREVFSKYGPLSNVNIVYDQQSR
RSRGFAFVYFENCEDSKEAKERANGMELDGRRIRVDFSITKRAHTPTPGIYMGRPTYGGG
GGSGGGEGGGGGGGGGGGGGGGGSGSGGSSSGGSSRRASRDYDRSYDRGYDRSYDRDYDR
YDDREYRSYKRRSPSPYCSRGYRSRSRSRSYSPRHY
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttatttgtgtacctttttggctcttacagaaaccaacttgccttatcaccct
tgtttgttctttgttaaggttgaggttggaagaaagaaaaaggcggaagacgtgtcagat
gactcacggcctggttctaggagtgcgtcccctcggggttcagcaaaatcaaccagccgc
tcaccagcaggctcaaaagatggctcccgccgctccaggtcgagatccagatccagatcc
aaatccaaatctaggtcccgttcccatcgaagctcacgcaggcatcattcccgctctcgt
tcccgacgccattccaggagccgatctcgtagctgggagtatcgccggcataggagccat
agccgttcccccatgtcaaatcgccgcagacacattggcaacagggccaacccagaccca
cacaactgtctgggtgtgtttggactgagtctgtacacaacggagagagatctgagggag
gttttctctaaatacggccctttgagtaacgtcaacattgtgtatgaccagcagtcacgt
cgctcaagaggctttgcctttgtctactttgaaaactgtgaggactccaaggaggctaag
gagcgtgccaatgggatggagcttgatggccgaaggatccgagtggatttctccatcaca
aaaagggcccatacacccactcctggaatctacatgggacgtcccacatatggtggtggt
ggtggtagcggcggaggagaagggggaggaggtggaggaggtggaggaggtggtggaggt
ggtggtggtagcggcagcggtggtagcagtagtggtggttcatcgcgacgtgcctctaga
gactatgaccggagctacgacagaggctatgacagaagttatgatcgtgactatgatcgc
tatgacgacagagagtacagatcatacaaacgcagatctccatctccttactgtagcagg
gggtaccgctcacgatcccgatcacggtcctactcgccacgtcactactga
DBGET
integrated database retrieval system
